Array 1 233807-234763 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_QYCH01000002.1 Streptococcus mutans strain UAB-6 NODE_2_length_353289_cov_17.8528, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence             	Spacer_Sequence                              	Insertion/Deletion
==========	======	======	======	============================	=============================================	==================
    233807	    28	 100.0	    33	............................	CAACAACGCAACTTGCTGCCAAGTGACAAAAAG            	
    233868	    28	 100.0	    33	............................	TATTGCGCCAAGAAGTCCAATCACTTGGTCTAG            	
    233929	    28	 100.0	    33	............................	TATAGCTCTGCGCCTGCGCAAATTGTGGTCTCG            	
    233990	    28	 100.0	    33	............................	CAGCATGATTGATGTACTCAATCAAGGTGTTAA            	
    234051	    28	 100.0	    34	............................	TGTTGTTGGATCAACTGGCATTTCTTCTTCACTC           	
    234113	    28	 100.0	    33	............................	GTTATCATTATTATCATCATCAGTTTTTTTGCG            	
    234174	    28	 100.0	    33	............................	AATTGCACAAAAACTTTTTTGTTTTTAAAATTG            	
    234235	    28	 100.0	    34	............................	GGACGGAACGTCATGAAAGCCGTCGGATTGACAA           	
    234297	    28	 100.0	    33	............................	CAAGTCCGCTACCGCCTAACCAAAAAGCAATAC            	
    234358	    28	 100.0	    33	............................	TTCCACGACCTGTAGAGTTCTTCATACTCTTCC            	
    234419	    28	 100.0	    33	............................	CGCTTTGTTTTTTGTGTACAATACAGTTAGAGC            	
    234480	    28	  96.4	    45	T...........................	TGGGAGCTGTTAAGTTGCTGTTTTCGGACCAAAACGGAAAGTTAC	
    234553	    28	 100.0	    33	............................	CACTGTATTTCCAACCCGAACGCCAACACCCGT            	
    234614	    28	 100.0	    33	............................	TAGTAATCTTTCCCCAATAAATCCTTTGTCATT            	
    234675	    28	 100.0	    33	............................	TAAAATTATCTCATTGTTTCTTTGATGATGTGA            	
    234736	    28	 100.0	     0	............................	|                                            	
==========	======	======	======	============================	=============================================	==================
        16	    28	  99.8	    34	ATTTTACCCGCACGAGCGGGGGTGATCC	                                             	       

# Left flank :   GAAAATGAAAATAGCATCATAGAAATTGGCGCTGTCAAGATTGGTCCCTCTCAATTGGAAGAGTTTAATTATCTTGTGAAATATGATAAAATTCTACCAAAACAGATATCGAAATTAACAGGAATTAGTCAGGAACTTTTGGATCGTGATGGTAAAGACCTTCAAGTTGTACTTCAGGAATTTTTGAATTTTATCGGAAATCACGATCTTGTCGGATATGGGATAAATTTTGATATAAAATTTATAAATAAAAAGTTGAAAGAATTAAATCAGCCCTTATTGAAAAATCGAGTATATGACTTAATGCAATACGCTAAAAAAGAAAAATTATTTTTAGATAATTATAAATTGCAGACGGTATTAAAAGCATACGAAATAGAGGATGAGGTGCCTCATAGAGCTCTTCACGATTCTAAACTGATTTATGACTTGTCAACTAAAATGAATAAATTTTTGAAAGGGATCAATCAGAAGTAGCGGTTTTATTGGGATCTTTTAGT
# Right flank :  CCAGTGACAACAACGAATCAGATACAGAAATCATGTTTTACCTACACATATAGACTTGTGATGTTAGACCGATTGAAATTGATTCTTTTGGATAGAAGGAAATCAAATATATATATTAAGTGGATGACAATAAAAGTAAAATATTAGATAATAGAGATTAAGAATTATAAAGAATTGGAAAATGTTTAGTCGTCAAACCTAAAATCATTATAATGATACGAATATTTTTTTGATCAATTTTGTGATAATATAAAGAAGCGACATGCTTACCAATTATTTCAATCTGATAGAGGTAATAATGAAACTTTTATATACCGACATTCCATACAACATAACAGAGATTTTGGCCGAGGAAGCACAAATAGCTGCTAAGGCTGGTAAGCGGGTCTTTTATATTGCTCCCAACTCCTTGTCTTTTGAGAAGGAGCGAGCTGTTTTGGAGACCCTGCCTGAGCGGGCTTCCTTTGCTATTACCATTACGCGTTTTGAGCAGATGGCAC

# Questionable array : NO	 Score: 6.25
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     ATTTTACCCGCACGAGCGGGGGTGATCC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [5,6] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched ATTTTACCCGCACGAGCGGGGGTGATCC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  NA [-9.90,-9.90] Score: 0/0.37
# 	Array degeneracy analysis prediction:      F [0-1] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [70.0-65.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [4.91,0.37   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
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