Array 1 4889756-4887713 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP010557.1 Raoultella ornithinolytica strain S12 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 4889755 29 100.0 32 ............................. CCTCCGATCCCTGGCGATAAGCCACTTTATGC 4889694 29 100.0 32 ............................. CCGTCACAGCAGGCCGTTGACGATCTGACCAA 4889633 29 100.0 32 ............................. CCGTACAGCCGTACATTTTTACGTGGGTAAGC 4889572 29 100.0 32 ............................. TTCAAAGACCATCTGAACAAGCACGTTTTTAT 4889511 29 100.0 32 ............................. TCCCGTGAGTGATTCCAGCCTGCCTGCATCGC 4889450 29 100.0 32 ............................. GCTGCGGTTCCACTTCTTCCATGCTTCCTCGG 4889389 29 100.0 32 ............................. TTAGATACGTTACTCATGACCCTTACCCTTCA 4889328 29 100.0 32 ............................. GATGATCTTATCTGGACGACTCCAGCAGAACA 4889267 29 100.0 32 ............................. GTTCCTCCTAACTCCCACGTCGCAATTAAATC 4889206 29 100.0 32 ............................. GTCTGGAACCGGCGGGGCGTCAGCTGCTTGCC 4889145 29 100.0 32 ............................. TCGGCACATACGAGATCAATGCTACCGCTGGC 4889084 29 100.0 32 ............................. CCGCCCAATGCCTGCATGACTTTGTTAACAAC 4889023 29 100.0 32 ............................. TCCTCGATACCGTTGCAAATGACGCTGGCGGT 4888962 29 100.0 32 ............................. TCTTTGATAGTCAATTTTCCTACAAGGTCGCC 4888901 29 100.0 32 ............................. GTGAAGGAAGGGCTGCAGATCACTGCAAAGCT 4888840 29 100.0 32 ............................. GTCAGCGTGGCGTTGCTTGCGATGCCTTTGGC 4888779 29 100.0 32 ............................. CGAGGATGAAGAACGGGAAGAACAATCAGAGC 4888718 29 100.0 32 ............................. CGCTTGGGGGAGCAGCCACACAGGCAACAATG 4888657 29 100.0 32 ............................. CCATTCAAGAACGGCTTTATAGCCCCTCCCTG 4888596 29 100.0 32 ............................. CTATTCGGGATGGTGTCAAACTGGATTTCACT 4888535 29 100.0 32 ............................. TAGAAAACCTCGGCGGCCTCTACCTGCTTATT 4888474 29 100.0 32 ............................. CCTCAAAATCCCCCTTCTCTCCCGGCCTGTTC 4888413 29 100.0 32 ............................. CGATAGCCCTCGTCCAGTCCGGCCAGATTTCA 4888352 29 100.0 32 ............................. GCTCGGGTCTGGATATCGCGTACCCGATCAGC 4888291 29 100.0 32 ............................. CAATAATGAGGGTAATAGCAATGCGGCTCTGT 4888230 29 100.0 32 ............................. GTCACACGCCGCGTACTGCCATTAACAATGGT 4888169 29 100.0 32 ............................. CGGTTTGATTGCTTTGCAAAAGCTGAAGTTTC 4888108 29 100.0 32 ............................. GTGAGCCATATTTATCTCCATACACTCTGAAG 4888047 29 100.0 32 ............................. ACGTCAATACGCGCATCATCGTTGGCCGGCAC 4887986 29 100.0 32 ............................. TCTGCAATTATGGGGGCAACCGCTCAGAATGC 4887925 29 100.0 32 ............................. CTGTGTCGGATGGATGCGAACTCGCGCGTTGT 4887864 29 100.0 32 ............................. TCTCTGGCCTTCATGGGATATGCATATTACGA 4887803 29 96.6 32 ..........T.................. CGAGGTTCAGGCACAGTTCCAGAGCTACGAGA 4887742 29 89.7 0 .............T..........T...C | G [4887716] ========== ====== ====== ====== ============================= ================================ ================== 34 29 99.6 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGGCAGCAGGTGAAATACTTCCACCGCAACCAACCCCCGATATGCTACCTCCGGCAATTCCTGAATCGAAACCTATTGGAGATTGCGGCCATAGAGGGCGTAGTGGATGAGTATGGTTGTCGTTGTGACCGAAAATGTCCCACCGCGATTACGAGGTCGGCTTGCAATCTGGCTTCTTGAAATACGAGCTGGAGTTTACGTTGGTGATACTTCAAAACGCGTCCGTGAAATGATCTGGCAACAAGTTACTCAACTTGGCGGCTGTGGGAATGTTGTAATGGCCTGGGCAACGAATACCGAATCTGGTTTTGAGTTTCAGACATGGGGAGAAAACCGCCGTATGCCGGTAGATCTAGATGGGCTTCGGTTGGTTTCATTTTTTCCTTTTTAAAATCAATAGAATAACGGTTCTTTAATAATACAAAATTGTTACAACCAAGTTGGTAGAGTGTTGGTTGATGGAAAGGTTATTGAAAAATAACAATATATTTTTAGT # Right flank : TTCCTGGCTGACCAGCAAAACTCCGGCTAGCCGCGCTTATCGGCCTTCGCCAGCTCTTTCACCAGCGGCAGCATCACCTTGACGACGTCGCGGCTGCGGCGTTCGATGCGCCCGGGCAGCGCTTTGTCGATATGCTGCTGATTATCCAACTGAACGCTGTGCCAGCTGGAGCCGTCAGGGAAGGCGGGTGATTTTGCCCGCTGCTGGAAACCATCTTTCTTACCAAGCGACCAGTTGGTGGCCTCCACCGACAGCACCGGGATCCCGGCGCTATCAAAAACGCTGGCGTCGTTACAGCAGCCGGTGCCCTGCGGATAGTCGCGGTTTAGCCCCGGGTTGCTGAAGGCGGCAACGCCTTTGCTACGGGCGATGGCCAGCGCCCGGTCGCGGGTGAGCTTGCGAATCGATGCCGGCGTGCTGCGACCGCTATTAAAATAGAGCTTGTCGCCGACCACCAGATTATCGAGGTTGATCACCAGCAGGGTGTTTTTCTTCTCCGC # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [40.0-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //