Array 1 1948487-1951262 **** Predicted by CRISPRDetect 2.4 *** >NC_008709.1 Psychromonas ingrahamii 37, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 1948487 29 100.0 32 ............................. GTTATAGATTGGCGGGGGGATTCTAGGGACAC 1948548 29 100.0 32 ............................. ACAAATTTTGTGCGGCTTGACCTGCTTTGCGG 1948609 29 100.0 32 ............................. TAAAATCACAGAGTCATGGTTCGCTGGTCCTC 1948670 29 96.6 32 ............................T CGCGTTGCCGCCGTAAAAATGGTTATCATAGT 1948731 29 100.0 32 ............................. CCTTTTAACTTCGCTCTGTGTTCTGGATTGGT 1948792 29 100.0 32 ............................. TGATGATTGGCTTGATATTTTGGCACGTTGGC 1948853 29 100.0 32 ............................. TTAATGCAAGGCCACAACGTTTTTGGATCATG 1948914 29 100.0 32 ............................. CCTTATTAGTTATTTAATTAATATATTTAATA 1948975 29 100.0 32 ............................. CTTAGAGCGCGGAATGTATTAGAAAGTAAAAA 1949036 29 100.0 32 ............................. TGCAATCTATCGAATCTATGAACACTGAAGCA 1949097 29 100.0 32 ............................. CTCTTTCTGCCTTGGCAAGTTCTGCTAATTCT 1949158 29 100.0 32 ............................. CTTATGTGATGCTTTCCAGTAATCGCCTAATA 1949219 29 100.0 32 ............................. CATGAAATATATGAGAGAAAATCCGCCAAATC 1949280 29 100.0 32 ............................. TTGCGAACAGTTGAAGATTATCAGCTATCAAA 1949341 29 100.0 32 ............................. GGTAATAATAGTTTTTTTAGTTCAAACTGTTG 1949402 29 100.0 32 ............................. GTGATCATTTCAAATGGCACTACATCACCACT 1949463 29 100.0 32 ............................. TGCAGACATAAAATCATGTGGTTGTGGTAATG 1949524 29 100.0 32 ............................. CGCGATATTTATTAATCTTTTGTATTGAAAAG 1949585 29 100.0 32 ............................. CATGAACACGCACTATTGATGATTATAGCACC 1949646 29 100.0 32 ............................. CTGGCTATACACTGTAAACGTTATGCAAAAAT 1949707 29 100.0 32 ............................. CAATATAACTATTAAAAACCAATCCCAATCAT 1949768 29 100.0 33 ............................. CGTAAAATGTTCCGGTTTAATTGCTACATTAGA 1949830 29 100.0 32 ............................. TGCCATTTTAGGCGCTCTAACGCTGCCGCTTT 1949891 29 100.0 32 ............................. CAAGCGTGCCTGATTTGAATATTGATCAGACA 1949952 29 100.0 32 ............................. CGTTCATTCCGCGATACACGCGCCTTACGATA 1950013 29 100.0 32 ............................. CTCTTGTGACCAAGGCACTATCGCCATGCACA 1950074 29 100.0 33 ............................. CCTCACCCAGATGAACATAACCAAACTGATTGT 1950136 29 100.0 32 ............................. TGATACTTGGTGCGGTAATCCGTAAAACTCAA 1950197 29 100.0 32 ............................. TAGCAGAAATAGCAGCGTAGGCAATGGATTTT 1950258 29 100.0 32 ............................. CTTTCAAGTCAGATCAGCCGCTTAGTTTCCCG 1950319 29 100.0 32 ............................. TCAGATTGTATTTTGTGAGCGTGTGCAACTGT 1950380 29 100.0 32 ............................. CAAAACAATTAGCAGTGATATGTTTATATAAT 1950441 29 100.0 32 ............................. TAAATTACAAGCCGCCAGGATGGCCTGAGACT 1950502 29 100.0 32 ............................. GAGCAAAAACAGAACCCGCATTTTAACGAGGT 1950563 29 100.0 32 ............................. GTATTGAGTTAGCAACCTGGCGAATGATGAGA 1950624 29 100.0 32 ............................. CCAATAACTTGATCATGGTTTTGAGCGTGTAT 1950685 29 100.0 32 ............................. CAAGTACAACCTGATTAAGTTTAGCGACTCTG 1950746 29 100.0 32 ............................. CGGTAAAGACAACAGTAATAAATCGCTGTTAA 1950807 29 100.0 32 ............................. TATTAAGCCATAAATTAGCAGTGGCAAATAAA 1950868 29 100.0 32 ............................. GTTCTCGAAAAGCTAGCAATTTGACTTAAATC 1950929 29 100.0 32 ............................. CAATGACAAATTAAACGTAAAAGTAGTGCACC 1950990 29 100.0 32 ............................. CAGATTGATGTTAATGCAATAACTGAAGATAA 1951051 29 100.0 32 ............................. CAGCCGACCATGGGCGATAGGAAAATATCTGG 1951112 29 100.0 32 ............................. ATAGGATTATGTATCAAAGATCATCAGCAGCA 1951173 29 96.6 32 ..............T.............. CTTCAGTCACACTGCACTGTTCCGTGTTGTGA 1951234 29 89.7 0 ...........A.T..............A | ========== ====== ====== ====== ============================= ================================= ================== 46 29 99.6 32 GTGTTCCCCGTGCCCACGGGGATGAACCG # Left flank : GAAGAAGTGTTAGGCGCTGGAGAGATAAAACCACCAGAGCCTTACGAAAATGCACAGCCACCCGCTATTCCTATGCCTGAGACGATAGGTGATGACGGTCATCGTACTTCTTAACAAGGAATTAATATGTCAATGGTCACAGTGGTAACAGAAGCTATTCCACCTCGTTTGCGGGGGAGATTAGCGGTTTGGCTATTAGAAGTTCGAGCGGGTGTCTATGTAGGTGAGGTTTCTGGGCGAGTACGAGAGATGATCTGGTATCAGATTAATGAACTTGCTGAGAATGGAAATGTTGTTATGGCATGGTCAACCAATACCGAATCAGGGTTTGATTTTGTCACTTACGGTGAAAATCGCCGTATGCCAGTTGAGTTGGATGGATTGAGATTGGTCAAATTTAAACCTGAAATTAAAGAAAACTGAACAAAATTTGCTCTTTAAAAATCGGTAATTATTGAAGTACTCTATTTATCCTTACAAAACAATGATATATACTTAGA # Right flank : ATTATAATATAATGCTTCAATTTTTATTCCAATAACGCTTAACTGTTGCTATCGACAAGCCTGTTGCTTTAGACGCTTTACTTTGGCTAATTCCTGTTGCTTTCGCATCTTGCACCGTTTCTATGGTGTTAATCGCGACGGGGCGGCCTAATTTTTTACCTTCTGCTTTTGCACGCGCAAGGCCTTCATTGGTGCGTTCGATGATTCGATTACGTTCAAACTCGGCAAATGCTGAGAACATTTGCAGCATTAACTTTCCTTCTGGGCTTGATAGATCTGCAACGGGTAAGTCTAAGCAAATAACCTTTATTCCTTTACCGGTTAAGTTTTGAATTGTTTGTTGTACATTAATGTTGTCACGGCCAAGACGGTCAAGTTTGAGAACAATTAACGTATCGCCTGATTCAAGTTTGTTATCAACCAGGTTTTTAAACTCAGCACGTTTTTCTGTCGGGGTTGAGCCTGAACAAGTTTCGGTGATCACACGTTGTGCTTCGACA # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGTGCCCACGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGTGCCCACGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-10.30,-9.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //