Array 1 4538-5536 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_FWPB01000024.1 Klebsiella pneumoniae strain VRCO0425, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	=============================	================================	==================
      4538	    29	 100.0	    32	.............................	ATCAGCCTGCGGGGTTCGGAGCTGCGTGTCTC	
      4599	    29	 100.0	    32	.............................	GAAACTATTTCGGAGCATCTCATTGCTGAGGG	
      4660	    29	 100.0	    32	.............................	TGGTGCTCTCAACCGTCACCCGCTGGCTGGAA	
      4721	    29	 100.0	    32	.............................	TCGTGTTGTCCACGGTTACCCGCTGGCTGGAA	
      4782	    29	  93.1	    32	............CA...............	AGGTATTTGACCTCATCCAGAAAGGCACAGAC	
      4843	    29	  89.7	    32	............CA..............C	CTTAGAGAAGCAAAAAAACCACCGAGGCAGGG	
      4904	    29	 100.0	    32	.............................	TTACCAATGGGGAAAAATCTTCATTTGTAAAT	
      4965	    29	  93.1	    25	............CA...............	AACATCAGTGGAAATCCACTGCGGC       	Deletion [5019]
      5019	    29	  89.7	    32	......T.....CA...............	AGCAGTTCGAGGAATAGTGACAGGCAGTGCAG	
      5080	    29	 100.0	    32	.............................	TTAATGTTTTGTTAATTTATGAGTGTGGTGAT	
      5141	    29	  93.1	    32	............AC...............	AGCAAATCGAAAATCCGGCTGTTTGAAAAATG	C [5146]
      5203	    29	  86.2	    32	............CT.A............C	CATGAGCCTGCGCACTCTGACGCGCACCTGCT	CC [5208]
      5266	    29	  93.1	    32	............CA...............	CCGACCCGGTGCCCAGGAGAACTGGCTGAATA	
      5327	    29	  93.1	    31	............C..A.............	TTCCCTGCACTAAGACGCTGGTGGTCGCCAC 	
      5387	    29	  86.2	    32	...C........CA............T..	CCGGTTCGGATTTTGCGAAACAGGTGCAGGGC	
      5448	    29	  93.1	    32	............CT...............	GGCATGAGCGAGAACCACTGCGAGAGTGTGGT	
      5509	    28	  79.3	     0	........T.A.CA........-.....A	|                               	
==========	======	======	======	=============================	================================	==================
        17	    29	  93.5	    32	GTATTCCCCCCGTGTGCGGGGGTTATCGG	                                	       

# Left flank :   GATAAAGACACCAAAGCTGAGCTTCAAATCAAAGTACGGGAGCTCGATGAAAAAATTCAGGCCCGCAAAGATCAGAAGCAGGAATCTCGCGAGTCAATTCGCCGCCCGATTGACCCGTATGAAGCGTTTATCACCGGCGCAGAACTCAGCCATCGCATGAGTATTAAAAATGCGACTGATGAGGAAGCAGGGCTTTTCATTTCTGCATTAATCCGCTTTGCAGCCGAACCACGTTTTGGCGGTCATGCGAATCATAACTGCGGTCTGGTGGAGGCTCACTGGACAGTTACGACCTGGAAGCCGGGTGAACTGGTACCAGTTACACTTGGAGAAATCGTCATCACACCGAATGGTGTTGAGATTACCGGGGACGAGTTGTTTGCTATGGTAAAGGCATTCAATGAAAATCAATCTTTTGATTTCACTGCCCGCTAACTCCAAAAGCTGGTGGATTTTAGTGGCGCTATTTAATATTTTATAATCAACCGGTTATTTTTAGA
# Right flank :  ACATAGAAACCGCAATGGTGGGGCTTTTGTCATGTGCCCCTACAAGCAGATGGGACTTTTTACAATCAAGGAAAGTTACTTTCCTGGATAACCCACTTTCTGCCATCTTTTGTCTCAAAGGGTACTCCCACCGTGGCAGGTGGGAGGGGAATTTGAATTGACGCGATAGCGTTAAAGAAACATTTAGCCGCGCTGGTGCTGAATGTAGCGCTTTACGACTTCCAGCGGTGCTCCACCACATGACCCAACAAAGTAGCTGCGTGACCAGAGAACAGGCTTACTGTACGCCTCCCGCAAATCCAGAAATTCATTCCGTAGCCGCCGACTTGTGACGGCTTTCAGGCTGTTAACCAGTTTTGACAGTTGCACAGTTGGTGGGTATTCGACCAGCATGTGAACAAACAGTTTTAAACAGAACCAAAGCAGACTGGCAAGGTTACAGCGCCAGCTTGCCCGTAAAGTGAAATTCAGTGCGAACTGGAAGAAGCAGAAAGCAAGAA

# Questionable array : NO	 Score: 5.45
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.68, 5:0, 6:0.25, 7:-0.01, 8:1, 9:0.53,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTATTCCCCCCGTGTGCGGGGGTTATCGG
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [2,8] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GTATTCCCCCCGTGTGCGGGGGTTATCGG with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-12.10,-12.70] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [5-25] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [70.0-51.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.18,0.74   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
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