Array 1 9353-6082 **** Predicted by CRISPRDetect 2.4 *** >NZ_MPKS01000028.1 Vibrio navarrensis strain VN-0511 NODE_28, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 9352 28 100.0 32 ............................ ACCAGTTGACTCAGAAAGAGTCACAGCTTCGC 9292 28 100.0 32 ............................ ATTGATATGGGCGAAGGCAGGTCACTTTCAGA 9232 28 100.0 32 ............................ TAAACTTGCTCCCGTGTCTGCTGTAAAAATCT 9172 28 100.0 32 ............................ TGGATGGTCGCGCCAGTCGAAGATAAAAACAC 9112 28 100.0 32 ............................ AGAAATCGACACGGACGTCGTGGTCGGCGGTC 9052 28 100.0 32 ............................ GTCGTGCGCTCCACGTCTGACGGGGTGTAAAA 8992 28 100.0 32 ............................ TACATCCTTTGTATTTACTGTCTTCTCCTGCT 8932 28 100.0 32 ............................ TTGGCCAGCATCCGGCCCAAGCAATGACTCTT 8872 28 100.0 32 ............................ TCGATGCTACTTACTCGATTCAGTTTCCTGAC 8812 28 100.0 32 ............................ GAATGCGTAGTGCTGCGATTATCGCGTGTTGT 8752 28 100.0 32 ............................ GCAATCCATATGTATTGGAAAGACGTGTTAGT 8692 28 100.0 32 ............................ ACGCACCACACTTGACCGCAATACCGTCAGGC 8632 28 100.0 32 ............................ AACGCGTCACGTTTCGCAATCAGTGTGTCAAT 8572 28 100.0 32 ............................ ATTGACGTTGTTACATTTCAACTTGGTATAAA 8512 28 100.0 32 ............................ GTTTCCCTGTCGAATTCACTCTTTCACTTGAA 8452 28 100.0 32 ............................ AAGTACGCAGAAATGCAAGGTCTGTTGAAAAT 8392 28 100.0 32 ............................ GATTGGCAGCTTTAGAATAACGTTTAACACTA 8332 28 100.0 32 ............................ AAATGAATCAAACTCCTGAGTTGATAGGTCGA 8272 28 100.0 32 ............................ AAATGAATCAAACTCCTGAGTTGATAGGTCGA 8212 28 100.0 32 ............................ AAGATTTTGCAAGGCCTCCAGCATGTCCGTGT 8152 28 100.0 32 ............................ TCCATCATCTCCGCCACCTCCTCAAAGTGGCA 8092 28 96.4 32 ...T........................ TGACAGCCCTGCTATTGACATAGAAAGTCCAG 8032 28 100.0 32 ............................ GATTTCAACGGCAAGATACATATAGCCCAGAC 7972 28 100.0 32 ............................ ACTTATCGGAAGTGATAAGGTCGGAACGATCA 7912 28 100.0 32 ............................ GAACAATCAAGAAATGCGCTGAGTGGGGAAAC 7852 28 100.0 32 ............................ ACCTGCGTCACTTGCTAAGGCGTTGAATAGTT 7792 28 100.0 32 ............................ GTAGAAATCGCCACGGTATGCCGTCGGCAGCT 7732 28 100.0 32 ............................ GTGGGCACTACATACTTTCAAGTCCCAGGCTA 7672 28 100.0 32 ............................ ACTTATCGGAAGTGATAGGGTCGGAACGATCA 7612 28 100.0 32 ............................ TTGTAACAGACCTTGGCCGTGTTGAGCTTTCA 7552 28 100.0 32 ............................ TCCTTGCACCGGAAACGGCGTCACGTTCTCTG 7492 28 100.0 32 ............................ TTTACGTGGGTTCTGTGTACGTGAGTGCTGGA 7432 28 100.0 33 ............................ AGTTATGGAGCGGCTGCGCATATACGAATTGAT 7371 28 100.0 32 ............................ TATGTGCCCGACGAAGCCGACCCGACCCGACG 7311 28 100.0 32 ............................ TTCATCAGCATGGTTTTCTGTTGAGGGGGTTA 7251 28 100.0 33 ............................ GTTGAGACCAACCAGATCACGATTTGCTCGTTT 7190 28 100.0 32 ............................ TGAAAACCATCAAACTTATTGAGGTATAACCA 7130 28 100.0 32 ............................ CAGGTTGCCGCTCATGCCCGCCAGCTCTTGCT 7070 28 100.0 32 ............................ GGAAAGTTCACGCAAAGAAAATGCATGAGCTG 7010 28 100.0 32 ............................ TGAATGAGCGCATAAAAGGCGCTGCGCACTTC 6950 28 100.0 32 ............................ GCTCAGGTTCAATTTATGCGGCTCCATTGGTC 6890 28 100.0 32 ............................ TTTATAATTACCCCATCACTGAAGTTGAAATA 6830 28 100.0 32 ............................ ATGAACGACTATTAAGAAAAATAGAGGTTTCA 6770 28 100.0 32 ............................ TTATCCAAACTTCGACCTCTATTGATCTTTTT 6710 28 100.0 32 ............................ ACATCCCCGCCGACCTGTACGACAAAAAGAAC 6650 28 100.0 32 ............................ ATACTCACTTCGCTCCTTTACGACACTCAACG 6590 28 100.0 32 ............................ AACACGGGCGAGCAGTCGTCGCTTGATTTTCT 6530 28 100.0 33 ............................ AGTCGCCGTCTATAACTGTTGCTTTTGTCCATT 6469 28 100.0 32 ............................ TACAGACCCATACGTTGATGACCTTGGCTCAA 6409 28 100.0 32 ............................ CTGGTTAGGCGATGTTCAACATGAAGAAGAAC 6349 28 100.0 32 ............................ GTTTAAGCGTGAATTTCTCTTAGAGTCTCAGC 6289 28 100.0 32 ............................ TATCAACGGCATTGCTAATTAAAGAATCCAAG 6229 28 100.0 32 ............................ ATGAACTGGTTGTACGCAGTGAACGTCTGTCC 6169 28 100.0 32 ............................ GACAAATGAGTGTCAAGGGGTCGTTTTTCTAG 6109 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 55 28 99.9 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : GATGTGACTTACGTAAGCTTTGTACGCAAGCAGGTGAAATCGCCCGAACGAATAGAGCGGGATATGCAGCAAAAAGCCGAACTATGGGCAGCAAAATCCGGTAAACCGCTGGTGGAATGTCTAGCGGATTTGCAACAAAGCAAGCCGACAGCATTGTGCTCTTTGCCGTTTATTTACTTGCATAGCCAGCAAACCAAGCAGCGCTCACCAGAGAAAAACAGCAAGTTCCCGCTGTTTATTGAGATGCAGCCGCAAAGCACATCACAAGATGGGAGCTTCGATTGCTATGGTTTGAGCAGCAAAGTGCATGGGCAGTCAATATTGGCGACCGTACCGCACTTTTAAATTGAACGAAAAAGGGTAGTTTTTACCCTTTATTTTTGCTCTTTAAAAATGTGCTTTAAATACAAATAGTTGCAATAGGTGGGTTTTAACAAGGTAAAAAGATGATTTTTATCCTAACATTCTGTTGCAGCTTATTTTTATCGGTTTATTCTATT # Right flank : ACAAAAACGCCACGAGCAAAGCTGGTGGCGTTAACATCAAATCCAATCATAGTAATCGAGCATTTTCGATGCGCCTGTACCCCAAGCCGTACCCAGGGTGACTTTTTCTACAATTAAAAACCTTTGAATCCCTTATTTAATGCGCTCCAGCAGTACACCTGCTTCCATGTGGTGGGTGTAAGGGAACTGGTCAAACAGGGCGAAACGAGTAATGGTGTGGGTTTCGCTCAGGATTTCGAGGTTCTCAAGCAGGGTCTCTGGGTTGCACGATATGTACAAAATGCGCTCATAGCCTTGCACCATTTTACAGGTGTCCACATCCATACCTGCGCGCGGTGGATCGACAAAAATGGTGTTGCAGTTATAGCTCTTAAGATCGATGCCATGGTCTTTCAGGCGGCGAAACTCGCGTTTGCCTTCCATCGCTTCGGTAAACTCTTCCGCTGACATACGGATGATCTGCACGTTCTCAATTTTGTTGGCGGCAATGTTGTATTGCG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [56.7-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 11815-8787 **** Predicted by CRISPRDetect 2.4 *** >NZ_MPKS01000033.1 Vibrio navarrensis strain VN-0511 NODE_33, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 11814 28 100.0 32 ............................ AATAATTCGAAGAACAAAAGCCGTTGCCATAG 11754 28 100.0 32 ............................ TGAGCTTTAACGCTTTTGCCGACTTCCAAATC 11694 28 100.0 32 ............................ AGATACACAAGTTGATCTCTCCAATGATGTGC 11634 28 100.0 32 ............................ GGTTACGCTTTTATTTGCCAATATCGCACTTG 11574 28 100.0 32 ............................ AATACCGATAAAGCCGCAAAAATCCTCACCAC 11514 28 100.0 32 ............................ GTCAGGACTAATAGCGCATCGCATTGACTCAT 11454 28 100.0 32 ............................ AGTAAGTGTATTTTGCAACGCTTCAGCTTCAT 11394 28 100.0 32 ............................ GAACCTTGGAGCCATTCCGAAAGAGGCGCAAG 11334 28 100.0 32 ............................ ACTTTTCGCTTTGGTTTGTACTCAATCAGCTT 11274 28 100.0 32 ............................ AACTTCGTGAACTCAAATCGCGTGCAAGACGT 11214 28 100.0 32 ............................ GAAATCCCGTGCCGTGAATCGTCACCGTCACG 11154 28 96.4 32 A........................... ATTTGGCTTTCACGTTTCCCTACTCGTCTTTG 11094 28 100.0 32 ............................ ATATTAAAAGCCTCCACAAACACATAACGCCC 11034 28 100.0 32 ............................ ACTGGACGAGAATTCAATTCTGATACTCAAAA 10974 28 100.0 32 ............................ TTTGGGGAGTTCCATCCAAGCCGCGGGATTCT 10914 28 100.0 32 ............................ GCATGCAGGGATGGCATTTTCTTCGATCACTT 10854 28 100.0 32 ............................ ATGCTCTGAAAGTCGCAGTTGCCGCACTTGCA 10794 28 100.0 33 ............................ CGTCCCGGACTCACCAACGCAACAACAAACCGT 10733 28 100.0 32 ............................ ACGCAAAGAAAAACGGTGGATTACATACAACC 10673 28 100.0 32 ............................ CACGAGATACTCGATGCGCAGTTGAAAGACTT 10613 28 100.0 33 ............................ TTCAACCACCGCTGATGGTTCCAAAGTTTTGAT 10552 28 100.0 32 ............................ TTTCACTTTACTTTGCTTATGACTCCCATCTT 10492 28 100.0 32 ............................ AGAATCGGTCGTCCATGTCCTTGGCCATGCGC 10432 28 100.0 32 ............................ AGCATGGGACAACTGAAATACTTTCACAGCCA 10372 28 100.0 32 ............................ GCTTGGGTCAGTCGTGTAGCTGGTTACGATAC 10312 28 100.0 32 ............................ CAACCGTGAATATGAAATCAAATTTGGTTCTA 10252 28 100.0 32 ............................ ATCGTAAGTGCCAGCGTTGAATTGCTCGATTT 10192 28 100.0 32 ............................ TGCTTATGACGTTGAACCAGAGACAAATCCCT 10132 28 100.0 32 ............................ ATAATTCCATCGAAAAAGAATTTGCCGTCTAC 10072 28 100.0 32 ............................ ATCCGCTCATCATTCGTCTTCGCATCAATTGA 10012 28 100.0 32 ............................ GAAAAACGCACGACGCATCACTAAGCAGGTGG 9952 28 100.0 32 ............................ TTCTGCTTCCAGTTTCTCTCGTTTAGCCTGTT 9892 28 100.0 32 ............................ CTAACTTTCGGCTAAATCGAATGAGCGCAATT 9832 28 100.0 32 ............................ AAATGTTTTTGCCTTCGGGGGCAAACCATATG 9772 28 100.0 32 ............................ TGTTCTGTATCTTGCTTGTTGTGTTCTCGATT 9712 28 100.0 32 ............................ ATTTTTAATAGTAATTTCGGCACCATGCACAC 9652 28 100.0 32 ............................ TTGAAATCAGCCGGACGTTGATTATCGAAATC 9592 28 100.0 32 ............................ TTCTGTGCGACTCTACGCAGCTTTTCCATGCA 9532 28 100.0 32 ............................ AACAGGAAGCTCTCTTGAGTCCGTTTCGTAGT 9472 28 100.0 32 ............................ TGCCACACGTCCAGCGCGTACGGTTTCGGTGA 9412 28 100.0 32 ............................ CTTAAAAGCGCGTCTTTGAAGTAATCAGAATT 9352 28 100.0 32 ............................ AACAGGCGCTATCACCATCGAACAAACCTTCA 9292 28 100.0 32 ............................ GAAGTCGTTTAACGCATAAGGTAACCATAATT 9232 28 100.0 32 ............................ TGTCGGCGGTCTGCAAGTTCTCAAACGTAAGA 9172 28 100.0 32 ............................ TTTCACTGTAGTTATCCCGTATGAGTTAAGAT 9112 28 100.0 30 ............................ TAGTGCAAGCTTCCCGTGGTGGTCGTGGTT 9054 28 100.0 32 ............................ TCTGTAATCTGCATAACTTGAGTGACATAGTA 8994 28 100.0 32 ............................ TTGTTACGTCTGTTACGGTACGGTACGCGGGG 8934 28 100.0 32 ............................ AATATCATGGTGCGGTGTAGGTTATTGTCGTC 8874 28 100.0 32 ............................ TGCACACCTAATGTTCCCCAGTGTTCATAGCC 8814 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 51 28 99.9 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : CAAATCAGTGAAGTGTTAAGCGTTCCTGAGCAAGTTCAATACCGGGTGATCTCAGCTAAGCGGCGCAATTTAAGCAGTGCAAAGCTGCGGCGCTTAATTGCACGAGGGAGTATCAATAAAGAAGGTGAGCAGCGCTATAAAAAGAAGATGCTGAGTCAGAGTATTAAAGCACCTTATCTTGACTTACAGAGTGGCTCTACAGGGCAAAAGTATCGTAAATTCTTTGAGTTTGGTGAAATGCGGTCAATACCAACATCCGGAAAGTTTGATTCCTATGGGTTAAGTCAGTCAGCTACCGTTCCTTGGTTTTAATGTTGTCGAGGGAAGCTTTCGTTAAATTTGTTTTTACTACGTAAAAAAGGCATTTTTACCCTTTATTTTTGCTCTTTAAAAATAAGCTTTAAATACAATGAGTTACAATAGGCGCTTTTTAATAAGGTAAAAATGCAATTTTTATCCTAACTAACTGTTGTAACTTATTTTTATTGATTTATTCTATA # Right flank : GCCGATTGATTGCAGCTTGCGAGCTACGGCGAGTTTGATAAGGTGAATAGATTTTGCCTATCTAATTGGGCTGTATCGTTATACCTGAGGTAATACGTTAAATGCTAAATTAGCAAAATATCTTACACGTTTATGTCCAAAAATGAGCTGGAGCGTTACCGATGCTTATTGACTAGGCTGCCATTGGCAGCCTAGTCAAATTCAAAACAGGTTCAACGGTCTTGATGCTTCTCCAATACCGCCGCGATCGCTTGGTCGAGTTCATTTTGCACGTCTTTAGACAAGCGGCCAAACTCGTACGAGAAATTACGGCCTTTTACTCGCTTACGGGCAAAAACGCCTTTGCTGTTAAACTGGGCGAGGGGGGTCACTTCCGCTTGCTCTTTAACTTGTTTTGCTTCAGTGATTTTTAACTCTGCTTTTATCGCGGCAATGATGTCTAACTTGGTTTCATCAAGGGGCTGTTCAGCCTGAACATTGACAAATTTCTCCTGAACGCG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-81.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,5.51 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 1132-109 **** Predicted by CRISPRDetect 2.4 *** >NZ_MPKS01000044.1 Vibrio navarrensis strain VN-0511 NODE_44, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ======================================= ================== 1131 35 88.6 36 TAGC............................... TTACATTTTCTGGGCAATCGTTTCATACAATTCAAA 1060 35 100.0 36 ................................... CAAGGAAGAAAGGGAAATTAAGCTGATTGAGTACAA 989 35 100.0 37 ................................... TTACGCGCCGCATTCCAGACTACAACATGGCAGTTAA 917 35 100.0 34 ................................... GCATGTTAATTTAAATCCATATAAGGAGAAATAA 848 35 100.0 37 ................................... TGATAAGAGACACATTCTTATCAGAGGGCAAAGTTTG 776 35 100.0 37 ................................... ACATAGCTAAAGTTGAAGAGTGCTTTGCATTAGTTAA 704 35 100.0 36 ................................... TTCAAAATCATCATGGACACGTTCCAAGAACGCGAC 633 35 100.0 34 ................................... TTACAGAAGAAGAACAGAAGAAACTTAGTGGTTA 564 35 100.0 35 ................................... GTAAGCATGAGCGTATTACCGAGAAGAAAGCGACA 494 35 97.1 32 .....................A............. TTCAAATACGACGAGCTTGAGATGGAGGAAAT 427 35 97.1 36 .....................A............. AGAGAAGCACGTGAAGAAGAATGGCAAACCTTCAGC 356 35 97.1 39 .....................A............. TTATCAACAATCAGCAAATCGACACTATCCCATTCTTTT 282 35 97.1 33 .....................A............. CAACCTGCGGATGAAAAAGATGCTTATGTGTTT 214 35 97.1 36 .....................A............. CTGTCATTAGTTCCTGATAATTACAAGTTCGTATTG 143 35 68.6 0 ................T.TAG.GG..A.C.A..AT | ========== ====== ====== ====== =================================== ======================================= ================== 15 35 96.2 36 GTCTCAACGGTCTGAACGACCTTATCTAATGAAGC # Left flank : CCCTTGCAACGTCAGCAGGGTGGCGAAATCATTCACCACATAAGAGAGAGGACGAGGTAAATACTGCGAGCCACCAAATAACTGGCAAAACAGCACCCAATCGTAAGCAGGGCAATCAGCCCACAGTTCGACTCGTTCATATTGACTGAACCAGTGTTTAAGCTGGTGGGCAATATTTTCATCACTATCAAAACCATACCGCACCTCTCCCTCTTGCAACCACTCACTTGGCGCGCAAGAAGGTAAGGATAACCAGCGAGTATGAGCAAGCACATGCTCAGCAATCCAGTTATCCACTGAAGCTCCATACCTTGCTTGGCACTCTGCATAAAAAGCCCTGCCATGCTCATCGACCAATGCAAGGCTCAGTAGCTCAGCATCTTGCTTCAAGCCGGTAAACTCTGTATCCAAAAATAAACGCATACCACTTCCAAGTTATCGCTGTTGCTTTAAGTATAACTAGGTTAACCACCAATACCGAGTGTCAGTCCCTACCTAAA # Right flank : TTGGCCACGGTTTTAGAGTTTTCCCAATACAAGCGTTCCGATTCATTGGGCGTTAACCCACCGTTATACTGATGTGGCCTAAGTTGGCTGTAATATCCAATAATGTATC # Questionable array : NO Score: 2.99 # Score Detail : 1:0, 2:0, 3:0, 4:0.81, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCAACGGTCTGAACGACCTTATCTAATGAAGC # Alternate repeat : GTCTCAACGGTCTGAACGACCATATCTAATGAAGC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:54.29%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.90,-5.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [11-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.41 Confidence: LOW] # Array family : NA //