Array 1 245571-246331 **** Predicted by CRISPRDetect 2.4 *** >NZ_WTMX01000003.1 Escherichia coli strain 10432wG6 NODE_3_length_302562_cov_51.3559, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 245571 29 100.0 32 ............................. GGATTTTCTTTGGTGGGGAATGCCCGCCGTGT 245632 29 100.0 32 ............................. CTATTGCTTTCGTACAGATTTTCAGTGGTGCT 245693 29 100.0 32 ............................. AAAATTCTGTGTTTCGACCATTACTTCGGTAA 245754 29 100.0 32 ............................. ATTCTTGATCACGCTTTTACCGAAGTAATGGT 245815 29 100.0 32 ............................. GGGGTAGAATTATTCTTCGTGAGCGATTTATC 245876 29 100.0 32 ............................. CGGCGTTCCGTGCGGCAATTGGAATCACACCA 245937 29 100.0 32 ............................. ATTTGGGGGTATGAGAGCGCCGAGCCGTTCGG 245998 29 100.0 32 ............................. GCTCCCTGTCAGTTGTAATCGATAACGTTGAT 246059 29 100.0 32 ............................. ATGTAGGGGCAATCGAACGATTCTCTGCCGAC 246120 29 100.0 32 ............................. CCGAGCCCGATTATCGGCATGAGCGATGCGGA 246181 29 100.0 32 ............................. TATTACGCGCCAGCAATGCTGACAGCGGCAAA 246242 29 100.0 32 ............................. CGCGAGAGCCAGCAAAACGCCAGGGCACAAAA 246303 29 93.1 0 .A..........................A | ========== ====== ====== ====== ============================= ================================ ================== 13 29 99.5 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : TGGATGAACTATTGGCAACGCTGACCGATGATAAACCGCGAGTCATTGCACTGCAGCCGATTAGCCAAAAGGATGATGCCACACGTTTGTGCATTGAAACCTGCATTGCGCGTAATTGGCGTTTGTCGATGCAAACACATAAATATCTAAATATTGCCTGATTAAACATTTATAAGCGTTATAAATGGGTGGAACCTGTAAAGACTTCTACTCATTTATATTGTTTGTCGCCTCTGAAAACTCCTCCATTTTACCCATCCAGGGCTAATCATTAGCATTCTCTACAAATTCTGTGGCATTAATTTTTCGCTGGAGTGAAAATTATTGCGGTAAAGTTTGGTAGATTTTAGTTTGTATAGAGTTATTTTAAATATTTACCTTTTTAATCAATGGATTAAGTACTCTTTAACATAATGGATGTGTTGTTTGTGTGATACTATAAAGTTGGTAGATTGTGACTGGCTTAAAAAATCATTAATTAATAATAGGTTATGTTTAGA # Right flank : ACCATATAACCCGTTATCTCTTTCTCAAGTTTTTATATTAGCAGTACTTGTAATAAGCAACATATCCACGTAACCCCTCATGTTCAAAATAGTTCTCCATGCCAGAGAAGTTCACAATTATCGATACAAAAAATTAAATTTAATCAAAGTGTTATTTGTATGATTCTTAAATCGTTAAGAAATTTTAATCTATTATTTTTTTAATGTTGAATTAATATCTATTAATTTTTTCTTTAGGTTAATAGTTTGTTTTTTAAGCTTGTTATTCATTGATTAAGTAATAAATCTGAAAATTTGTCTTTGTTTTGAGGCTAATGAGTGGTTTTACATTACCGTTTCTATACGCTGTTGATGAATAGTTCTTATGAATAAAGATATCCAGTTCATACTTTAAGTGAAAATTGATAAAGTGCGATTCGTATTGTCTTTTATTCTAAAGACATCGAGTGTAGTTAATATTCCTTGTAAAAACAGGGATAAACCGAACTAGTTAAAGTTTT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 261833-263080 **** Predicted by CRISPRDetect 2.4 *** >NZ_WTMX01000003.1 Escherichia coli strain 10432wG6 NODE_3_length_302562_cov_51.3559, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 261833 29 100.0 32 ............................. CCCCTTGACCTTAACGCCGCGTTTAGCGTCAC 261894 29 100.0 32 ............................. GGTATTTTCAGCAGATTAACCACCGCGATCGC 261955 29 100.0 32 ............................. ATTACATCCGGCAATATCATGCTGATGCCTCG 262016 29 100.0 32 ............................. GGCGGGCCGTTGGCTAAACGCTGCGATCTGCC 262077 29 100.0 32 ............................. GGACGCCCAGGAAAAGGACATTGCAGCGTCAT 262138 29 100.0 32 ............................. AAGGTCGTAAACATTGAAGACGCGATCGCGCG 262199 29 100.0 32 ............................. TAACAGGAATGTTTACGCTGGCTGAGGCTGAG 262260 29 100.0 32 ............................. CCGCCGTCGAGTGTAATACCCTGATCCATCGC 262321 29 100.0 32 ............................. CAGGATTGAAATACAGCCTCGGCCTGGGACAG 262382 29 100.0 32 ............................. AGGCGAGGGAGATCAGAGATCAGGCTATTACA 262443 29 100.0 32 ............................. AGATCGGCGGCCAGTGGATAACCGTTATCCCC 262504 29 100.0 32 ............................. GTGTGGTAATTGGTGGTCTGGCTGGTGGTTTA 262565 29 100.0 32 ............................. AGAATCTGGACACTGCATATACCGCAATCCGT 262626 29 100.0 32 ............................. CCAGCCGTTCAGTATTGCCGGTGTCAGCAAAA 262687 29 100.0 32 ............................. GAAAAGCTACTTTTGTGTTCAACTGATGCATT 262748 29 100.0 31 ............................. CCGCGCAAATCCAGCGAGCCGCCGACGCTCA 262808 29 100.0 32 ............................. TTGCAAACCGTGGCAAACGCAATTAACAAAAA 262869 29 100.0 32 ............................. ATTGTTATAATTATTTATTGAAATATCATTCC 262930 29 100.0 32 ............................. AATCTATTGTGAATTTGAAATGGTCCAGCACT 262991 29 100.0 32 ............................. GGTAAAAACACGGTCTGAACCGACATTCATGT 263052 29 93.1 0 ...........AT................ | ========== ====== ====== ====== ============================= ================================ ================== 21 29 99.7 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTTGCCGCTGGTGAAATTGAACCACCACAACCCGCGCCGGATATGTTACCGCCTGCCATCCCTGAACCTGAAACGTTAGGCGATAGCGGTCATCGAGGACGCGGCGGATGAGTATGATCGTAGTTGTAACGGAAAATGTTCCTCCACGTTTACGTGGACGGCTCGCTATCTGGCTACTGGAAGTGCGTGCCGGTGTGTATGTCGGAGATACATCCAAACGTATTCGGGAGATGATCTGGCAGCAAATCTCTCAACTGGCAGGTTGCGGAAATGTAGTGATGGCTTGGGCGACCAATACCGAGTCAGGTTTTGAATTTCAGACCTGGGGTGAAAATAGACGTATTCCGGTGGATTTGGATGGGTTGCGTTTGGTTTCTTTTCTTCCTGTTGATAATCAATAAGTTATCCGTTCTTTAAAAATAAGGAAATGTTTTAATTTAGTTGGTAGATTGTTGATGCGGAATAAATTTGTTTAAAAACAGTTATGTATGCTTAGT # Right flank : GGGCGCACTGGATGCGATGATGGATATCACTTAGAATTCCCCGCCCCTGCGGTAGAACTCCCAGCTCCCATTTTCAAACCCATCAAGACGCCTTCGCCAGCTCCTTCACCAACGGTAGCATTATCCGCATAACGTCACGGCAGCGACGTTCTATTCTTCCAGGAAGTGCCTTATCAATATGCTGTTGATTATCCAGTCTTACGTCATGCCAGCTATTTCCCGCAGGGAATGCGGCTGTTTTTGCGCGTTGCTGATAACCATCCTTATTCCCAAGATTCCAGTTAGTCGCTTCCACCGAAAGTACAGCAATGCCCGCTTTGTCGAATATTTCTGCGTCATTACAACACCCAGTGCCTTTCGGATAATTTTTATTCAAACCCGGATTGGTCGTTGCGGCTATTCCGTGACTGCGCGCAATTGCCAGCGCCCTGTCGCGCGTTAATTTCCTTACTGCTTCAGGGGTTTTTACACCGCTGTTGAAATACAATTTATCGCCAACA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //