Array 1 2065742-2063991 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP025839.1 Latilactobacillus sakei strain DS4 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 2065741 36 100.0 30 .................................... ATCCACGCGCAATAGCTTCACGCACCGAAA 2065675 36 100.0 30 .................................... ACCAGACTCTTGCAGTCCGATTTCATCCCC 2065609 36 100.0 30 .................................... TGCCCGTATTGAATATATAGTTTTTCATTT 2065543 36 100.0 30 .................................... TACATTGCGCAGCGTAAGCCAAAAAGCGAT 2065477 36 100.0 30 .................................... AGCTTTACTTCAAGCCTAATCGTACGTTAA 2065411 36 100.0 30 .................................... ATTTCGCTGAAACCTAATTCATCAATTTGT 2065345 36 100.0 29 .................................... CTCACGCACCCAGTTAATAACGCATCAAT 2065280 36 100.0 30 .................................... ATACTCTTTCGTAGTGATCATCAAAGCGAC 2065214 36 100.0 30 .................................... CTTATCGAGCTTGTTAAGTTTTGATTCCAA 2065148 36 100.0 30 .................................... GCACCACGTAAAGCAGTACCGGCGACTGAA 2065082 36 100.0 30 .................................... AGAACAATCCGACAGAACAAAAGTCGCGTA 2065016 36 100.0 30 .................................... ATTGGCCAGTCCGTAGCGCTAATTGGATAT 2064950 36 100.0 30 .................................... TCAATCGTTGCTAGGATGACACTTCTGAAA 2064884 36 100.0 30 .................................... TGCAGCATTGATTGAGTACGGGATTTACAG 2064818 36 100.0 30 .................................... GGCATTAGTCGTGATAATTGCCTCTTTATC 2064752 36 100.0 30 .................................... TCAATCCGCGTGCGATTAGCGTTAATGATA 2064686 36 100.0 30 .................................... GCTGCTAACTTCAATGCGGCGCAGGGCGGA 2064620 36 100.0 30 .................................... AATCAAAGATTACGAAGGTGGCTATTTAAA 2064554 36 100.0 30 .................................... ATTATCCATTTAGCATCTCCTTAATGATTT 2064488 36 100.0 30 .................................... CCTGACTCATCGAAGAAAGAGTTTTTCCGT 2064422 36 100.0 30 .................................... AAAAGTACGTGTTATCAGACGACTCGCTCT 2064356 36 100.0 30 .................................... AATTAAGGAGTGATGATGATGAAACATAGA 2064290 36 100.0 30 .................................... GCTAGACACTTGGAACACCATTTCATGGCG 2064224 36 100.0 30 .................................... AAATTATCTTTAGATGATGAGGGCAAGTTG 2064158 36 100.0 30 .................................... TCCATCACGTTGAAATTGAACAGATAGGGC 2064092 36 97.2 30 ........................A........... TTATGACGGTAGCTTACAGCTACGTCAGGA 2064026 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 27 36 99.9 30 ATTTCATCTTAACCGAATGTTGAAGGAAACAATAGC # Left flank : GATGGCGAGTATCATACGCTAAATAATGCTATTCATAAAGTAGTTTCCTCGTATACAATGTGTTGTCGAAATGATTCAGCTGCAGGACTAAAATTGCCGGAATTAGTCCGATTGCGAGCTCACGAGTATGAGTAAATATATGCGTTTATTAGTGATGTTTGATTTACCGGTGGTTAAGGCAGAAGATCGGCGGGCGGCCAGTAAATTCCGGCAGTATTTACTGGGTGAAGGTTATGTAATGATGCAATATTCTGTCTATTATCGGATTGTGAATGGCTATGATATGTCAAAAAAATATGAGTATCGATTAAATGATAATTTGCCCGAAAAGGGGTCAGTACGATTATTGATTGTGACAGAGAAACAGTTTGATGAAATGCGGTTACTTGTAGGGGATCGGCTACCTAATGAGGAAAAAGTCGATGGGAACCAGTTGACTACATTTTGACCATTAAAAAAGGCTCGATATCGTTATGATATCGGGCTTTTTTAGTGAAGGT # Right flank : TCATCCCCTACCCCACGTTCGTTTCTACTATTTCATCTTTTTATGGCGTAGGGATAATTTAGAATATATGTGTGGTATAATTGATAGTGAAGTTAAACTATTTTAACTTACTGATAACTCTACGTTTTAAATTGAGATTAGAGCATAAAAAAACCCGCCGAAGCGGGCAAGTAAAATAGATATTGCCGTATCTATTTTACTTTATAAGCATTGTGGCTAGATTCGAGTCTGATCCACAAATACCTACAAGTCCTATTGTACGTTTTTTTTTGAATTTAACAACTTTTTAGACTAGCCATGAGTGCGCCCAAAAACAATGAATAACTATTTATCTAAAATGGTTTATTGATTTGGCGGTAATTATGGTTATTTTTGTGTCTAATTTTCGAGAACGTAATTATTTTTAGGAGTGATAGGAATGGATGAAGTTGTTGGAGAAATCTACATAACAAAAAACTATGGTCAATTTAAATATTTTGAAGGTAATCGTAAACCTGAGA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTCATCTTAACCGAATGTTGAAGGAAACAATAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.80,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA //