Array 1 1209032-1207597 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP074379.1 Lacticaseibacillus zeae strain FBL8 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 1209031 32 100.0 34 ................................ CTGACATCGATCTCAACTGGAATTTACGCAAACT 1208965 32 100.0 34 ................................ TTTTCTGGTGCTTGGGACAAGCTGGAGGCCGTTG 1208899 32 100.0 35 ................................ TGGGAACGCTGCTGACTTACACAATAGTGACTAAC 1208832 32 100.0 34 ................................ TTGGTGATAATTACATGCTGGAGTTTGTCGGTGG 1208766 32 100.0 35 ................................ CCAGTAGGTTACTACCACTACGAGCAATGGCTAAG 1208699 32 100.0 34 ................................ TGCCATCGACATTGCTTTACCTGGGCGTCTAATA 1208633 32 100.0 33 ................................ TTATTGTGCAAGCGCACGCAATGACAATATTTC 1208568 32 100.0 36 ................................ ATTACCTCTTTTAACGGACGCCCTAAAACCCCGGAA 1208500 32 100.0 35 ................................ TTCGTATTTAAATAAGTTTAAATAAATCTTGTTTT 1208433 32 100.0 35 ................................ TCAAGATATGGGCTTGAATATTGATATGAGTGGTC 1208366 32 100.0 34 ................................ TCCGAAGATAACCATTTCTGGTACATATCCTCGT 1208300 32 100.0 34 ................................ CCCGTTAGGGTAATGGATATGCAAACGCATAAGC 1208234 32 100.0 36 ................................ AATAACAGCATTCAGAATCGCGTTTGAATCTGCACC 1208166 32 100.0 35 ................................ AATCTCACTTACCTCCACTCTCGGATTGACTTTGT 1208099 32 100.0 35 ................................ ATAGTCGCCGGCGCGGAACCGATTATTACTAAACT 1208032 32 96.9 34 .........C...................... ACATCTTCTTAATGAGTTGATTGAATTTTGCTTT 1207966 32 100.0 34 ................................ TCCCGGCCTTAGCACCGCCGTGTAATAACCACGA 1207900 32 96.9 37 ......C......................... CAGGAACTTGTGCTTAACGTTGTCGTAAATGGATCGC 1207831 32 100.0 36 ................................ AAATTGAGCCATTGACCGCCCTTGCGTGTGCTCACC 1207763 32 100.0 36 ................................ ACTCCAAAATACCTGTCTGGTCTCGTTGGTGTCTGC 1207695 32 100.0 35 ................................ CGCAACTAAAGGCACATCTGCGGATGGGCAAGGAG 1207628 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ===================================== ================== 22 32 99.7 35 GTCGCAGTCTACGTGACTGCGTGAATTGAAAT # Left flank : TATGTAAGTACATTGTCTTTCCAGGCTTGTTCAATATGAATAAGTGCCCATTGACGTTTGTAAAAAACGAAATGCTGAATGCCGGATATTAAAAGCCAATCCTCTTCTGAATAATACAATTGAGTCACCTCCAAAGCAGCTATTAAATTCGCCTATGCTCATTATTTCACCTATCGTCTTTGATTACCAGCATAAGAAGTCAAAAATATAGCGCTTACAAGTTTGTGGCCAAAAGCTTTTTCAAAATTTAGTTGATCATATCAGGCAGGCATTGAAGATACGTTAACGTACTATGGTATATTGTTATTGAAGAACAACATGTTTTCGACAATGAAGGTCTGAGTGCGAATGTAGGGCACACATGAAATCGCCGGTACATTCGCACTCCTGTTGTTAAGTATATTTCGCAATTTGACTTGCTCTTTGCTTTTCTTGTGTTTTATAAATAGTTCCAGCCACAACATATTCGTGTTATGTGTTAGGAAACACATTATGTTGCG # Right flank : AGGATTGATTATAGCGGCAATTAAGTCTCGTAATCCTCATAATTACATGAGCTAAAATACGCCCTTTGAAGAAGCATATGGGGGTTAAATCATTCCAATTAAATGGGATGCGCAAAGCAAAATTATTGCTTGAAGCCTGCACTTTCTCCGCAAAAAAACCAGCATGAAACCCGACTGGAAGTCTGGCACATGCTGGCTTATTTGCTTGGAATGTCTGCTGAATTTACCTACAAATCCTTTCGCCATAAAGCTAAAACCGACAAGATAATAGCAGTCATCAAAGTTGTCTACAGCTCATATCGTTAATAGTTCATACAGTTAATTTCTTTAGATATCTTGCGATTTTTAATATAGTGTTAGTCTTTTTTCACCCATCCGTGACACTATGCGGCTTGCCCTCAACCCTGAGTACCTCTTCAACACTAGGCCGCTCACGCATTGATTCGTCAAACGCCCGTAGCTTTTGCAACCCATCAAACGAAAAGCCAAGCCGTCGCATC # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCAGTCTACGTGACTGCGTGAATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: R [matched GTCGCAGTCTACGTGACTGCGTGAATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.60,-3.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 1217948-1221324 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP074379.1 Lacticaseibacillus zeae strain FBL8 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ======================================= ================== 1217948 32 100.0 37 ................................ TTCTAGGGGGAAATAAGGCAGCAAATGGCTGTAACCC 1218017 32 100.0 35 ................................ TTGATGAGTCGCATCGACTTGTCACAGATTGCCAG 1218084 32 100.0 35 ................................ AGGGCAAGACGTACACCGTGCAGCAAGTATCTGGA 1218151 32 100.0 36 ................................ TGGAGTATTGCCAGCAAGTACGGTATCAGTATGTAC 1218219 32 100.0 36 ................................ ATTAATCATCCACAATCGTTCGATATAATCCGTGTT 1218287 32 100.0 35 ................................ ACCACTAATAACAGCCTTGCTTACTAATTCAATAT 1218354 32 100.0 34 ................................ TTGATAGTAATTACCAACAGCCTGAGTAACTCCG 1218420 32 100.0 34 ................................ AAGATTGAGACGAACTAGCCCGTGATCTGGAAAG 1218486 32 100.0 33 ................................ AACGGTCAAGAAGTATCCGTGACAAGCGGAGAA 1218551 32 100.0 33 ................................ CATCAAATAAGCAGCATATTCACTTGGCTCGAT 1218616 32 100.0 39 ................................ GTCATAGTGATAGTTTCTATTTTGACTAAGAAAAATCTC 1218687 32 100.0 36 ................................ GATATGCTATGAATGCCATCATATGATTTGCACCAT 1218755 32 100.0 34 ................................ AATGTAGCAATGATATTGATACTGACTTGCTATT 1218821 32 100.0 36 ................................ TGGACGAAGGGCTGATAAAGCGAGATCCAACCTTGC 1218889 32 100.0 36 ................................ GTGTTAGCTGCTCCTAGACCCTCTGTAATTAGATCC 1218957 32 100.0 35 ................................ CTTGTATGGCTTGAATAACGGCGCTCTTGGCTAGG 1219024 32 100.0 36 ................................ CGTTGTAGCAACCTATGACGCAGGAGAAACGCTCAA 1219092 32 100.0 34 ................................ ATGTCGTACAGACGATCTAGCCGCCATTGGAGCA 1219158 32 100.0 32 ................................ TTGTACCGCGACTACTCCCGTGAGAAGATATA 1219222 32 100.0 33 ................................ AAGAAGCCGCCAAACAGCTTAATGACGATCAAA 1219287 32 100.0 34 ................................ ATGGACGTTCAGTGCCAATACCAACATTCGTACC 1219353 32 100.0 34 ................................ AAGACAACAACATCACCTTAGCCAAGCTAGATGA 1219419 32 100.0 33 ................................ TAGGAATGATACTCATAGTTATTGGCGCCATTG 1219484 32 100.0 34 ................................ CTTACCGCCAAAAAAGTCGTTAATGCTTGCTATT 1219550 32 100.0 36 ................................ TTGTCCAGCCAGGTGATGGATGCTCTGGAACGTTCG 1219618 32 100.0 36 ................................ AATCAGTTGCGCATTAGCGTTGGCTTCGTTAGATAC 1219686 32 100.0 34 ................................ TCACCAAACTAGTAACAAACTTTAACCAAACTTG 1219752 32 100.0 36 ................................ GAAGCGCCAAAACTAGAAACGGCCTTGCGGAATGGG 1219820 32 100.0 36 ................................ CAGTAAGATATTCGCATGAAAATACTATCAGTATCG 1219888 32 100.0 34 ................................ TAACGGTCGTTGCTCGTTTGGTTTGGCGTGACGG 1219954 32 100.0 34 ................................ TAACAACCAGCAAAGTAGACCAGTTGGCCGTTTG 1220020 32 100.0 35 ................................ AACATCGACATAAGCCGGCAAAACCTGACCAGCAA 1220087 32 100.0 34 ................................ AAGATTCATGCTGATGTTGCTTCGGGTACAAATC 1220153 32 100.0 34 ................................ CCGATAACGCTGACGATAAAACAGTAACATGGAA 1220219 32 100.0 36 ................................ TTACCATTTACATGTAGGTATTACTAAAATGGACTT 1220287 32 100.0 34 ................................ CAACACAGACGGGTCAAAACGTGTGCTATTGGTG 1220353 32 96.9 34 ........................T....... CATAAAAGACGCGGTTAACTTGTGTATCGGCAAG 1220419 32 100.0 36 ................................ ATAGATGGTTTTAGTTTTATAGTTACGCGTTTCCGT 1220487 32 100.0 38 ................................ AGGACCTCTTCAAGAGCAAATGAAGAAAAACGGGGCTT 1220557 32 100.0 38 ................................ AGGACCTCTTCAAGAGCAAATGAAGAAAAACGGGGCTT 1220627 32 100.0 35 ................................ GTGGAATCCAAAGCTGACTAAGGACGTTGAGATCG 1220694 32 100.0 34 ................................ TTCTGCCAGTAGACTGAGAATCGCATACCGCTTT 1220760 32 100.0 33 ................................ TTTTTTATTGCGGCTAGTCGCTTGTTTAATGCC 1220825 32 100.0 35 ................................ TTTTTGTGCAGAATTCAGACGCGACTGAAATAACA 1220892 32 100.0 36 ................................ TGGAAAAATAATGAAATGCCTAACCCATTTATGCAA 1220960 32 100.0 35 ................................ TTGTTGCCAAAAACATTGTAGTAACGCTTGGCCGG 1221027 32 100.0 34 ................................ TAATAAGGGTATTAAGGAATCTACTGAGGAGAAC 1221093 32 100.0 34 ................................ TTGAATGTCATTATATGCTTTTACGCCGATGAGA 1221159 32 100.0 35 ................................ TTGTTGGCGATAGCCTCAAGACTGTCAGCCACGTT 1221226 32 96.9 35 ...............G................ GAAAAGACTAGCACGGCGCTCGGTAAGGTTAATGC 1221293 32 84.4 0 ....T......T..........T.T.....T. | ========== ====== ====== ====== ================================ ======================================= ================== 51 32 99.6 35 GTCGCAGTCCACGTGACTGCGTGAATTGAAAT # Left flank : CGACTATTAAAACAGGCTCAACAGTACGTCGTTCAAGTATTTGGTGATCAGCGTACTAGCGAAAACTTGGTTAAAAACGGTGTTGCACGTTTCGATGAGCATACGGGATTATGGATAGCCAGAGAAAGTCAATATGACGAAGATTTTGGATTGGATACAACGGACAAGGCCATGAACTATTTTGTATAATTAACAATCTTAAGTTGAAATTTAGATAACTTGATTTGTTGTCGAAGTTTCAAGGACAGGGTAATCTGAAGTGAGCGGTATTCAGTTGAATTGAAAACTGCTTTCTGGTGACAAGATGATTTCTAGCATCACTTTTTGTAATGCCTTCCCTTGGTGCGAATGGTGGGTAAACATATAAACCCGGGGAGATTCGCACCAGATTTATATCTGAAAGTACCGTGTTGACGTTTTATCTAGACTTTTTGATGTGTATAGTTAAGCACCAGCCGCAAGATGTTGTGATCTTTAGGCTTTTTGTGCAATATCTTGCG # Right flank : TTCTTATGATCTTAAGGTTGGTGGAGCACAATTTTTAGTCCACATGGCTACATGAATTACAACTCGCGACTGTCTGAACCAAAACAACGTTGCAGTTAGGCGTTTTGATAACTACCTGCAGCGTAGTCCTCGTAATTGAGTGCCTCGAGAATAACAACAATACTCAATAACGGTGATTTTAAAAATGGCCTCTTCCAATAACAGGGAAAACGCCATTTTATTATATTGAACATTGAATTACATATCGACCATGATTAACATCTGTAAATCAACAATCTCACAGGAAAATACGCCGTTCATTCGTGCACTTTGACAGTTTGATGATCTTGAAAATATGCGTGGGTTATCTCTCTCCAGCGTGTTTCATGAAAGACGGCTGCCTGATAAGGGTTAAGACCATATGTGCCAAGGGAGAAGCCATCGTTTGCCTCAACGACTAAAGTACGATTATCTGCTGTAACACCAATATCAATGGAACACGTGTTTGGTGCTTCTTTCCA # Questionable array : NO Score: 9.24 # Score Detail : 1:0, 2:3, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCAGTCCACGTGACTGCGTGAATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [8,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCAGTCCACGTGACTGCGTGAATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-5.40,-5.30] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.41,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //