Array 1 3707410-3705732 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP025049.1 Pseudomonas aeruginosa strain PB369 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 3707409 29 100.0 32 ............................. GGATTGCTTCGCCCATCTGCCGGGCCTTGCGA 3707348 29 100.0 32 ............................. ACCGGATGCAGTCTTAATCCCTTTTTGCGTCG 3707287 29 96.6 33 ............................A GTTATGCTGGTGCTGTCATAGATCATGTCGAAC 3707225 29 100.0 32 ............................. CTCTACGACGAGAAGTTTGGCCTGTCGCTACT 3707164 29 100.0 32 ............................. TCTATGGGAGGTGGGGAGTGAACGAGACCGTA 3707103 29 100.0 32 ............................. TTGAGGGCAAACGACGTTTTGCCCATCGAGGG 3707042 29 100.0 32 ............................. TAACGGCCCGCCCCTTCACGCGACCTCCCGCG 3706981 29 100.0 32 ............................. CCAAGAAAGAACGCCGAAAGGCCGTTAGGAAA 3706920 29 100.0 32 ............................. CGGGCCTTGGCAGCGAGCAGGGCCTTCATGCC 3706859 29 100.0 32 ............................. CGCACTGATGCCAGAGCCGGAGTCGCGACCGG 3706798 29 100.0 32 ............................. TCGGCCATCACTGGCAAGGTGCGCGAAGGCGT 3706737 29 100.0 32 ............................. GCGCTTCACGGAGACGGCCTGCTGTTCCCTGC 3706676 29 100.0 32 ............................. TTCAGCAGGGCGTCAGGGATGGCATCGTGTCC 3706615 29 100.0 32 ............................. GCTACTGTCGAAGCCGGCACCACTCTGGACGC 3706554 29 100.0 32 ............................. GCCGGATTCCGCTGCCGGGCTACATCATCCCG 3706493 29 100.0 33 ............................. CGGGGCATGACTTCAACCCACCCCCAGCCCTCC 3706431 29 100.0 32 ............................. TCGCACTTCCAGCCATGGCTGGACAAAGCGGC 3706370 29 100.0 32 ............................. GCAGTCAAGGCTGCCGGCGGCCAGTCCGCCCT 3706309 29 100.0 32 ............................. GCCAGCAGGGATGCCAGCACGCAGCCAGTCGC 3706248 29 100.0 32 ............................. CAGTGACGGCAGCAGACGCGGCGATGCTGGAT 3706187 29 100.0 32 ............................. TCGGTAGACGCACAGATGGTCGAGCAACTTCG 3706126 29 100.0 32 ............................. GCGCAGGGCAAAGCCAAGGTCACCGCCGGCAC 3706065 29 96.6 32 ...........A................. TTCGAGGTCAGCGGCTTCGGCCCCGGCGAGCA 3706004 29 96.6 32 ...........A................. CCGGGAATGAACGTTCCCATGTCGGCTACGCC 3705943 29 96.6 32 ...........A................. GTCGCCAGGCCCACGTCGGCGGATCACCAACA 3705882 29 96.6 32 ...........A................. ATGTAGCTGTTACGCGGTCCCGCGGTGCTGAG 3705821 29 96.6 32 ...........A................. GTGATGGAGCGGACCGCCCCGAGCACCGCAGA 3705760 29 93.1 0 ........T..A................. | ========== ====== ====== ====== ============================= ================================= ================== 28 29 99.0 32 GTGTTCCCCACGTGCGTGGGGATGAACCG # Left flank : TGACCCGCATCATTCCCACCATCGAAGAGGTACTGGCCGCCGGCGGCGTCGAACCTCCCAGCGCACCGCCCGAGTCGGTGCCGCCAGCCATTCCCAACCCGGAGGGAATCGGCGACCTCGGGCACAGGACGCAAGGGTGAGCTTCCTGGCCGTAGTGGTGGAAAACGTCCCGCCGCGCTTGCGCGGACGTCTGGCAATCTGGCTGCTGGAAGTCCGCGCGGGCGTCTATATCGGCGATGTATCGCGGCGTACCCGGGAAATGATCTGGCAGCAGCTGAGCGAGGGCTACGAGGAGGGCAACGTGGTAATGGCCTGGGCCGCCGCCAACGAATCCGGCTACGAGTTCCAGACCCTGGGCGTTAACCGTCGACATCCAGTGTTGTTCGACGGGCTGCAATTGGTGGCATTCCAGCCTCTGGATCGGACCACGGAATAGAGGATGAGGCGGTAGATTTTTCGAGGTGTTTTTTCTTCTTTAAAAACAATTCTGTACGGTAAGT # Right flank : TGGAAGTACGCTCGCGCAGCGAGGATGCGATATATGCACGGGGCGAGCCGTTCACTTGAAAAGCCGACATTCCTGGCTGTCCTGTATTTCCCCTTTGGCATGGATAGAGCAGCCCCATAGGGCGAACGACGCCACCGGCGTCATTCGCCATGGCCGGGTCAACCGGAACGTCGAGCGGCTACCAGGCGCTGCTGCAGGCGCGTCAGGAAGGCCACTTCGAAGGCGGTCTTCTGCATCGGTGTGGGCAGGCTGTCGCGGCCGAAGGCGAAGGCGGTCCAGAGCTGGCCTTCGATCTGGTCGGCAAGCCAGTTCTCGGCCTGGCGGACGCCCTTGTCGATGGCGGGCTGGGCGGGAACCGGCCAGAGCAGGGATAGACCGGGTTGCCGGTCGGCGGGGGGAATCTCGACCATCAGGTCCTTGTAGCGTTCGATGATTGCGTCGACGTGGGTCTTTTCCTTTTCATCCTTCGTCATGCTGGGTACTCCGTTTCTGAGAGTCAC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCACGTGCGTGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCACGTGCGTGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.60,-11.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [41.7-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 3717709-3716582 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP025049.1 Pseudomonas aeruginosa strain PB369 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 3717708 29 96.6 32 ............................A GCAGGATTTGGAGTCGGAGCGTTTACCTACAT 3717647 29 100.0 32 ............................. GTGAACGATGCGAATCGGGCGGGGGTTTGGTC 3717586 29 100.0 32 ............................. GCTTGGTAGATGCCTGGAACAAGTCGGTCAGC 3717525 29 100.0 32 ............................. CGCGCTGTCCTCGGCCTGGACTGGACCATCGA 3717464 29 100.0 32 ............................. TGGGCGAACGACGGCAGCGTCACCCAGGCGCA 3717403 29 100.0 32 ............................. ACAGGGACGTTCTCCGCGAGCTGGCCATCGAC 3717342 29 100.0 32 ............................. GCAGAGCGGATTGCTGCCCGCTTTGTCGGCAC 3717281 29 100.0 32 ............................. GGGGTGGTAGCACCGGACTCGCGGATCTTGAA 3717220 29 100.0 32 ............................. GCGTACATGACTGAGGGAGAGTCCACGGACCT 3717159 29 100.0 32 ............................. TCATATAGCTTGTATTTTTCCTTGCTATGAGA 3717098 29 100.0 32 ............................. AAAAACGACGGCATTCACTACGCGCGCCAGGC 3717037 29 100.0 32 ............................. GCGTTCATTTCCCAGGACGTGGACCAGCTGCG 3716976 29 100.0 32 ............................. GCCCCAAAAAGCGTTGGCGTCATCGGCTGGCT 3716915 29 100.0 32 ............................. TTCATGAACGGCAGAACGTTGAGCGCCGATTT 3716854 29 100.0 32 ............................. GTTGTTCTAGAGTCCGTTCAGGAGATGCTTCT 3716793 29 100.0 32 ............................. AGGTATTCCTTGCCCTTGGCCAGGAGCACGCC 3716732 29 100.0 32 ............................. TCATCGATCGTGGCGGCTGCACTGGCTGCCTG 3716671 29 89.7 32 ..............C..........G.T. GTATCGACATCGATGGTGACCAGGCTGGTCCG 3716610 28 79.3 0 A..........A..C.....-..A....T | C [3716601] ========== ====== ====== ====== ============================= ================================ ================== 19 29 98.2 32 GTGTTCCCCACGGGTGTGGGGATGAACCG # Left flank : GGCATCGTTGTACAGGGCGACGAATTCCGCGCCCCAGAACAGCACGATCTGCGCCTTGGCCGGCAGCAGCGTGGCCATCGTCGTCTTCAGGCTCGCCGACCAGGCGTCCGGCGGGCCGAGGGGCGAACCGGCCGCGTCGAGGCTGAGCAACAGTTTCCCGACCGCTCCTCCGTTGGCCAGGAAGGCCGGTGGATGGTCGAGGGTGTTCGGGTCCGGTTCGATGGTGAAAGGCTGTGCCATGTCTGCGGAGTCTTGCTCGGTTCCGGTTGAGGTGGTGGGTTGCATGGAATATAGGAGGGCGGTGGGTGCGCTTGCGTTCAATCAGCTTGGGGGACCGCGGGATCCCGATGCGGGTAGGTTTCGAATGGTCCCGAGGGAGCTGCCGGATTAGGCTGTGGGATGAGTACGGCCCTCATTTCCAGGAGCGGCGCGAGGGCCGCTTGGCCCGGTGGAATTTTGCTGTTGTTTTTCTTTTTTTAAAACAATGGGATACGGTAAGG # Right flank : GTCTACGCTCCTGCGGTTCGCCCCACCGCGCGGTATTTCCCATGGTGGGGCGAACCGCGCGGCACTACGACCAGTGGCGTAATCACCAGTGTCAGCCGCCAGTTGCCGGAGACGCGGATCGCCCACCGTCCGGCAAGATCCTCTTTCAGGGCATGGAGTTTCCAACCAACCTGGTTCACGTCGCTGGGGATGCAGGCTTCGCTCAGCACGAATAACTGACGGCGCAGGCATTGGGCGGGGGCTGCCTGGATACCTTGCCCTTACCGGTCTCGAAGAAGGCTTCCAGCCCCCTGTGGCGGAAGGAAATAGATTGTGAACAGGCGGCAAGTGAAGGTTGTTAGTGAGTTAGCGGAATGTCCGACGTTCGCTGTTGCACCATGGAGTTCCTGCTAATTTGGACAGGGGTGGTCGGTCCGGTCCATATCCCTCCTGCGCTCCTTCGCTTGCTAAACGGGGGGAGCAGGCGCATCCCTCGCTGGCTGCTCCTTGACGAGCGTCAT # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCACGGGTGTGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCACGGGTGTGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.60,-11.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [30.0-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //