Array 1 367980-364583 **** Predicted by CRISPRDetect 2.4 *** >NZ_FTOM01000001.1 Bieblia vinaykumarii strain DSM 18714, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ======================================= ================== 367979 31 100.0 35 ............................... GCAGCATCAATGGTCCGTGGCGCTGATCGCGCTGC 367913 31 100.0 34 ............................... ACCTTCGGCGTAGACATGTTGACCGCACAAACTT 367848 31 100.0 34 ............................... CATCGCGGTGATCGCGGCCTGCGCGCGACGAAGG 367783 31 100.0 35 ............................... ATCCTCGTCGAGGAAATTCACATGGAAGGGCGCCG 367717 31 100.0 35 ............................... CACGTCTCCGCATGTGTGAGTTAGCCCGGCAGGTC 367651 31 100.0 34 ............................... CGTGGTGCAACCGTAGGTAGTAAATGCGATTTAT 367586 31 100.0 34 ............................... ACTTCCAGGACGCCGGGCGGTTGCTGGTGGAAGC 367521 31 100.0 36 ............................... GTTTTCACCGCGACGTAATCCACGATCCTCTCGCCC 367454 31 100.0 35 ............................... TTTACGAGATGGAGCCGGTCACATGAGCGCCTCAG 367388 31 100.0 35 ............................... ACCATCATCGACGAGCTGCACGAGCTGGGGAAGAA 367322 31 100.0 35 ............................... ATGCTGATGCTGCGCGACCCGGAGGCCCGGCACTC 367256 31 100.0 34 ............................... CGGTGGGGGGCGGCGCATGATCCCCGCCCGCCGT 367191 31 100.0 37 ............................... AGCCCGCAGAGCGTCTCGAACACCTCGGTCTCGGCAC 367123 31 100.0 35 ............................... AAGTATGACCGGAAGGTCTATTCCGGCCTGCCGTC 367057 31 100.0 36 ............................... GCGCGCCTTGGCCTGTCTGGCGACGACCTCAAGAAG 366990 31 100.0 34 ............................... ACCCAGATCCTGGGGGTCGAGACGCTCAACGTGC 366925 31 100.0 36 ............................... GCAAACCGTGAGGCGGTCAACATCGGCAACACCACC 366858 31 100.0 34 ............................... TGGGCCGATGGTCGCGGCACGGCCTACGAGGGTT 366793 31 100.0 35 ............................... AGCGCGAACACCTGGGCGACCGGCCCTATGCCGCC 366727 31 100.0 35 ............................... TCGAGGATATGGGCAATAACGATGCGGCTGTGCAG 366661 31 100.0 36 ............................... CGGGCGGCGATGGGACGCCAATACGTCACCGCGCCA 366594 31 100.0 35 ............................... CAAAAGCTCGAGTGGCAGAAGACCAGGGACCGCAA 366528 31 100.0 35 ............................... CGCGTGTCCGATGGGCAGACTTTCCCGAACCGGAC 366462 31 100.0 34 ............................... CAGGCCGCGACGATACCGTCAACCGTGAATACGG 366397 31 100.0 34 ............................... TGGATATCGCTGGTGCTGCAGCGGCTGCATTGCG 366332 31 100.0 35 ............................... CGAGTTGATGCTGGAAATCATCAAGCGGCTCGGTG 366266 31 100.0 36 ............................... AGCGCGAACACCTGGGCGACCGGCCCTATGCCGCCG 366199 31 100.0 35 ............................... GTTAGGCGGGGCGCGACGGCGAAGCCGAATTACAG 366133 31 100.0 39 ............................... GTCGCCTGGAAGCCGTGAGAATAACAATCCTGTAGGCGG 366063 31 100.0 34 ............................... GTCGCAGCCCCATCCGTATCTTGCTGACGTCTGG 365998 31 100.0 34 ............................... GCGTCACCTATGGGAAGGAATGCTAATCGTGACT 365933 31 100.0 36 ............................... ACCTGGTTATGTCTCGTGGTCAGAGCAAACCGCGGG 365866 31 100.0 34 ............................... GAATCCGATCTGGAAATTCACGGGGCGAAATATT 365801 31 100.0 35 ............................... GGCGGGTCCGCGGGGGAGCGGTTCGTCGAGCTGCT 365735 31 100.0 35 ............................... CTCCTCCTCGAACTCCACCTCGTCGGCCAGCTCGC 365669 31 100.0 35 ............................... AAGCCCACGTCTGCCTCGCGTCTTGAGCGCGAGAT 365603 31 100.0 33 ............................... CTTGACCAGATCGGCGGCTGTGCTGTCGAAACC 365539 31 100.0 35 ............................... GCCGGTCAGAGACTGCGCCGCGTGCGATCTGATCC 365473 31 100.0 36 ............................... AGCGCAAAGCGGCCGACGCGCTCGGTCAGCCGCGTG 365406 31 100.0 34 ............................... AACGTCTGGAGCATGGCGGCCAAGAAATGAGCCT 365341 31 100.0 35 ............................... TCGCGCAGCTCGCTGCCGTTGCGCGTCAAGCAGAT 365275 31 100.0 35 ............................... TTGTCGCGTTGGCTGCGCTCGGATGGGCACGCCCT 365209 31 100.0 36 ............................... GCCTCGATGTGGTCGAGCCTTCAGGACCAGGCCCGC 365142 31 100.0 33 ............................... GATCTGCCCGAGGCGCTGGAGATCTCGCGCACC 365078 31 100.0 36 ............................... ATACGATCCCGTCAACTGCAGGGTGATTCCACCGAC 365011 31 100.0 35 ............................... GATCCCGAGTGCCACCACCTACACGGGGGTAGATC 364945 31 100.0 35 ............................... GACGTGATCCACGCCAACATTGACAAGGAGGGCCG 364879 31 100.0 36 ............................... ATAGGTCTCGACGGGGGGACGATCAGGCTGGCGCAT 364812 31 100.0 35 ............................... TTTAATCGGCCGTCCGTCTTCGCCCACCGGGCCCC 364746 31 100.0 34 ............................... CTCGATCCGCTCGCGGTATGGTCTGGCCGGGATG 364681 31 100.0 36 ............................... CACGTCAAGCACTACGGGCGCCACGGCGGGAGGGGG 364614 31 83.9 0 .........................G.CCTT | G [364586] ========== ====== ====== ====== =============================== ======================================= ================== 52 31 99.7 35 GTCGCCCCCACCCAGGGGCGCGGATCGAAAC # Left flank : ACGCCTATCCCCCCTGGTTCTGGAGCTGAGGCATGCTGGTTCTGGTCACCTATGACGTCAACACGCTGGAAGAGGGCGGCAAGAAGCGCTTGCGCCGCGTCGCCCGCGCCTGCGAAGATTACGGTCAGCGCGTCCAGTTCTCGGTCTTCGAGATCGAGGTCGAGCCCGCGCAATGGGTCAAGCTGAAGGCGCGCCTCGAGGACATCATCCACCCCGAGCATGACAGCCTGCGGTTCTATTATCTCGGGGCGAACTGGAAACGGCGGGTCGAGCATGTCGGCGCCAAGCCCGCCCTCGATCTCGGAGGGCCGCTGATCCTCTAGGCTGCGAACCACAAGCGTGCCGGCGGTCCCGCCGGTGTTCGCATCGTGCGAACTCCTTGAAATCGTTGATCAGGAAATGACAACCGGGCGCAACCGGCGCGCCCGCGGCATTCTGCCGTCCCCATGCGCGGAAATGCGCTATTTTTCATAATGAAGAGAGGAGGTTAGCCTGAGCCA # Right flank : TGGGGGCTCCGCGCTCCTGTTTCTTCTGGATCTGGCGCGTGTGGGGATCCTGGGAAGGGGGGGCAGGGGGCGGCTGGATCAGGGGCGGTCGGGCTCGACCGGGGCGCGGGCGTGGAAATGGTGGGTCGGGCCGTGGCCCTGCCCGACCTCGAGCGCGCCGGCCGCGGCGATCGCGCCGGCGATGTAGAGCTTGGCGCGCCGTGCCGCCTCGGGAAGGGGCAGACCGTGCCCGAGGAACGTGGCCAGCGCCGAGGACAGCGTGCAGCCCGTGCCATGTGTCCGGGTCGTCTGGATGCGCGGGCCGGACAGCCAGTGCAGCCCTTGCCGATCGGCCAGCAGATCGGCGCAATCGGAGGCCGGCAGATGCCCGCCCTTGAGCATCACCGCCCCCGGCCCCAGGTCCAGAAGCGCGCGGGCCTGCGCCTCCATCGCGGCGGTGTCGGTGGCTTCGGGCCGGCCCAGCAGATCGGCGGCCTCGGGCAGGTTCGGGGTGATGACGG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCCCCACCCAGGGGCGCGGATCGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-8.60,-6.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [33.3-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,1.05 Confidence: MEDIUM] # Array family : NA // Array 1 5651-9119 **** Predicted by CRISPRDetect 2.4 *** >NZ_FTOM01000016.1 Bieblia vinaykumarii strain DSM 18714, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 5651 36 100.0 30 .................................... CATGCTCGACATGCAAGAGCGCATGATCGA 5717 36 100.0 30 .................................... ATCACTGACGGTGCGCCAGTCGGTGAGGGG 5783 36 100.0 30 .................................... CCGGGATTGCGCAGCCGGAATGGCGATTTG 5849 36 100.0 30 .................................... GCCATCCACATGCGTGATGAGGAACCCGCC 5915 36 100.0 30 .................................... AAGAGCCTGCCACGCGTCGGCGATCATGCG 5981 36 100.0 30 .................................... CAAGCGTCCGATAATCCATCAGTCGTCCTC 6047 36 100.0 30 .................................... CGATAATTTCCTTTCTGCTTATTGCGATGC 6113 36 100.0 30 .................................... CTTGTCCTTTTTCGCAAACGGTTCCTTCTC 6179 36 100.0 30 .................................... ATGCGGATCGGTAAACCATCCCGTGTGATC 6245 36 100.0 30 .................................... GGGCCGTCCATGCTCTACCACCCACCAGCC 6311 36 100.0 30 .................................... TGAAACCATGCGTGAGGGGCACTGCGAAAA 6377 36 100.0 30 .................................... TTGCGCAACCGCGTTGGCGACAGTCTCGTT 6443 36 100.0 30 .................................... GGGTTGCTGCCGCGCCATAGGGTTACGTCC 6509 36 100.0 30 .................................... GAACGCTTGCAGCTTCCACACTTCGCCCGC 6575 36 100.0 30 .................................... CACGGGGGTCTCCTTTCAGTTTGGCCTTAT 6641 36 100.0 30 .................................... AAGAATGGCAAGATCGTCTCCATCCTCACC 6707 36 100.0 30 .................................... ACCAGCGGGGCGCTGCCATCGTGCGCATGT 6773 36 100.0 30 .................................... AGCCCAGCGGCCAACAGCTCGTCTCGTTGG 6839 36 100.0 30 .................................... CGGCTTGGCCATGTCAAAAACCCCCCTTTT 6905 36 100.0 30 .................................... GGGTGCGGCATAACTTCCGCGTAGGCCGCT 6971 36 100.0 30 .................................... GCTCGCAGTCAAGCTGCGGGCTGCGGATGC 7037 36 100.0 30 .................................... CAGCGTGTTGTTGATCTGGTCGTCGTCGAG 7103 36 100.0 30 .................................... ATGGTCTGGAAATGGTAGTCCACATCCTCG 7169 36 100.0 30 .................................... GGCCCGGCGATGCGCGAATGCCTCGAATGG 7235 36 100.0 30 .................................... AGGCGATCATCGGCGACATTCCCGGCCCGC 7301 36 100.0 30 .................................... TGGAACGACCGCCGGGTGTACATCAACTTC 7367 36 100.0 30 .................................... GAATGAAAACAGGATCCACCTCCAGACTTT 7433 36 100.0 30 .................................... CATATCGCGGTCGGTGTCGTTGACCGTGAG 7499 36 100.0 30 .................................... CATATCGCGGTCGGTGTCGTTGACCGTGAG 7565 36 100.0 30 .................................... GAAGATGGACGGCGCGCGTGCCTTCGCCGT 7631 36 100.0 30 .................................... CATATCGCGGTCGGTGTCGTTGACCGTGAG 7697 36 100.0 30 .................................... CATATCGCGGTCGGTGTCGTTGACCGTGAG 7763 36 100.0 30 .................................... CATATCGCGGTCGGTGTCGTTGACCGTGAG 7829 36 100.0 30 .................................... GAAGATGGACGGCGCGCGTGCCTTCGCCGT 7895 36 100.0 30 .................................... GTGGACAGCAACCACGACAACGCACTCGAG 7961 36 100.0 30 .................................... ATGGACCCCGAGAGGCTGCACCGGGCAGCC 8027 36 100.0 30 .................................... CTGGGCGTTGACTTCGTCGGTCCACACATA 8093 36 100.0 30 .................................... CGAGAAGCTCTGCGTCCAGTCGCGGGTGTA 8159 36 100.0 30 .................................... CATCTTCCGAACGTCAACTACTGGACCTAT 8225 36 100.0 30 .................................... CAGGTGATAGGTCGAGCCCGAGCTGTCCGT 8291 36 100.0 30 .................................... GATCTGGGCCGGGAAGCACCGTTGCAACCC 8357 36 100.0 31 .................................... TCTCGTCTGGCCACGGACCATCTGCAATTGC 8424 36 100.0 30 .................................... CGGCGATCAAGCAGCCCGCAAGCAGTCATC 8490 36 100.0 30 .................................... TAGCGACGCGATATCCCTCTCAGAACAGCG 8556 36 100.0 30 .................................... GATTGACGCGGTTGCGTCATGGAAAGCCGC 8622 36 100.0 30 .................................... CGGCGATCAAGCAGCCCGCAAGCAGTCATC 8688 36 100.0 30 .................................... TTGTCATGGGTTAATGGCGCGTGGTCTGAT 8754 36 100.0 30 .................................... TCCTCTCCGCGCTCAATCAGCGCGTTGGCG 8820 36 100.0 30 .................................... CGCGCGCACCGCGTCCCATTCGCGCGCGCC 8886 36 100.0 30 .................................... GTCACGATGCGCGTCAAGGCTGCGCAGAAG 8952 36 100.0 30 .................................... GGGATCAGCGCATTGACCAAAAGCTGGCCG 9018 36 100.0 30 .................................... TGTCATCGGCCCCTCGTGGCCGCATCTGCC 9084 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 53 36 100.0 30 AGCTTAGCCATTCAGAAACCGCAGGCCAACCGCAAC # Left flank : CCGGATCTGCTTCTTTTCGATCCTCCGACGGCGATCGAATGGGGGGCGCTGGGGCACCTTGATGACGAAACGCCATGACAAAAGCGATGAAAGACGGGGCCTATCTGAACGGGTATCGGCTGATGTGGATTTTCGTGATGTTCGACCTGCCGGTGGGCAGCAAGGCAGAAATGCGAGACGCGACGCGGTTTCGCGAATTCCTGCTCGATGAAGGCTTCGAGATGAGCCAGTTCTCGATCTACGCCCGCTTCTGCAACGGCAAGGACAGCTATGAGTCGTATCTGCGACGGATCGAGGGTAATCTGCCCGAGAAAGGGGAGGTTCATGTCCTCACGTTCACCGACAAGCAGTATGAGGGAATCGTACGATTCTCCAGCCAGCGCAGGCGCAAGCGCCGGGAAAACCCGGACCAACTTGCGTTGTTCTAGCTTTGTCCGCAGGCTTTGGCCAACCGGATGCGCTGCTTCTTCTTTGTATTTCAGAAGCTTGGCAGCGCATCC # Right flank : CGCGGCGGCTCTTGGCCTTTGCCTTCGCCGGAGCCTAGGCTCTGCGCGCTAGATTGCGCATTTTGCGGGCAATACGGCCATGCAGAATGCGGGCATCTGACTTCCATTTGTGCAAAGGGCGGAAATGGACGTGTCATGTCGTTTTGGGCGCGCCCGCGGCTCCTGCCTTCGGATCATCCGGGCGGACAGGAGGCGGGGATCTGCCCCCCTCGTGCCCCCCCCGCGCGGTTTGGGGGCGCGCCAAGATGTCGGTGCGGGGCTGCTCGCATCGCAGAGGAGGGCCAGGAATGCGCATGCCGACGCGTGTCGCCGATACGGTTCGCATCCGCACCCGCGGCGCCGTCAGGGGGCGTTATCGCGGCAGGGATACTGGCCGTCCTCTTCTTCTCTGGCCGCAGAGGCGTGTCACCGGCTGACCTGCCTCCATCCGTTTTCGCAGCGCAAGGAACGCAAACACGATGAAGAAACTTCTTCTCACCACGGTGATCGCCTCCAGCTTC # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AGCTTAGCCATTCAGAAACCGCAGGCCAACCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [12,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.30,-4.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [46.7-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0.37 Confidence: LOW] # Array family : NA //