Array 1 13538-12710 **** Predicted by CRISPRDetect 2.4 *** >NZ_JUYN01000019.1 Streptococcus pasteurianus strain 651_SPAS 42_23201_685178, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 13537 36 100.0 30 .................................... GCTTGATAACGTTCTGATTGCGCTTGCTCA 13471 36 100.0 30 .................................... AACAGTAAATGATTATCTAGCTTATGTAGA 13405 36 100.0 30 .................................... GGTCTCAGGAAAATATATGTATGGAATGCA 13339 36 100.0 30 .................................... CGTTGTAAAAGTAAAGTGTGCCTTCGTTCC 13273 36 100.0 30 .................................... CTAAAAGTTGGTGGTCTGAACTTTGGTCTA 13207 36 100.0 30 .................................... TAGGGGCGTAAATCGTCACTACGAGCCCAC 13141 36 100.0 30 .................................... GACTGGTGTCAGAGGTGAAGTGGACGAACA 13075 36 100.0 30 .................................... TCTTCAAACGTCATATCAATACCATTTGGT 13009 36 100.0 30 .................................... AAATCGGAGTGTATGAAAATTACTACGATT 12943 36 100.0 30 .................................... ATGCACGATTACTATCTTTCTATCTATATT 12877 36 100.0 30 .................................... AAGCCATATGTTGAATAAGCATGCGCAACG 12811 36 100.0 30 .................................... CAATTTATCATCTAACGTTAAGAAGCTCAA 12745 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 13 36 100.0 30 GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC # Left flank : ATGGAAAAAACTTTCTTTATGATTAAACCAGATGGTGTGAGACGCGGGCTTGTTGGTGAGGTGCTTCACCGTATTGAACGACGTGGTTTTACAATTGAAAAATTGGAGATGCGCATGGCAACCCCAGAATTATTAGAAAAACATTATGCTGATTTGGTTGACCGCCCATTTTTCCCGCTAATCGTTGATTTTATGACAAGTGGTCCAGTAATTACTGGCGTTATGTCTGGAAACGAAGTCATCACTTCATGGCGTACAATGATGGGAGCGACAAATCCTAAAGAAGCTCTCCCAGGGACAATCCGCGGAGACTATGCTCAAGCACCAGACGAAAGTGGCGCAACATTTAACATCGTTCACGGTTCAGACTCACCAGAATCAGTTGAACGCGAAATCGCCCTCTGGTTTGGAGAATAAATAAAAGGAATTATTTCGAAGCTGAAGTCTAGCTGAGACAAATGGCGCGATTACGAAATTTCGTGAGAAAAATGGTCCACGAG # Right flank : TCATTCCTCCTAATTAGAGGTAGACCGTGTAGTTTTATAGCTGTGCTGTTTATTTTACCATCTTATGATGCTTTTTTCTTGAAATGACTTCTAAAACTTTTTATAGCAACGTTTCTGTTTATCTGTTATAATAGAAATAATGATTAATTGTATAGGATTGTAAGATGGATATTCAAGAATTAAAAAAACGACAAGAGAAGATTCGTAATTTCTCTATCATTGCACACATTGACCACGGGAAGTCAACTTTGGCTGACCGTATTTTGGAAAAAACTGAGACGGTTTCTAGTCGTGAAATGCAAGCTCAACTCTTGGATAGCATGGATTTGGAGCGTGAGCGTGGTATCACGATTAAGCTTAATGCGATTGAGTTGAACTACACGGCTAAAGACGGTGAAACCTACATTTTCCACTTGATTGACACCCCAGGACACGTTGACTTTTCATATGAAGTGTCACGTTCTTTGGCGGCTTGTGAGGGGGCAATTTTGGTTGTTGAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: R [matched GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [63.3-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], // Array 2 15866-14179 **** Predicted by CRISPRDetect 2.4 *** >NZ_JUYN01000019.1 Streptococcus pasteurianus strain 651_SPAS 42_23201_685178, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 15865 36 100.0 30 .................................... AAAGGTATCGGTAGCTACATTCCAAACTTT 15799 36 100.0 30 .................................... TGGGCAATATCTACGAAAATCCAGAGCTTT 15733 36 100.0 31 .................................... GAATGTTCCAACGAGCATGACACCAAGCCTG 15666 36 100.0 30 .................................... CCCATACAGTTTGATGATTGATTCTAGTGC 15600 36 100.0 30 .................................... CCGTTTGATGTGTTAGAAAGTTTCATTGAG 15534 36 100.0 30 .................................... TTGAGAAAAAACATGGTATGCACGGAACAA 15468 36 100.0 30 .................................... GACGGAATAAGTGAACCAACTTACTATGTT 15402 36 100.0 30 .................................... ACCACCATCGTCGCTTGTAGTTGTCGAACT 15336 36 100.0 30 .................................... AAGCTTTAAAGTGGGTTCTTGAAAACGAGG 15270 36 100.0 30 .................................... AACAATTGTGCCACTGCACAATAAAGACCT 15204 36 97.2 30 .................C.................. CACAACCGGATAAGTGCCAGCTGGAATTGC 15138 36 100.0 30 .................................... TATTGTAAAAGTAGTCTCTTGTAATGTTTG 15072 36 100.0 30 .................................... ACACGTTGTGGCGAATAGAATACGAACTAA 15006 36 100.0 30 .................................... TTGTTCTGTCATATTCTCACCCCCTTTCTA 14940 36 100.0 30 .................................... TATCGTAAACGAAAACATGACTGTCATTGA 14874 36 100.0 30 .................................... GTTGACTGGTGGCGAGATTACGAACGCACT 14808 36 100.0 30 .................................... GGCAGAGGGATATTAAAATGACTAATTTAT 14742 36 100.0 30 .................................... TTGAAAATCAAATTTAAAAGCTTCTGGACA 14676 36 100.0 30 .................................... CTGCAATGTCGCCGAATTTTGTAATGGCGC 14610 36 100.0 30 .................................... CTCACGGCTCGAAGAGAAATTCGACGATAA 14544 36 100.0 30 .................................... ATTGTCTGTGGAGCTTTCAGATGGTGATAT 14478 36 100.0 30 .................................... TGTCCACAAATACATACCTTTAACTAAAAC 14412 36 100.0 30 .................................... AAACATTTCTGGCGTATAGTTCAGCTCCTT 14346 36 100.0 30 .................................... GCACACAATTTCAGTTGTAGCTAATTTTGT 14280 36 100.0 30 .................................... ATTTGCTTTTACAACATTAGCGCTGTAAAC 14214 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 26 36 99.9 30 GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Left flank : ATCCAGCAATTTTTCACAAAGAAGATGATGGAAGTTTTTGGGTAGAATTTCCAGGATATAGTGGTGGTACCGAAGGTGATGACGTCGAAGAAGCGATGAAAAATGCTCGAGAAATGTTAGAAAGCTCATTGGCTGCTTATTTAGATGAAGGGTTAGAGCTTCCAAAAGTTGTTGATATGAGTGAATTATCAGTTGAAGTTGGTTTTATTACTTTAATTCAAGCAGCCCCTTCCCCATATTTAAAAAGTACCAAAGCCATTCGAAAAAATGTTACGGTTCCAGAATGGTTAGTCAGATTCGCTGATCGAGAATATGTTAATTATTCAGAATGTTTGGCACAAGTTTTAGAGAAAAAATTAAAGCTTTAAATTGCTATAAACGTTGTAAAATCAAGGTTTTTTAGGTATAATATAGTTAAAAATAATGAACTATTCGAGGCTGAAGTCTAGCTGAGACGAATGGCGCGATTACGAAATTTTGTGAGAAAAATGGTCCACGAG # Right flank : GTCTGGTATTTAGGATTGAGCAGAAATAGTATTCTCAGAAACGTACTAAATTTTAGTGAAAACGCCTTTCAACATTTTTCAAAAGTTTTCTTTTATGGTAAAATAAAAACTGAATTTATTTAGATAGGTTGGATTGTTTACATGGAAAAAACTTTCTTTATGATTAAACCAGATGGTGTGAGACGCGGGCTTGTTGGTGAGGTGCTTCACCGTATTGAACGACGTGGTTTTACAATTGAAAAATTGGAGATGCGCATGGCAACCCCAGAATTATTAGAAAAACATTATGCTGATTTGGTTGACCGCCCATTTTTCCCGCTAATCGTTGATTTTATGACAAGTGGTCCAGTAATTACTGGCGTTATGTCTGGAAACGAAGTCATCACTTCATGGCGTACAATGATGGGAGCGACAAATCCTAAAGAAGCTCTCCCAGGGACAATCCGCGGAGACTATGCTCAAGCACCAGACGAAAGTGGCGCAACATTTAACATCGTTCA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: R [matched GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.20,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [68.3-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.87 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //