Array 1 1509-131 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIWNC010000043.1 Wangella sp. NEAU-J3 Scaffold37_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ===================================== ================== 1508 29 100.0 32 ............................. CGTGCTGCCTGCTGTCCGGCCGGATCTCCGCT 1447 29 100.0 32 ............................. CCGGGGCTGTTCCGGCAGTTCCTGGACGTCAT 1386 29 100.0 32 ............................. GTGATCGGGGTGCCGCCGCGTGACACGGACAC 1325 29 100.0 32 ............................. CTCGTCACCCGCGCACACCGCGCCCTCGACCC 1264 29 100.0 32 ............................. TGCAAGACCGAGTGGGAAGAGGACGCCCCGAC 1203 29 100.0 32 ............................. TGCTGGTCGAGTGCCGCTGCACGACCAGGTCG 1142 29 96.6 32 ............................G GTGCGCAGTTCGCCGCGGCCGCCGGCGAGCAC 1081 29 96.6 32 ...............A............. CGGTCGACCATCGCCTCGCGCCGGGTGACCGT 1020 29 100.0 32 ............................. ATGTCCTGGTCGTCCACCGGCGCGCTGTCGCT 959 29 100.0 32 ............................. AACTTCGACGGCGGCCCGGCCGGAACTACCCT 898 29 100.0 32 ............................. GAAGCGGCGGACGCGGCGAGCCCGTCCACGTG 837 29 96.6 32 ..............G.............. GGCCCACAGCCGGACGGCCTGCCAGCCGCGGG 776 29 93.1 32 .............G......A........ TCGAGGACCGCGCTGTGCCCAGCTGAGGCGGT 715 29 96.6 34 ............................G ATCGAGCCGAGGACGTCACCTTTGGCCTGCGCAG 652 29 100.0 32 ............................. TGCACCTACTTCTGCTGCCTCGGTGACAACGT 591 29 100.0 32 ............................. TGCACCTACTTCTGCTGCCTCGGTGACAACGT 530 29 100.0 32 ............................. GCGACCCCGCCGGTACTGGCCGCGCTCACGAC 469 29 96.6 32 ...........T................. GCATCGCCGCGCACCCGTGGCTGCCCGACAAC 408 29 96.6 32 .........................C... CGCCGGCAGCACTCAACCGGCTACGTGCCGAA 347 29 93.1 37 ..............A.....C........ CGGCCATATGGGATCTCGTCGCCATCGACGGCCCGCT 281 28 89.7 31 ....G.A.-.................... ATCCAGCAGACCGCGCAGTACAACCCCAACA G [260] 221 29 82.8 31 ..T.......T....A.A.....C..... AGCCCGGTGAGGCCGTTCACGACCAGGAAGA A [218] 160 29 96.6 0 .........A................... | T [158] ========== ====== ====== ====== ============================= ===================================== ================== 23 29 97.2 32 CCGCTCCCCGCGCACGCGGGGGTGATCCC # Left flank : AGCCCCCGAGATTTCGAAGCGTTGGTAGCCGCCCTGTATCGGAAGCTCGGCTATGACGTTGAGCAGCAGCGACCGGGGCGTCGCTGGCCAGCGACATCAGCGATGGACTCGCTGCCGGCGCACTCAGTCCGTCGTCCACGGAAGACATCACCGGCTGATATCCCTTCATCGGCTATCTCACAGCAGCGACGCACCGCAAGACACAACGACGGCAATCGCCGAGCCAGTATCAGCCGACCCAACACCATGTACGAGCGAACCCAGTGGCGACGCCTACACCCCGACACGATGCCTCCCTGCCTCCCCACCCGCGACGGCGGTACCACGCCAGGCCGGAAGACTTAGTGACCCCATCTATTTGATCAAGATGGCGGGTATAGTGCTGCGAACACCTAACTCGGACTTGCCCCCTGCGACCGCCACCTCACGAAGACTCGATCCTGAGAACCAGAGTGAATAAGGACGCGCTAGACGATCATTAGCAACGCAGGTCGATAAGC # Right flank : CGCCTGGGCCTGCCCCGTTTTGGCGGACATCTGAGATCAGGAGCCGTAGGGCTCCGGGAGGATGTCCAGCATCATGGAGAGCGTGGGGAAGAAACGGTCGAGGCCTCGGCGGGCGTTCACGCCGCAGTTCA # Questionable array : NO Score: 5.95 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.83, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCGCTCCCCGCGCACGCGGGGGTGATCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [3,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGCACGCGGGGATGATCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [16-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [31.7-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //