Array 1 56689-59115 **** Predicted by CRISPRDetect 2.4 *** >NZ_NSGM01000004.1 Corynebacterium hadale strain NML00-0156 NML00-0156__17423_4, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================== ================== 56689 36 100.0 37 .................................... AGATAACCTCGCCGCGCTGACGGAAATTGCGCAGCAG 56762 36 100.0 38 .................................... TCGGAGGTCGCGGAAGAGGACGAAAAGAAGTCCGCCAA 56836 36 100.0 35 .................................... GCGATGCTGCTGGTCATGGCGCTTTTCTGCACCTG 56907 36 100.0 36 .................................... ACAAAATGAAGACACCGAAACACCCCGACGAAAAAG 56979 36 100.0 36 .................................... CAGTTGGAGCTGACGTTCCATGGCGTGGGGGAGGAA 57051 36 100.0 37 .................................... GGCCTTGCATGGCGAACGCTCCCCGCGAGGAACCACG 57124 36 100.0 33 .................................... CCGGAGACGAATTGCGCCGCATGCGCAGCAGGG 57193 36 100.0 39 .................................... TCATTCCAGATTCGGTGCGCCATGTCGTCGATCTGCTCG 57268 36 100.0 35 .................................... GTGATGATTGCGGTGCAGCGTTTCGATGTTGACAT 57339 36 100.0 36 .................................... TGCATCCCGGTCATGCCGCACCCGCCGTCAACCCGT 57411 36 100.0 36 .................................... ATGATGGTGCCCGTTTTTTACGCAAAATTCGTGGAA 57483 36 100.0 38 .................................... GATATTCTCACCGCGAACGATGACGGGCTCCGCTCCTC 57557 36 100.0 33 .................................... CCGGAGACGAATTGCGCCGCATGCGCAGCAGGG 57626 36 100.0 39 .................................... TCATTCCAGATTCGGTGCGCCATGTCGTCGATCTGCTCG 57701 36 100.0 35 .................................... GTGATGATTGCGGTGCAGCGTTTCGATGTTGACAT 57772 36 100.0 36 .................................... TGCATCCCGGTCATGCCGCACCCGCCGTCAACCCGT 57844 36 100.0 36 .................................... ATGATGGTGCCCGTTTTTTACGCAAAATTCGTGGAA 57916 36 100.0 38 .................................... GATATTCTCACCGCGAACGATGACGGGCTCCGCTCCTC 57990 36 100.0 36 .................................... CTAAAACCCGCGCCGGGCAAGACCGAAATTCTATGG 58062 36 100.0 34 .................................... GTCGTAATGGGGCCGGTAAGCATCAACGGTTACA 58132 36 100.0 40 .................................... CCGCTTGACGCGGGGCTTACCGTCGAGTTCGACGAGAAAG 58208 36 100.0 34 .................................... TTGTCTCAGGTGGATGTGCGCGCAGTGCGTGACG 58278 36 100.0 39 .................................... TTCCCGCCTGGGGCGAGGTGGTAGGGGCAGCCGGTGGTG 58353 36 100.0 37 .................................... TGGAAGAAAACAGCCACTCAAGGGGAGGACGGCCAGT 58426 36 100.0 38 .................................... CTCAACGCCGGTGGTGTGGCCCAGGCCAAGGGGCAGGA 58500 36 100.0 36 .................................... GCGAAGTAACTCACATGGGCGGCACCGCAAAGCGTC 58572 36 97.2 34 ...............G.................... TTGCTCACGCACTGCTTGCAGGTGCCGAGGTGGC 58642 36 97.2 39 ...............G.................... TGGGAGCACATGCCAGGCGGCGAGCCGTCCATGCACGGT 58717 36 97.2 35 ...............G.................... GCGGCGACCCATTTCGGCTCGGACTCTTGCGCCGC 58788 36 97.2 38 ...............G.................... GCGAACCTGGTTCTTGACCTGCAGGTTAACGTTTCGAC 58862 36 97.2 36 ...............A.................... CCGTAAGCAACCGCTCGCTGACTTGGCGGCGTATAT 58934 36 97.2 36 ...............G.................... CTGCGTGCAGAGCTCGACAAGACCGCACACCGACAC 59006 36 97.2 38 ...............G.................... GAGAACCCGCTCGAAGCAGGTGATCTCGTCCGGCAGGA 59080 36 88.9 0 ......A........G...T...............T | ========== ====== ====== ====== ==================================== ======================================== ================== 34 36 99.1 36 GTCGCCGTCCTTTACTGGACGGCCTTTCATTGAGGG # Left flank : GTGCGATGAGCCGGGACGATACACGTCGAACGCTTATCTGTTATGACATCATCAATGATCGTCGACGCACACGCATCGCGGATGCACTGTCGGAATTCGGAGACCGGGTGCAGTACAGCGTTTTTGTCGTGGACACCTCACCCGCCAGACTTCTACAAGTGAAGTCCCGCCTGAACACGATTATCGATCCAGGCGAAGACTCCATTCTTTTCTGCGATCTAGGTCGAGTAGCGGAACTGAGCGAAACAAAGTTTGGGTATCTTGGAAAATCACGGGAAGTCACAGACAATGACGCATTGATTCTCTAGCAAAATCGGCAGCATAGTTTCGAGCGCGCCGGTGTCACGCAAAACCCGGTTTGCACTCGCTCAGGGAATCGCCTGATCAGCATCGTGAACTCAATAGTGGATGACTTTTATAGCGCAACGTCTTGTAGGATTGTCGTCACGCTCGCAAAGCGCTAGATTTACCCTGTTCACTGGTGCTGTTTTTCAGCCCCA # Right flank : TTCCATGCTGCGGCACTTCGCCCTTACTAGAAACGTTCGCCGCCCCTCTGTGGGGCGGCCATTCGTTAAGGTCAGCGGCATGAGTCATCCTAGCGACCGCGGGCGCAGCGTCGGAAGTAGGGGAGGAGGTGAGGTGGGGACAACGGGGCGTCGATAAGCGATGGCCCCTGCGGTAGCGTTGGGAGCATGCATGATGACATGGCACCGAAACCCGAAGACCTCTCTATCGACGCGCCGCCGGCGGTGCGCGCGCAGCTGACGCACCGCACGATTCGCGAGTTCACCGACCAGCCCGTCAGCAACGAGACGCTGGAGACGCTGTACCGCGTGGCCATGCGCACGGCGAGCTCGCGCGGGATGCAGCACGCCAGCGTAATCCGGGTGACGGATCCGGCGCTGCGGGGGCGGCTGGCGGAGATCGGTAATCAGGAGTACGTCAAGCGCGCGCCGGTGTACCTGCTGTTCATCGTGGATTCCGCGCGCAACGCCGCCATCCTGCG # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCGTCCTTTACTGGACGGCCTTTCATTGAGGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,11] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-8.40,-7.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [46.7-35.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0.37 Confidence: MEDIUM] # Array family : NA //