Array 1 23086-17995 **** Predicted by CRISPRDetect 2.4 *** >NZ_WTVH01000009.1 Aromatoleum buckelii strain U120 NODE_9_length_116254_cov_75.0907, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 23085 29 100.0 32 ............................. GCCAAAGGGGCGCGAATGCCTGACAAATACCT 23024 29 100.0 32 ............................. GGCTCGCGTTCGCGCAATCGAGTCTGACCGCC 22963 29 96.6 32 ............................G TCGGCACCGTGACGAGCGCGACCGGCTCAGTA 22902 29 100.0 32 ............................. GAGTTAATGCGGTCGATTGTGCAGCCCTGCGG 22841 29 100.0 32 ............................. TGGAAGCGGTCGAAACGCTGATGGCCAACCCG 22780 29 100.0 32 ............................. CAGTATGAGCCGTGACGCGGACGAAGAAACCG 22719 29 100.0 32 ............................. TCGGCCGGCGCTTACAGCACATGGATGATCGA 22658 29 100.0 32 ............................. AGGCGAAGACCGGCGCCAAGCTGCGCATCGAG 22597 29 100.0 32 ............................. AAAACCAGCTACCGGCCCACTGTGCCGATGGC 22536 29 100.0 32 ............................. GGCAGTACGACCGTGGAGCAGGTGCGCTGATG 22475 29 100.0 32 ............................. TACTCGATCGGCCCGACGCCCGAGCCGTCGAT 22414 29 100.0 32 ............................. ACGATCCACGCCGCACCGACAATGGCGACGAA 22353 29 100.0 32 ............................. ACCGGCACCGCAAGGACCGCCGCCATGACGAT 22292 29 96.6 32 ............................T TTTCTTGATCATGTTGAAAACTCCGTTAGCCC 22231 29 100.0 32 ............................. GTCGCCTCGGTCACGGGCGTCAAGGACTGTGG 22170 29 100.0 32 ............................. TGCAATTTGTTCCGATTCGCTCCGACCTTGCA 22109 29 100.0 32 ............................. TCGTCGATCTCCGGGTAGCCGCCGTCGCGCCG 22048 29 100.0 32 ............................. CTACGAGCACCTGTTCGCGCAAATCTTCCTGC 21987 29 100.0 32 ............................. GACCCGAGCAGTTGCGGCAACTGCATCGACAG 21926 29 100.0 32 ............................. TAGCATCAGCAACCCTGTCATGAACCTGATCG 21865 29 100.0 32 ............................. ATCGGGGTTCTCGGATACCGCGCGCTCCTGGA 21804 29 100.0 32 ............................. TGGTCGGCGTCGATTTCGAACGACTCCTGAAC 21743 29 100.0 32 ............................. GCGACGATGGGGGAGTGCTACCGCAATCCAGG 21682 29 100.0 32 ............................. TCGGCAAAAACACCGCGAACGAATGGCTAGCG 21621 29 100.0 32 ............................. GGCAAAAGCCCTGCAAGCCGAAGTCGTCGACG 21560 29 100.0 32 ............................. CCATCACCGAACAAGCCACGCGCCACCGCGCA 21499 29 100.0 32 ............................. TGGTTGCAGAACACCGAAACCCTAGCGACCCA 21438 29 100.0 32 ............................. GGGGCTAAGCGTCGTCCGGAGTCTGTGACGAT 21377 29 100.0 32 ............................. GACGGCAGTGCGGTTCCCGGCGCGCTCGTCTC 21316 29 100.0 32 ............................. GCATGATCGAGGACTACGGCGTGTGCTACGCC 21255 29 100.0 32 ............................. CGGTTACGCTCGATCATCGTCGTGGTCACGAT 21194 29 100.0 32 ............................. CAGCGGTAACGCTCCGGCAACCCACAGACCAC 21133 29 100.0 32 ............................. CGCAGCCCCTTTGTCCGCCCCGATCCCATACG 21072 29 100.0 32 ............................. ATTTCGAGAATAGAGGGGAATACGGTGTCGAT 21011 29 100.0 32 ............................. CTCGCGGCGCTCGACTCGTGGTGTATCCAGAT 20950 29 100.0 32 ............................. GTCCCGACCGTGTTGAACAGCGCGACGACCGC 20889 29 100.0 32 ............................. GAATGCCGCGACCAGCGCATCGGCCGCAGGCA 20828 29 100.0 32 ............................. AACGCCACCGCGCTCGCCGACAAGCTGCAGAC 20767 29 100.0 32 ............................. CATCGTCTATCTCGCGGGTGAAGCAGGCATGG 20706 29 100.0 32 ............................. CTGCATGGCCGGATAGCGACTGTCTGCGGTGT 20645 29 100.0 32 ............................. GCATGATGACTTTTGCCGGGGGCGAGCCGTGC 20584 29 100.0 32 ............................. TGTCGCGGCTCGCGCAGCTTGAGAAAATGGAG 20523 29 100.0 32 ............................. TCGACGTAAGCATCGTGTGCGTCCTCCTGCTG 20462 29 100.0 32 ............................. GTCGCCGTGGTGCCGGGAGTGGTGCGCGTGCT 20401 29 100.0 32 ............................. TGATGGAACGCGCCGCGCTCGCTGCGATGCGC 20340 29 100.0 32 ............................. GCGACGCGGAAGAGGAAACCGCAAGACCTGTG 20279 29 100.0 32 ............................. GGTCCTTGACGATGATGCTTGCGACGCTGATG 20218 29 100.0 32 ............................. CCATCCGTCGTCGGTGTATTTCTCCGCGCCAT 20157 29 100.0 32 ............................. TGATGGACCGGCAAGGCATCGCCGGGGATGAC 20096 29 100.0 32 ............................. TGGCGCGGATGATCGGGCATCGGGACGTCCGA 20035 29 100.0 32 ............................. TTCCCACGACAAAAACTGACGCCCTTGAATCC 19974 29 100.0 32 ............................. TATAACCCGCTGCGCCTGGGTGCAAATTACGT 19913 29 100.0 32 ............................. TCTTGGCAAGCCGAGGCATCCGGATACTTCTC 19852 29 96.6 32 ............................T TTTACGGTCAGTGTGGCGGACGATGCGGTCGG 19791 29 100.0 32 ............................. TTACGTACCATGCAAGCAGATTTTGTTATCGT 19730 29 100.0 32 ............................. ATTCCAGACTGGCAGGAATTCACCGACGCCGA 19669 29 100.0 32 ............................. ATCATCGTGTCCGGCTTCGTCGGCCTCGTGTC 19608 29 100.0 32 ............................. TGGTGACCAGCTGGATATCTGCCGGACAGGTT 19547 29 96.6 32 ............................T CCTTGACCCGCGCGGTCCCGGTCCCGGTCAGC 19486 28 96.6 32 ....-........................ CCGTCGTCGAGCGGCGGCGATCCGAAGCCCGT 19426 29 96.6 32 ............................G TTCGGCTTCGGAGGGCAGCGGGGCGTGATACA 19365 29 100.0 32 ............................. ATTCGCGTGAATCTGCTCGCGTCGGTGCTGAT 19304 29 100.0 32 ............................. TGACCGGCGACACGGCCGGGCTGCGGGCGCTG 19243 29 100.0 32 ............................. ATGACGCTCCCGCAAGGGCAGGTCCGCGTCGT 19182 29 100.0 32 ............................. GTTAAACTGCTGCGCAACCTCATCCCAAATGA 19121 29 100.0 32 ............................. TGCACGTTTGACTCTATTGTTGGTGATGGCCG 19060 29 100.0 32 ............................. ATGCGCCAGGATTTCTGCCGCAGTCAAAGGTA 18999 29 100.0 32 ............................. TATTCAGGGGGCAGCGGGCGACCGGTTTCAGG 18938 29 100.0 32 ............................. GGATGTCGGCGGCGACCTCATCGACCTGTTCA 18877 29 100.0 32 ............................. ACCAGCAAGCCGATTGCCGTGTTCCTGTTCGG 18816 29 100.0 32 ............................. CTCGTGTCCGCGTTCCTGATCGCTGCGCGCGG 18755 29 100.0 32 ............................. AAGAACATGATGCGCTGCCTCGTCAAAGCCAT 18694 29 100.0 32 ............................. GGTGCGTCGGTATCGAAGTCGCCGAATCCTGC 18633 29 100.0 32 ............................. AAGAACATGATGCGCTGCCTCGTCAAAGCCAT 18572 29 100.0 32 ............................. GGTGCGTCGATATCGAAGTCGCCGAATCCTGC 18511 29 100.0 32 ............................. CGAATTCGGAATGCCTTGAACGAGGTGGCTGT 18450 29 100.0 32 ............................. CGCCAAGGAAGACCTCGTCGCCCTTGGCCTGT 18389 29 100.0 32 ............................. CGGGAGATGGTCTGCTGCAGCTCCGCCGACTC 18328 29 100.0 32 ............................. GGCCCGGTACAGATCGAGCTCGCCTTCCTTCC 18267 29 96.6 32 ........T.................... TGCTGTGCTCGCTGGGATTCAAGCCGGTTGTG 18206 29 96.6 32 ............................G CCACCCGCCGCCGCGGCGCCAACCTGTCCGAC 18145 29 96.6 32 ............................G TTCTCGACGACGCTGCTGGCGAGCTCGTCGAA 18084 29 96.6 31 ..........................A.. GAGCCATAGCGAAATTGTGCGACTGCTCCCC 18024 29 72.4 0 AG........TC...A..A....GA.... | T [18019] ========== ====== ====== ====== ============================= ================================ ================== 84 29 99.3 32 GATTCCCCCGCGTCCGCGGGGATAGGCCC # Left flank : CAGAAGGCGCTGGCTGGAAACCCGGACAGCATAGACCGGTTAGTGAGGCGCGAGGCTTCAACAGTATTTCGCAAGCAGTCCGTCATTCCGGCGATGATCGACAAGATCAAGCAAGTATTACGAACGGAGGAGACTAATGGGGTTGGTGATGATCGTGACTCGTGACGTCGCCGATCGATATCGCGGCTTCCTGGCGTCGGTAATGCTTGAAGTGGCACCCACCGTCTATGTGTCGCCACGCATGAACCCGAGAGTACGAACGCGAACATGGGACGTGTTGGCTGACTGGCACAGCGAAGAGCCGCGCGGAAGCATCACGATGGTATGGCGTGACGCCAACGAAACTGGCGGTATCGGAATAGAATCGTTGGGTGAGTCGCCGCGCAAACTCATAGAAGTTGACGGTACGTGGCTGGTGAAAAAGATGCTGTAAAGCGTACATTAAAAATCTGAAGCAAGTTCAACACTTTCTCTTTTGGATCAAGCTATTATCCGCTAGA # Right flank : TGGCCGTAGGTGAGCGCACTGGCTTGTGCATATCGCCCTTCAGCGACGAAAGGCCTGGATTGAAATGTTGACCGCTCGCTGATACGCCGTCTGCAAGCCGATGCCAATTCCTGCTTCGTTCGGGCGGGGGAGATAATCCGGTCCATGAAAAAGAGCCTTGCCTACCGGACCAACCATTGGCTGCCGTGCCGCTTGGTCGTGATCGTCGGCGTTGTCGCCGCAGGGATGGCTGTGGACGCGCATGCGGACTCGACGGAACGTCCTCGCATCGCCGTCGACATCGGCCACACGCTCGCAGCGTCCGGGGCTACCAGTGCGCGGGGGCGGACGGAGTTCGAGTTCAACCGCGACCTTGCGCTGCAGGTGAGTGCGGCGCTCGAACGACTGGACGTGAGAGCGGAACTCGTCAACGCCGAGGGCGCGATCGAATCCCTCGCCGCGCGCCCGGCGCAGGTGCCGGACGCGGAGTTTTTCCTGTCGATCCACCACGATTCAGTCAG # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATTCCCCCGCGTCCGCGGGGATAGGCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [17-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [40.0-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,1.05 Confidence: MEDIUM] # Array family : NA //