Array 1 3618-5304 **** Predicted by CRISPRDetect 2.4 *** >NZ_VZBQ01000143.1 Prevotella copri strain iP54 NODE_61_length_10710_cov_91.0446_ID_121, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ===================================== ================== 3618 33 100.0 33 ................................. TTTTGGTTGAAGCGTACGTTTGTGTTGCCGTCT 3684 33 97.0 34 ................................A GCGTCAGTTGCGCTCCAGTGAGCTGCCTTCGCAA 3751 33 100.0 33 ................................. TCAACACAAGATGATGAGGAGCTCCTGCTGTCT 3817 33 97.0 37 ................................C TATCAGCATCAGGAGGCGTTGCACAAGGAAGAACTCA 3887 33 100.0 33 ................................. CAGCACCCAGCTGCCGCTTTGCCTGCCAGGTCT 3953 33 97.0 32 ................................A CCGTCAGCGTAACCCTTAGAGGTACCAAAGAT 4018 33 100.0 32 ................................. TACTATTCCCAGATGTCCGGTCTCCTTGACAT 4083 33 100.0 33 ................................. TCGAGACGCAATTTAAGCGAAAGAGAAGAACGC 4149 33 97.0 32 ................................A TATCACTAAGACGTGTAAGTATGTACACATCT 4214 33 100.0 33 ................................. GAAAATACCGCTAGACAATATGAAACCAGTCTT 4280 33 100.0 32 ................................. TTTGGCATTGCCCAAAAGAAGCAAAAGGCTAG 4345 33 97.0 32 ................................A GAAGGAACTGGATAATACCGTGCAGTCGCTCA 4410 33 97.0 34 ................................C CGAAGGTGCTGGAAGGCAACTACGACAACACCAA 4477 33 100.0 33 ................................. GCCATCTCCTGCAACACGCCTCTGTTGCTTATT 4543 33 100.0 33 ................................. TCCCAGTCCTCACGCATACAGAATCCGTATGTA 4609 33 97.0 33 ................................A AACAGGTAATTGGACATATTTGCATACCTGTGA 4675 33 100.0 32 ................................. CAACAAGCACGGCTTAAAGGGAGAATACAAAT 4740 33 97.0 33 ................................A GCATGGTGGCTACAGACTTGGCATTGCTCTGAC 4806 33 100.0 33 ................................. GCAATGCGTTTCACGTTCCGATCTCGGCTTTTA 4872 33 97.0 33 ................................A TCGGGAAACCAGAAGGTTTATCTTCCCAGTGTA 4938 33 100.0 35 ................................. TGGAGAGATTGAAAAACCTTGTTATCGTTGATAAA 5006 33 100.0 33 ................................. GATAAGCAAGCAGACGGAAAATAGAAAGGTTTA 5072 33 100.0 33 ................................. ATCGTGTGACAGAAGAACTTACCATTGACGTAG 5138 33 97.0 34 ................................C TCAATACTGAAACGTTGGTTACAGATGACGATAA 5205 33 97.0 34 ................................G GTCTGTACAAGAATCAGAGAGACCAGTACGATGC 5272 33 93.9 0 .........................A......A | ========== ====== ====== ====== ================================= ===================================== ================== 26 33 98.5 33 GTCACACCCTTCGTGGGTGTGTGGATTGAAACT # Left flank : TGATGATTATCCAGTATTTTTAATCAAGTAGTGTATGTTTGTATTGATTACTTATGATGTAAACATTACCTCGGCTCATGGTGCGAAACGTTTACGCAATGTAGCCAGGGCGTGTTTGAATTACGGAAAGAGAGTTCAAAACTCTGTTTTTGAGTGTATTTTGACGGAATCTCAGTTTTTCGTATTAAGGGACCAGTTAAAAGGGATTATTGATACTGAACAAGATAGTATTAGGTTCTATATTCTTGGGAAAAATTGGAAACGTAAAGTTGAGACTTTGGGTAAGGATATGGGGCTTGACTTTACTGGTGAGCTTATCATTTAATGTATGAGGGTGCGAACCTATAGTATTGCAAAATACCCTATAGTTTCGCACCTTCTTAAAATCAGTGACTTACAAATATTATGCCTTTTATAATATTTTACGTGTAATTATTTTGCCATCTTTCGCAAAATAATTATCTTTGCATCATGATATTCAGCTATTTGCTGAATATGCA # Right flank : AGAAAACAGATTTTATTTTCTGAGCCCACTTGAAAAAGTCATTTTTACGAAAACGTGCCATTGATTGTCAATAAGTTACAATGACAAAAAATATGATTCGGGACTTCTTTAAGTGGACTCAGTTTAGTATTATACAGCAATCTCTAGTTATAAGTGTTCAGAATGTGTCTCCTCCTGCCACAGCATTTGACTCCTTCGGTCACCGCATTCGACTCCTCCAGCCACCGCATTCGACTCCTCCAGCCACCGCATTCGACTCCTCCAGTCACCGCATTCGACTCCTTCAGTTATCGCATTCGACTCCTTCAGCTATCGCATTCGATTCCTTCAGCTATCGCATTCGTCTCCTTCAGCCACTGCATTCGACTCCTTCAGCTATCGCATTCGTCTCCTTCGGTCACTGCATTCGACTCCTTCAGCTATCGCATTCGTCTCCTTCAGCTATCGCATTCGACTCCTTCAGCTAATGCAGCCGTCTCATTCAGCTAACTCTGTCGTCT # Questionable array : NO Score: 6.05 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.86, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACACCCTTCGTGGGTGTGTGGATTGAAACT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,9] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACCCTGCGTGGGTGCGTGGATTGAAACA with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.50,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //