Array 1 232701-233218 **** Predicted by CRISPRDetect 2.4 *** >NZ_QLYX01000011.1 Actinomadura craniellae strain LHW63021 contig11, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 232701 29 100.0 32 ............................. TCGGCTACGACGCTCGCGATTCGCCTGGATTT 232762 29 100.0 32 ............................. TACGAGCACCCAGGGTGGGCGCCACGAGGAGT 232823 29 100.0 32 ............................. GGCTGGGGCTCTTTGCATTCCACCTCGCGGCC 232884 29 100.0 32 ............................. ACACAGGGCGCCTCCGCATGGCGGGGGCGCTC 232945 29 100.0 32 ............................. CGAACCATTGCTTCACCTGCGTCCAGGTCAGT 233006 29 100.0 33 ............................. GTCCAGGCCCGACATGGTGAGCGCGGTGGCGGC 233068 29 96.6 32 .............A............... GGCCCTGCCGTCCTAACCTGAGGGTGACGAGA 233129 29 93.1 32 .......................T...T. AGAGCAACCGGCGGGTACCGCCCCCGCTACTC 233190 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 9 29 98.9 32 GTCGGCCCCACGCGTGTAGGGAGCGATCG # Left flank : TGGCAGCGCCGGGAAAGAACGTGCGGCAGAAGGCAGGCCTGAACCGCGTCATCCTGGACTCCGCTCCAGCCGAGTTGCGTCGCCAGGTGAACTACAAGGCCACCTGGTATGGATCTGAGCTGGCGGTCGCAGACCGCTGGTTCCCCTCGAGTAAGACCTGTTCGGGTTGCGGATGGCAAAACCCACACCTGAAGCTGTCCGACAGGGTGTTTCGTTGCACAGACTGCGGGCTGGTGATGGACCGGGACATGAACGCGGCCCGGAACATCGAACGCCACGCAGTGCTGATCGATCGAAACGTCGCCTGCGATAGGCGGGAGACGCTAAACGCCCGTGGAGCATCCATAAGACCAACCACCTCTCGGGGCGGTAGGCACGACGCATCGAAGCGGGAAGGCTCCGGCGCTCGGCCTGAGTCACCTCAGCAGAGTGATCTGCTGACGCTCCCAACCTTGAATAACGAAACGGCAACGCCTCCATAGCGGTGCAGGTCAATAAGG # Right flank : GGGGATATCAGGTCACCGATTGGAGAGCCGTGAGTTGGCCCGCGTGTGTGGGGAGGGTCATATGACTGGTCGTACCCGATCGACGCCGACGAGTGGCTCTCCTAAGGGACAGAGCGGTCGGAGAAGGTTCTCGGGCCAAGGAGGCTGGTGACTAGTGGATTGCCGGGCACGCAGCGGTGAACGGCGAACTCGACCGGTGCCTTGATGATCGAACGCGCGCTGCACGCCGGGCTTGAATAGGTGCTCGTAGAGCTAGCCGGACGCACCAATCGGGCTTCAGATGTTCCAGAGCTACGTCGGGACCAGCGAGTCAGGGCTCCGCGCCGAGGTTGAGAGCGAGCAGGCACTGAACTGCGGCGAGTACTTGGTTGACATGATTGACGCCCACCGGTACTGGGACTTGACCAGACCCGGTGCGCAGGATGCGGTCGCCCGGTTGGAGGAGAAGTGCTTGGGTTCTCCCACAGGCTGTTTCTCCGTGCATGCGCCGGTGGGAGGAG # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGGCCCCACGCGTGTAGGGAGCGATCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.60,-8.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [46.7-38.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA //