Array 1 580774-583005 **** Predicted by CRISPRDetect 2.4 *** >NC_018528.1 Lactobacillus helveticus R0052, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 580774 32 100.0 34 ................................ AATGACTGATGAACAAAAGACAGCATTGAAGAAT 580840 32 100.0 36 ................................ TGTTCAGCTCTATCTTGATGTCAAAGATCCTAACGG 580908 32 100.0 36 ................................ ATTCTGTAAGGACTGAAACACAAACTCTAAAATATA 580976 32 100.0 34 ................................ ATCGTTATGCAGGTATTACTACTGCTACTAATAC 581042 32 100.0 35 ................................ TCAGGAGATACTGCCGTTGGCTTTGAAGATAAATA 581109 32 100.0 35 ................................ AATTCATTACTGGCATTACTCCAGTCACTGCGCCA 581176 32 100.0 35 ................................ GAAAGGAAATATATATGTCAGTCAAAGTTAATGGT 581243 32 100.0 35 ................................ GATTTTGTTAGAAAATTAACCGATGATTTTTTACA 581310 32 100.0 34 ................................ TACCCACCTAGCTTAGCACCTACATGGAATGACA 581376 32 100.0 36 ................................ CATTGTAGTAAAAGTTGCAGGGTCTTGAGTAAGAAC 581444 32 100.0 34 ................................ AATTAAGTCTAATCATAGGGGCAATAATTGCTTA 581510 32 100.0 35 ................................ TTTTTCGTCTTCTGCTCCTAGTGACTTAGTGAGCC 581577 32 100.0 34 ................................ AAGTGAATCGACAGGTATTGCAGATGATGATTTA 581643 32 100.0 35 ................................ AAGATGTGGAAGAGTGCAAGCACACACAGTCCCAA 581710 32 100.0 34 ................................ TTAGAATACTTATGATCCTTAGATAGATGAACCG 581776 32 100.0 35 ................................ CTCTGATCTGCTCAGCACGTTGCTCTTGCTTTGAA 581843 32 100.0 35 ................................ GATTATTCGGAACAACAGATGATCCTAAATGCTCA 581910 32 100.0 35 ................................ CTAAAGCATACTTAGTAGCATATGAACTGGCTGAC 581977 32 100.0 34 ................................ TACAAACACTTGCCAACTTATAATCCACAAATGC 582043 32 100.0 34 ................................ AAAGGTGTGTGGATACCTGCTGAATATTGGTTAG 582109 32 100.0 35 ................................ AGCATCAACGGCTCTAATTATGTCATTGCCGGTTT 582176 32 100.0 34 ................................ ACCTGATCAAACGTTAGGCAATAGATTAACCGAA 582242 32 100.0 34 ................................ TTTACGAATGTCTTGCCAATTAGTATATTTACTT 582308 32 100.0 34 ................................ AGAATCAAGACCACCTGTTAGCGTTTTACCACCG 582374 32 100.0 35 ................................ AAAGAACATAGTTTGCAGAACTGTTTCCAAGTAAA 582441 32 100.0 36 ................................ GGCTTTAGATGCGTCAAATGCCGCCTGTGGGCTATC 582509 32 100.0 34 ................................ AGAAGATGGATACAATTTTTAGAAATTCCAGTCT 582575 32 100.0 35 ................................ ACACCATATGTGGTCAACGCTTTAATTGGATTACG 582642 32 100.0 34 ................................ ACTAACTGGAACATCCAAGTACTGTGCGGAAACC 582708 32 100.0 35 ................................ ATCGGCTAATTGCTTTTCAAGTGAATCAGCCTTTG 582775 32 100.0 34 ................................ ACTGAGACGCTAGACGCTATTAGATCACAGTCAC 582841 32 100.0 35 ................................ ATCAAGCTTGCCAACGGGTCGATTTTATTCTGTGA 582908 32 100.0 34 ................................ TTTTGAATAGATGGCATGTAAGTCTGATATAGTT 582974 32 96.9 0 ...........C.................... | ========== ====== ====== ====== ================================ ==================================== ================== 34 32 99.9 35 GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT # Left flank : GGAGATCTTGACGAATACCCACCGTTTATGTGGAAGTAGGTATGCAGCATGATGGTAGTAGTTAGTTACGATATTAATACGGAAAGTAAATCTGGTCAGCGAAGGTTACGTCATGTAGCCAAAATATGCTTAGATTATGGACAACGAGTTCAAAATTCCGTTTTTGAATGTAAAGTTAATTCGATGCAATTAGAGTTGATGAAAGAAAGACTACTAGACGAAATCGATGATAGCCAAGATAGTTTGTATTTTTTTAATTTAGGGAAGAATTATAAAAATAGAATTAAGTCATATGGAATTAAAGAGGTTATAAATTTAGAATCGCCTGTAATATTTTGATATCGGTGCGAACTGTATGTGAACATGCTTTTAGTGAAGATTCGCACCAATTTTAAACAGGTGAAAAGTGATCTTTTGATAAAAAATATATTTTTATCAGGGTAAGTTAATTTGAAGCCCAATATTTAGAAATGAATTGAAATCATGATCTAAATATTGCG # Right flank : TTTTAGGTCCATTGCACTCTTGCCAGTGAAGTCGTGTCGCACTCCTTGTGATGCACTTGTGGGTGTATTAGTCGGCTTCTTCAACCCAGGCTTGAAGTACTAATTATTAAGAGGAGATTATTCAGATGACAATCGAAGAGATGCAAAAAGGCTATCAAAATGAAGTTGCTTATCAAAAACATATGCTTCGCAATCTAGGCTATTGATTCCAACTCTTTTTAACAGTTAGTGCGATTGGTTTGGTTTTAATTTACTATTTCCATCAATCAACTATGTGGCTCTTTATAATCGGAATTATTCTGATGGTCGCCGGTGTTTTAGGAATGTTTGCTTTTGGCTATGCTTCTTGGCGCGGACGGCAGAATGTCACTCTGGTAATCGAAGACTATGAGAAAAAGATTGCAGAAATTAAAAAGTTAGATCAAAATGCTTCCGGAACGGAAAAGATCCGTTTCAAATGATTCTTATATGAATAAAACAATTTCCCCTTCTCTAGAAAT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,10] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACTCTTAGTGAGTGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.50,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //