Array 1 64212-63043 **** Predicted by CRISPRDetect 2.4 *** >NZ_CM018433.1 Chlorobium phaeovibrioides strain GrTcv12 plasmid pl1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 64211 28 100.0 32 ............................ TCACGCAGGATATCGTCCCACCCCTTATCAAT 64151 28 100.0 32 ............................ GGTAAAGATGGGGCAGGATATGGACTCACTCC 64091 28 100.0 32 ............................ TAAAAGATGTTCCTGTTTCACTTCCTTTAATA 64031 28 100.0 32 ............................ CAGCACGGATGCCGCTTCCTCGCCCGTACACT 63971 28 100.0 32 ............................ TAAACGGAAGCCCATCAATTGAGCTTGCCGTC 63911 28 100.0 32 ............................ AGCACAGGATTGCCCTCTGCGTCCAGCGTAGG 63851 28 100.0 32 ............................ TAATGGTTTGAGCGCTGCGTTGATAGCATGAA 63791 28 100.0 32 ............................ TACACGCCCAAAGGCCGCGCATGGCGGCCCTG 63731 28 100.0 32 ............................ AAGCATGCAATCTTTTTTGCTGGAGCCGATAA 63671 28 100.0 33 ............................ TTCTCCGTCTGCTGATAAAAGAGAAGGCGACGA 63610 28 100.0 32 ............................ TCTCAGGTAGGCGCCATGCAAAGATGCGTATC 63550 28 100.0 32 ............................ AATGAGTTCCTTGACCTTCTTTCCTATACCAC 63490 28 100.0 32 ............................ TCATACTTCTGTCAAGTTGCGCTTCAAGTTCC 63430 28 100.0 32 ............................ AGCTTCAGGTCGTAGAGTCCAGACTGCAGGGC 63370 28 96.4 32 ..........................C. CGCTACTTCGAGCTGAGCAGTAAGTACACTGA 63310 28 100.0 32 ............................ TATCATCAGCGCATCCGACGGCGACAAGTTTC 63250 28 100.0 32 ............................ GCGAATAACGCGATAAAGGTAACGCCTATAGT 63190 28 100.0 32 ............................ CACATCGTTGAGGTTCATACTGTAGACGGAAC 63130 28 100.0 32 ............................ GTAGGGTGTCGATTCTTGCTTTCGCGCTTTCC 63070 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 20 28 99.8 32 GTTCACTGCCGCATAGGCAGCTTAGAAA # Left flank : GAACGTTTGCAACAATTATCAGGACACATTGCCGCATCAGCAATCCGTGATCATCTGAAAATCGGGAACATTCTCGAGACCCCTGAGACAACAGAAGCGATGACGGTAAGAAGGGTACAATGCAAAAGCAATGTAGAACGACTTCGGCGAAGGTATATGAAAAGACACGGCGCTTCGGAACAGGAAGCACAATCAATCATACCCGAAAACTCTATGAAGCATCTCAGCTTGCCTTATGCCACACTCTTCAGTCAGAGTACAGGACATTCATTTAGGCTCTTCATTCAACAACAGAAAGTCACTACCCCTGTTAAAGGACTCTTTAATTCTTATGGATTAAGCGATCACGCCACAGTCCCAATGTTTTAACCCTAATTTCCGCTTAAGCCGCCACAACATTTAAAATCAATAAGATAGCAACCACTCATCTTATGATGGTCATTATGATGAATTTGCTGAAAGCCCCAGGTTTTTCAGTGCGTTCGCTATTTGCGCGTCTA # Right flank : AAGGGTGTAACGCCTTCTTCTATCGGTATGTTGTTCACTATCAGGAATGAGATGCCATCATAGGGCACTTCTGAATGTTACAAAAAAGTGCTGGGATTATTTCGAACGGATTCGCCCTGAGCCGGGCACCACTCTCTCGTCATTTTCTTCTTGATCTTCTCCATTCCCATGGAGCAATCGGCTGAGGCTCAGACCACAGCCCGATCCGCCTGCTTCGCGCTGCGCTTTCCAGCCGGGCAAGCGAGATGTCCGATGAGTATTGCCGGTAGTGCCAGGCCAGACCGGCGCTGAGAAGTTCGCGGTTAAGGGAACGTCCATTCACTGTAACCCAACCGATTGTACGACCATATCGATCTTTATCGATTCGATCAACTTCGACAACTTTACCAAACACCATGTCACTGGCAAACTGCTTTGCCTTGGTGCCGAAGGGCTGTTTCTTTTCCGGACAATCGATACCGTACAAACGGACTTTTTCCTGATAATTGCCGGGGAGTAGC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //