Array 1 187873-186583 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADNOZ010000002.1 Lacticaseibacillus rhamnosus strain 1001216B_150713_B1 NODE_2_length_299061_cov_25.7765, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 187872 36 100.0 30 .................................... TTGAAGGGCAATACTGCCGATGTTGCTCAA 187806 36 100.0 30 .................................... TTGTTTCGAGTGAGCCAACCTTTGAGACAC 187740 36 100.0 30 .................................... TGGTGTCCTAGTCTATGCTGCATTCTCAGT 187674 36 100.0 30 .................................... AATACGATGGCATCATCTTGGACCGTGACG 187608 36 100.0 30 .................................... GCAAATGACGGAGCGTCCAACTGCTAATGC 187542 36 100.0 30 .................................... ACAAAAACGTCCCCGGTGGCAATGGCTATG 187476 36 100.0 30 .................................... CTCCGCTTCTGTCCCAAAGCCAAACGTCTA 187410 36 100.0 30 .................................... TGTTGCAAGCCGTTAATGTTCAGCCTGCCA 187344 36 100.0 30 .................................... TTGGACTAATCCAGATGCATGGTGGAATCA 187278 36 100.0 30 .................................... GCCAGATTTTGCCTATGAAAGTCATGATTT 187212 36 100.0 30 .................................... TGGCAATCAGGCTCGGATATAGCGTCATCA 187146 36 100.0 30 .................................... ACTGTAATACTATTGAATGCCTGTTTTGTC 187080 36 100.0 30 .................................... GCGCCATGCCATCAAACGCACCCGCGGTTT 187014 36 100.0 30 .................................... CTATGGCATTACCATGTACTGCGGGCGGCA 186948 36 100.0 30 .................................... CTGTGTTGTATGCGGCTAGGCGTGATCCTA 186882 36 100.0 30 .................................... CGCATCAGTCGAATGATTGTTGACGAGAAC 186816 36 100.0 30 .................................... ATGACCGGTTCGTTTTTGGGCGATCTTTCG 186750 36 100.0 30 .................................... ATTTGAGGTCGTTGACTGTAGGACAATTGG 186684 36 100.0 30 .................................... GCTTTGCGAGGGAAAGGCAATGACCGTGTC 186618 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 20 36 100.0 30 GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAAC # Left flank : GAGCTGGATTTGGACAAGTTATTTCAACGCTTGCTCATCAAGAAGGTAAGCCAATTGATAGATGATCAGCGGCTGATTGAGTTGATTGAGCAGTCACAACGACTGGCAATGAGCTTATTGAGAGAGCCGTTGTTAAGTGAACTTCCAGTCACAGTCGAACCTGGTGGAAAACTTGAACAAATCATGAAATACTGTAATGTTCATTTTGATGAGGAAGTACTCACGGAGCCTTTCTCGAAAGTTGAAGCGGCAATTCAGACTTTGGCGAAACTTGAGGAGAAACGTCTTGTCATTTTTGCCAACATCAGTCATTATTTAGATATTGGCAGTCTGAGTAAGCTGTTAGATCAGGTTAAGGACACATCGTTGGAATTACTTCTCATTGAATTTTCAGATGTCGAACGTAGAAAGTTTTTTGAGAAGTGCCAGTATATCTATATTGACAAAGATTTTATGGATAGCCGAGAACTGATTGATTAAGAGACTGTGTGAAAACACCG # Right flank : TTCACTCTCTTCCATGTTCTAAAGTGTAGAGTCTCAGGCAAATATCAGATCAAAAAACACCTTCAGTGAAGACGCTCCTCATAAATGCTATGCAAATACAAAAAGAAGGTAACATCGATGTCAAAAGCGAAACTAATCCTTTCCCCAGCCTTTTACACTGATCTCAAAGAAATCCGTCACATGTACCAACAGGCGTTCAAATCACTTTACGGCAAATATCAAGATCGGGAAACCAATCCCTACTGTGAATCGTTGGAAAGCTTACAGAAAAAGTTCAAACGGCCTAACAATGCCTTCTTCTTTATAATCGTTAAAGATAAACACATAGGCCTGATTCGCGTTGTAACAGATCGCAAAAATTCGGCAGCCCGTATTTCACCATTTTTAATCTTGCCGTCTTATCAAGGAAAGGGATACGCTCAGCTCGGACTACAGTTGATTGAAGAACAGTTTCCGCTCATTCAAACATGGTATGTAGACACGATTGCGGAAGAACCCAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: R [matched GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [63.3-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //