Array 1 46622-47130 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_ARQI01000108.1 Brachyspira innocens ATCC 29796 strain B256 F811DRAFT_scaffold00023.23_C, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence                                                          	Insertion/Deletion
==========	======	======	======	====================================	=========================================================================	==================
     46622	    36	 100.0	    73	....................................	TGATATATTCAGTGGAAAAGAAAATAAAAAACTATTGTTTTCGTCCCCTACGAGCGTAGCGAAGTACCTACTT	
     46731	    36	  77.8	    36	.G..A..AG.GTA.C.....................	TCGCTTATATCGTCTAACTAAATTTTCATTAAAAAT                                     	CAGTGT [46747]
     46809	    36	 100.0	    36	....................................	TTGTTCTATTCGCTTGTATGGGCTTACAGTTTTAGC                                     	
     46881	    36	 100.0	    36	....................................	AAGGGGGTAGTCCATGAAAAACAACAACACTATAGA                                     	
     46953	    36	 100.0	    35	....................................	TTATATCACTCGCTTTAGTTTTTCTAAAGTAAGAT                                      	
     47024	    36	 100.0	    35	....................................	TTTGATGGCACAGATAAAGAATCGGTTTTATTTAA                                      	
     47095	    36	 100.0	     0	....................................	|                                                                        	
==========	======	======	======	====================================	=========================================================================	==================
         7	    36	  96.8	    42	GTTTTCGTCCCCGGTGGGGGAATTGATTTTAAAAAC	                                                                         	       

# Left flank :   AAAGAACATATTGAAGAGATTAATATTAGCACCAAAAATATAGAAGGCGAACTTTATGTAAATATGGTATCATCAACACCGCAGATAATATCGATTTTGTCGCTTTTTGTAGGTGGTAAGGCATTGTATAATTCTATAGGTGTTTATCCAAGTAATCCTTTATATGGCGAGAGAATAAGACTTGATGATTTGGATTTTTTTAGAGAGATAATTTAATATTTTTTAATTTATAGAAATGAAAAGAGGCTTATAAGGCCTCTTTTTTTGTTTAAATAAAATTTAATCAATGAAAACTCTTGATTATTAATCTGTCCCCCACGTAGTGCCTATGGCACGAAGTGTGGGAATTGATTTTAAAAACGGATTCAAACAATATTAATAACACTACAGTAGAAAAGTTTTCGTCCCCCTACGAGCCGTTAGGCGAAGTGCCTACTTGGGGTGTGGGAATTAATTTTAAAAACTAGGAAGTGCATGTTTTGATGTAGATTATCTAATAA
# Right flank :  CTTATGG

# Questionable array : NO	 Score: 2.60
# 	Score Detail : 1:0, 2:0, 3:0, 4:0.84, 5:0, 6:0.25, 7:-0.49, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTCGTCCCCGGTGGGGGAATTGATTTTAAAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:55.56%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  F [-9.40,-8.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [12-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [71.7-6.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [0.64,0.41   Confidence: LOW] 

# Array family : NA
//