Array 1 169980-171144 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CABHXD010000025.1 Yersinia frederiksenii isolate IP38831, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence             	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	============================	================================	==================
    169980	    28	 100.0	    32	............................	AAGATTGATCGTTTTAACCGATCAATAAACAA	
    170040	    28	 100.0	    32	............................	TTAGCCGCTCTGCCGGCTAACACAAACAAAGA	
    170100	    28	 100.0	    32	............................	TTTGCATCCTGTTTGATAAAGATTTATCTCAA	
    170160	    28	 100.0	    32	............................	TAACTGGCGCACCCGGTTACGAAGCGCATTCT	
    170220	    28	 100.0	    32	............................	CGCTTGCGGTGACTTCACCTCGCCGGGGAATG	
    170280	    28	 100.0	    32	............................	AGGCTCATGGCGTCATCACCTTCTTGCGGGAG	
    170340	    28	 100.0	    32	............................	AGATAGCGATCAGTAATGCGCTGACGCAGGGT	
    170400	    28	 100.0	    32	............................	AGGTGCAAAGTAAGTCAAACCGCAGCTATCAA	
    170460	    28	 100.0	    32	............................	GCAGCCTTAACGTGATTAACTACAGACTCCAT	
    170520	    28	 100.0	    32	............................	CATAACCACTGGGGCCGCTGGTAAAACTTCAC	
    170580	    28	 100.0	    32	............................	AAACGAAGTACAGTCCACCTCGATTAATATGA	
    170640	    28	 100.0	    32	............................	TTGCCAAAAGATCGGTTTAGCCGGCAATTCAT	
    170700	    28	 100.0	    32	............................	CTCATCATTAGAGAAGTCAGCAAGACGAGCCA	
    170760	    28	 100.0	    32	............................	GGCAATGTTGCGAATGCTAATCCGCGCATCAC	
    170820	    28	 100.0	    32	............................	TGCGTTATATATAGCCTCTGCCACATCAACAG	
    170880	    28	 100.0	    32	............................	AGCGCGGCCAGTGCAGCAATAATCAAGGTGAT	
    170940	    28	 100.0	    32	............................	TGGGCGAACTGACGCTGGAGAGTGCCAATGGA	
    171000	    28	 100.0	    32	............................	AAACAGGCGCTATTGCCATTTTCAACGGTTCT	
    171060	    28	 100.0	    30	............................	AAAGACCTGGCTTGTTGATATAGAGGGATG  	
    171118	    27	  78.6	     0	...............A....-GG...GC	|                               	
==========	======	======	======	============================	================================	==================
        20	    28	  98.9	    32	GTTTGCTGCCGTACAGGCAGCTTAGAAA	                                	       

# Left flank :   CGCAAGACATCGCTAATCTGATGCAGCAAAACTGGTTACAAGGTCTGCGTGACTACGTTCGATGCAGTGCGGTATTGCCAGTACCTAAGGCAGTACAATACCGAACGGTGAGGCGAGTACAGGCAAAAAGCGCCCATAACAAGCGGCAGAGATCGATTGCTAAAGGGTGGCTAACTGAACAGCAGGCATTTGAACAAATTCCTGACACCCAACAGAAATCTCTTAGGTTGCCTTTTATTCAACTGCGTAGCCTTTCGAACGGCAATACGATGCGAATTTATATTCAGCATGGTGAATTGCGGGAACAAGCTCAGTTGGGAAGTTTTTCTGCCTACGGTTTAAGTAGCAGTACCACCATACCCTGGTTTTAACCCTTTTTTTTCGACTATTGCTAAGTCATTGTTTTATCATGGTGTAATTAAAGTGGGAGAAAAAAGGGTTTTCCTGTCACTATCCTGCTTTATGTTTAATAAACAGGGTGATGGCATATTTTTATTAAG
# Right flank :  CAAGAAGTTATTCTCCACAACAACTAACTCCGACGTGCATATCAGACCCGAAAGCGTATTTTCCTTGTACTTTCCATAACTTACAACCACTCTTAGCGGACGTGCCTTTACCCGCCGGGGATTTTTTCCCAACGTGCGTTTTTGGCCTGAAAGCGCTAGACGAAAATCAATTGGAATGTGAGTTGGCCGGGAGCTTATACAGCTAATCGATATTGAGTTTAACTATAAATATATAAATCAATAGAACTTTCAGCCCCAATACTACCTAAGAACCGATTCGTTTCTGCTGACCAATAGATAGATGGTTTTTCCCCATTCTCTACTTCGATTAAAAGAGAAAAAATGAACGTAACACCATATTTCTCTTTTATTTCTTCCAATACATTAATTTTACATTTTAATAGCGACAATAACTTTCTTGTTTGCTCATCTACATCATAGGACTCTTCCTTCTCCGTACAGATTGACCAACTAGTCTCTGTACTCGGTCTTTTTCTCGT

# Questionable array : NO	 Score: 6.21
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTGCTGCCGTACAGGCAGCTTAGAAA
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [7,7] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GTTCCCTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-8.00,-7.70] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-6] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [68.3-58.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.55,0   Confidence: HIGH] 

# Array family : I-F [Matched known repeat from this family],   
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