Array 1 30682-27475 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJAEM010000040.1 Thalassolituus sp. TTPB476 NODE_41_length_54081_cov_212.004379, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 30681 28 100.0 32 ............................ ACCCCATTGAGACGATGATCGCGGAGACGCTT 30621 28 100.0 32 ............................ AGTCGGGATGGCTGGCATTTAACCGACCACCG 30561 28 100.0 32 ............................ ACGCCGGTATGCAGGAACCGGAGTCCGGACAG 30501 28 100.0 32 ............................ CTTGATTTGAATGAGTTGTGCATTAAACACCC 30441 28 100.0 32 ............................ TGGAACACCTGGCCGAGCGCCTGCGGCGATCC 30381 28 100.0 32 ............................ TGCCGGGGTAAGCTGGCGTGGATCGATGGCCA 30321 28 100.0 32 ............................ AGCCGGTGGCGTTTGATATTCAGCCGCGTCAT 30261 28 100.0 32 ............................ TGATCCAGCCGTTAATCAGCTTAATCGGGCGG 30201 28 100.0 32 ............................ AATTGAGGAAACGCCACCAACAGGAACGTAGG 30141 28 100.0 32 ............................ GTTAAATAATCCAGCACAACCAGCGCCGGGTT 30081 28 100.0 32 ............................ AGATGGTGAGGCGGGAGCGCGGCAACACTATC 30021 28 100.0 32 ............................ ACTTCGGAATCGATCCGGACGACGTAAGCTGG 29961 28 100.0 32 ............................ ATCCTATTTGAAACCGGCGGTCATTATGACGA 29901 28 100.0 32 ............................ TTTGCGGAAAATACGAATGCGAAGCGGCGCAC 29841 28 100.0 32 ............................ TGATTGTACTGAGCTGCAGGATTTGATCAGCT 29781 28 100.0 32 ............................ ATGTGCCGATGTTCAGCAAAGAATGATTTGTC 29721 28 100.0 32 ............................ GGTGTCGAATCCGGCTTACGTTGATCACCTCC 29661 28 100.0 32 ............................ AGCAGAACACCAGAAAGTGGCCGTAAACGTGC 29601 28 100.0 32 ............................ TAATGGAAGTAAAACTTATGCCGCCGCTACAT 29541 28 100.0 32 ............................ GATTACGGATGAACATTTGGCCGTTATCGATC 29481 28 100.0 32 ............................ TATTCGCGGAGATACGATCAGCATCCACACTC 29421 28 100.0 32 ............................ TTGCTTGTCTGGTCCCGGGCAATCATCCGCGC 29361 28 100.0 32 ............................ GTTGGCAAAAATCTCAACCTGATAGCCGGTAA 29301 28 100.0 32 ............................ TGACGGTTGACGAGTTCAAAGCCTGGCTTAAA 29241 28 96.4 32 .............T.............. ATCATAAAATCGCCATGCATGAACACTCCGCC 29181 28 96.4 32 .............T.............. ATGCGCTGTAAGGGATTTCCCGGTGCTCCGGC 29121 28 96.4 32 .............T.............. GATACTCTGCGCACTACCATTATTGACGCCGG 29061 28 96.4 32 .............T.............. ATCGAAATGATCAGGTCAATAGATGGATACGG 29001 28 96.4 32 .............T.............. GTCATCAGAATACGTAACCGGCCAAACCGTTA 28941 28 96.4 32 .............T.............. TTTACAGCGTAGGCGCTACCCGCCATAGGTTT 28881 28 96.4 32 .............T.............. ACAGGAAGCACTACTTTTGCTCAGCTTTCAGT 28821 28 96.4 32 .............T.............. TGTAAATGCTTTCTCAATACCTGAGTTCGCAG 28761 28 96.4 32 .............T.............. GCGAGTATTTAAAGTGGACGGGTACGGCGCTG 28701 28 96.4 32 .............T.............. AGTCTTTGCGCTTCATGGCGTTTTCCAGAGAG 28641 28 92.9 32 ...........G.T.............. AGTCTTTGCGCTTCATGGCGTTTTCCAGAGAG 28581 28 96.4 32 .............T.............. TGTTCAACCCATGCCGGACCGCTTTCCGTGGT 28521 28 96.4 32 .............T.............. ACTCCGTCTCTCGACGATCCGTTCACTCCTGA 28461 28 96.4 32 .............T.............. ACTTGATATACGCGATACCTGCGTATGGGTCT 28401 28 96.4 32 .............T.............. AAGCTGGCCGACGCTGTTGGTGTTGATTACTC 28341 28 96.4 32 .............T.............. TTCACCCCATTTATGACATATGAGCAGGACTT 28281 28 96.4 33 .............T.............. CTGACGCGCTGCGCTTACTGCCACCTGCAGTTC 28220 28 96.4 32 .............T.............. CACAGGACAAGCGGTATATGGCCCGGCCCAGC 28160 28 96.4 32 .............T.............. TTGATCGCCTTGAATGGCTGGCACTTAAAAGC 28100 28 96.4 32 .............T.............. GCTGCCGTTAAGTTTTACACCAGCGATGCCAC 28040 28 96.4 32 .............T.............. GACTACTGTTGATAGAGATCCCGGAACAGACA 27980 28 96.4 32 .............T.............. TTTCATCGACTCAAGCCACTTATTGATGTCCT 27920 28 96.4 32 .............T.............. ATGATCGTTCCGAGAGGGGCGTCTATTGCGTT 27860 28 96.4 32 .............T.............. AACAGCGGAATCAGGTCCGTCAGTGCGGCAAT 27800 28 96.4 32 .............T.............. ATCACTCGGAATATTTTCAGGATTATAAGTAA 27740 28 96.4 32 .............T.............. ACGGCGATATTGTTATTGCTGCGGTTGATGGC 27680 28 100.0 32 ............................ ATTGCGATATGCTGCACGCAACATGAATGGCA 27620 28 100.0 32 ............................ TGTAGGTTCAGGTCAATATTTGTAGCGACCGG 27560 28 96.4 32 ...........................G CTTTTAAATTACGTGTTACAGGCACGTAATGG 27500 26 89.3 0 ....................T.-.-... | ========== ====== ====== ====== ============================ ================================= ================== 54 28 97.9 32 GTTCGCTGCCGCACAGGCAGCTCAGAAA # Left flank : GCAGCCTGCTCAGCCTGATGCAGGAAGACTGGTTAAAAGGTATGCGCGACCATGTGCGCATGACCGCGATTCTCCCGGTACCAGACGATGCTGCTTACTGTGTATTCCGGCGTAAACAATTCAAAACCAGCGCCGAACGACTGCGCCGGCGGCGTATGAAGCGCAAAGGAGAAACGGCCGATCAGGCGGCCGAGGCCATTCCTGCCACCATAGAGCGTAAGCCCGATTTACCCTATGTGCATTTACGCAGCCACAGCACGGCTCAGCCGTTCTGTCTGTTTATTGCACGCGGGCCGCGACAGGAAAAACCCGGGCAGGGGGATTTTAACCGTTACGGGTTAAGCCAGCATGCAACGGTACCGTGGTTCTGACCCTTTTTCTTTGGGTTTTTAATTGGCTTTAAAAATCAAAGGGTTAACCCGTATCCCCAAAAAAAGGGGGATGCGGGCTTTCTCTGTAAAGTTCTTTAACAATCAGGGTGTTAGAAAGAATAAGCTCTT # Right flank : GCGAAGGAGTAGAACAGATACGAAAAAGCCCGCGAAGTAATTGCATACTTCGCGGGCTTTAGAATTCGTGGTAGCTATGACTGGACTTGAACCAGTGACCCCAGCATTATGAATGCTGTGCTCTAACCAGCTGAGCTACATAGCCACATTATTACCTGAAAGAAGTGGTTAATGCTTGCTGCATTGCTCCGTTCAAGTGGCGCGTATTATGCCAGCATTCTTTTGCCTGTCAAACATTTTTTTCTGATATTTTTCAAAGAGTTACTAAACCGTGCGAAAGTCCGGGCAGAGGCCCTGTGCTGCTGCAGTCAGGGATTGCTGTCGCGATTGTTGAGATGGCGCTGAATCGGGCTTTGTCTGCGTCAGAGGGCTTCTGATATGTGTTCAGGCGGTGCGGGTCTGGGATGACGTCAGGTACGAGGAGGGTAAGCATTCAGTGTATACAGCTTCGGTGCATAACAGTCCGGACATAAAAAAGCCCTGCCGTTTCCGGCAGGGCT # Questionable array : NO Score: 5.85 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGCTGCCGCACAGGCAGCTCAGAAA # Alternate repeat : GTTCGCTGCCGCATAGGCAGCTCAGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCGCTGCCGCACAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //