Array 1 1080407-1080633 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_BDUN01000001.1 Staphylococcus aureus strain M1C017, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence               	Spacer_Sequence                        	Insertion/Deletion
==========	======	======	======	==============================	=======================================	==================
   1080407	    30	 100.0	    39	..............................	ATGAAGAAGATTAAAGGAACACAGTTGGATGCTAAGGGA	
   1080476	    30	  93.3	    36	...........G....C.............	CTCAAGGGGAGTAAAGGAATACAGTTGTTTGTGCAG   	
   1080542	    30	 100.0	    32	..............................	GTGAAGAGGAACGCAGTTGGCTTGCTTGCGCA       	
   1080604	    30	  93.3	     0	............TC................	|                                      	
==========	======	======	======	==============================	=======================================	==================
         4	    30	  96.7	    36	CAACTGCATAAAAGCCTCTAATCGCTAAAG	                                       	       

# Left flank :   AACATTATTAACATGGTTAGCACGACATCATTTCAATTATCAAGAGATTAATGAGAGATATAAAGCTGAATTAAGAAAAGAATTATTATCTTTGAAAGGTATTGGAAGTGAAACAGCAGATGTCTTACTTGTTTATATATTCGGACGTATTGAATTTATTCCAGATAGCTATACAAGAAAAATATATGATAAATTAGGATATGAAAACACTAAAAGTTATGATCAATTAAAAAAAGTAGTCACATTACCAAATCATTTTATAAATCAAGATGCTAATGAATTTCATGCTCTGTTAGATGTATTTGGTAAACATTACTTTAGAGATAAAGATATAAAGAATTATGATTTTTTAGAACCTTACTTTAAAAAGTAAACGCTGTGAAGTTAGATAGATGAGTTTATATGAAATATAAAAAAATAATTTACTATTTTCTTTTAGTATGTGGACTTATATAATATATAGAAGCATATAAAGAAAAAACAGTTGTTTGTTTGTGCAG
# Right flank :  GCGAAAAGTGGGATTAAAAAGGAGATGTGATAATGTGAAGAAATCGTTAATTGCTTTTATTTTGATTTTTATGCTTGTCCTGAGTGGCTGTGGTATGAAAGATAATGATAAACAAGGTAGCGATGATAATGGCTCGTCTAAATCGCCGTACCATAGAATTGTTTCGTTAATGCCTAGTAATACTGAAATTTTATATGAATTAGGATTAGGTAAATACATAGTTGGTGTTTCAACGGTTGATGATTATCCAAAAGATGTGAAAGAGGGTAAGAAACAATTTGATGCTTTGAATCTAAATAAAGAGGAACTTTTAAAGGCAAAGCCAGATCTAATTCTTGCGCATGAGTCGCAAAAGGCAACTGCTAATAAAGTATTGTCATCATTAGAGAAACAAGGCATCAAAGTAGTGTATGTTAAAGATGCACAATCAATTGATGAAACATACAACACATTTAAGCAAATTGGGAAATTAACGCATCATGATAAGCAGGCTGAACAAC

# Questionable array : NO	 Score: 2.70
# 	Score Detail : 1:0, 2:0, 3:0, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     CAACTGCATAAAAGCCTCTAATCGCTAAAG
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:60.00%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  R [-0.30,-1.30] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [2-2] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [73.3-70.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [0.41,0.37   Confidence: LOW] 

# Array family : NA
//