Array 1 117029-120831 **** Predicted by CRISPRDetect 2.4 *** >NZ_LQOX01000131.1 Mycobacterium gastri strain DSM 43505 contig_78, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ====================================== ================== 117029 36 100.0 37 .................................... CACAGAGGCGGCGTTCGTCATTCCAAACCCCTCGCGG 117102 36 100.0 37 .................................... AGGACTCGCACATGGGTTCGTTGTTGCCGACGTTGTC 117175 36 100.0 37 .................................... CCCCCAGACTCGGTGCCGATCTGCCGAATCAACGCAG 117248 36 100.0 35 .................................... CTGCGGGAGGACGAGAAGGACGCCGCGGAGATTCA 117319 36 100.0 37 .................................... GACTATTGGTGAGTGGAACTAAGGCATTCGCGAAATC 117392 36 100.0 37 .................................... GTTCAACCAGTCTGCCATCAGCCGGTCGACGGTGAAC 117465 36 100.0 35 .................................... GTGATAGCGGGAGTTCAGCCAGTGGGTGCGGTTGT 117536 36 100.0 37 .................................... ACCATTCGCGTGTGGTGTCAGGTGCTGGTCGCGGCGC 117609 36 100.0 36 .................................... ATCCGAGGCGGCAAGTACGAATTGGGTGGCGGGCAG 117681 36 100.0 37 .................................... TCGCGAGGGTCTCGCGAGGGTTTCGGTAACTGTCGCG 117754 36 100.0 35 .................................... GAATACTTCGCATGGTTAGAGCGGGTGAACACCAC 117825 36 100.0 37 .................................... TGGCGCTGCGACAAAGTCTATGGCGGTGTGGTGCCGG 117898 36 100.0 36 .................................... GGCATCATCGTTCGATTCGGTTGTACTCGATGAATC 117970 36 100.0 36 .................................... CATCGAGTCGACGGCGGTGTTGACGACGGTTTTGCC 118042 36 100.0 37 .................................... GTTGATACCGGATTGGATGCGGATCGCGCATTCGCTG 118115 36 100.0 34 .................................... ACCCTGTGGGTTGAGCAGCGGGGCCAGTAGGCCG 118185 36 100.0 37 .................................... GGCTATTTGTATCGCGAGGGATTGCCCGTGCATCCTG 118258 36 100.0 35 .................................... GTGGTAAGTTCGGCGGCTAACACGTTCAAAGTGGC 118329 36 100.0 36 .................................... CCATGCCTGTGTCAGCCCAGATCGCGGCACGTGATG 118401 36 100.0 35 .................................... TCAGGCCCTTGCGCTGGATGCGGGAGACGCTGTTG 118472 36 100.0 36 .................................... CCCATGCCTGTGTCAGCCCAGATCGCGGCACGTGAT 118544 36 100.0 36 .................................... GTTTGGTCGCCAGTCAGTTGGCAGTCGGGTTCCGTG 118616 36 100.0 35 .................................... TCAGGATACAGGAAGAACTTGACGCGGCGAGCGCC 118687 36 100.0 37 .................................... CGTAAGAGTGCGCTGCCAATAGTCCAGCGTAAACAAC 118760 36 100.0 37 .................................... AGGTTTAGGTGCAGCCGTTCTTGAGTACCATGTCGAC 118833 36 100.0 36 .................................... TATGAGTGGGTGGAGAATCTGCCGAGCGCAGAAGGG 118905 36 100.0 37 .................................... CAGAACACCGCGAGCTAGCTTCTCGATTCGACTCCGC 118978 36 100.0 36 .................................... AGCTGCGCGGACCGAATGGGCAGGGATGGCCGCAAC 119050 36 100.0 37 .................................... GCTATACAACGGAACGTTAAGGAGCGCGGGTGTGCTC 119123 36 100.0 36 .................................... AACTCGGCCATCGCGGCGTCATATGTCTTTGGGCCT 119195 36 100.0 37 .................................... CAGCAGATCACCGGGCGAGCATTGGGGACTGTGACAG 119268 36 100.0 38 .................................... CCGGTAATCACCCATCCGCACGCTGTGCAGATTCGGGT 119342 36 100.0 35 .................................... GTAATGTATTTCGGTTTGCTAAAGTTGTATTTCGG 119413 36 100.0 36 .................................... ATAGACGTTTCCGCCGCGGGAGTGAATATGCAGGTT 119485 36 100.0 36 .................................... ACAATAGGTCTGATTCATACGAGAATAGACGGTATG 119557 36 100.0 37 .................................... TTCTCTCGGATAGCGCGACTGGACTACAACAGCGACG 119630 36 100.0 36 .................................... GTAATCGGGTTCCGTGTGGGTTGGCCGGAGCGGCTT 119702 36 100.0 36 .................................... ACCATCGCTCACCTACGCCCAATTACCGCTTCGGTC 119774 36 100.0 37 .................................... GGGTTGCCCGAAAAAGAGTACGCGCAATTAGCACGAG 119847 36 100.0 37 .................................... AGGTTCGGCCGAACATCGGGCTCCGGCGGGCGCAGCC 119920 36 100.0 37 .................................... GTGGCTTCTGGGCGATAAGCGGTCATGAGAACAGATC 119993 36 100.0 36 .................................... ACAAACCCGGATTGAGCGACCGTGGTGTTTTCCCCG 120065 36 100.0 37 .................................... GGTGGCGGCACACCAACAGCACCATACGTCGTGGCAC 120138 36 100.0 36 .................................... AATCCGACCACTAGCACCAACTTTTCCGCCACGAAG 120210 36 100.0 37 .................................... AACGGCATTAGGGTGTGCTGATAGTAGTGCTCCGCAG 120283 36 100.0 38 .................................... TGGCGAATCTGGCGTGCCCAGATCCCCAGGTTTTTCGC 120357 36 100.0 37 .................................... TCGATCGCGCAGCGGCGTATCTCAGTGTTTGGTTCGT 120430 36 100.0 37 .................................... CGCTTAGCTCACGATCTGCGCGAGGATCTAGTTACCC 120503 36 100.0 38 .................................... TGGTGCGGCCTCAATACTGAGGCGGAGGCTTTATCCGC 120577 36 100.0 37 .................................... TGGACTCTTCGGCGCGCACACCGGATATGTATCGCTC 120650 36 100.0 37 .................................... AATGTAAGCCGCCTCAGCGCCAATACGACGTATCTGC 120723 36 94.4 37 ..........................TT........ GCGAGCAACCGATGCGTACATCACCATGATAAACCCG 120796 36 77.8 0 .....C.G...T...G..A........A..C..C.. | ========== ====== ====== ====== ==================================== ====================================== ================== 53 36 99.5 36 GTTATTCCGGTCATTTTGGCCGGACACCATTGAGGC # Left flank : GCTTGTCGGTGAGCTTCCTGAGTATGTGCCCATGGTGACGAGATGACACGGCGTCGCTACTTGATGGCATATGACATCGCCGATCCTAAGCGGCTACGCCGTGTGTGCACACTGATGGAGGACCACGGTGAGCGACTGCAATATTCGGTGTTCCTGTGCGACCTCAGTGTCGCCGAATTAGCGGAACTCGAAGCAGCCGTTACTGCGGCGATGCATTTGGTTGAGGATAATGTCGTCCGGATCGATCTCGGTCCAACATACGCAGCCGCGGCGATACGCCAGATCGGCCGTGGCCGCTGCATCCCCGCAGACGGGCCGCAGATCGTATGAACTGCGAGGGGTCATATGACAGGTGGGATCCTTGGAGGCGCTCGTTCGCAGGTAGGAGGCGTTACGGTGAACGCTACACATCATTGGCAAGCGGATAGCAGCTCCTTGAAACTTGACTGCTCGCGGTGCCGTGTATCATGCCAGGTCAAGGGGCTCAGATTAACCGAGCC # Right flank : CATGACGCGCCGACGCTGGCAACGCCGGTGCATGACGACGATGCGCTAGCCGAGGTTGCCGCCCGGGTCCGCGACGCGGTTGGCTGACGGGCCGACGGGTAGCAGCAGCCGGGAATTGCCGAAATGGACCGAATGCGTCACCGGTTTGGTTTGCTGGCCGGTCAGCGTCGGTTCTCCGGTGCCGAGGTTGGGTGCGTAACGGGGAAACCAGCTGCCGGCGATCAGGACGCGGATGCGCGAGCCCGCTTTGAATCGGTGGGCGACGGCGTCGAGTTCGATGCGGACCGTCTCCGGCGCGTCCCCGAGCCGACGGTAGCCGTCGCTGACATTGCGGGATCGGCCCTTGGCGTCGACCTCACTGACCCGGACGAACACGTCGACGTTCGGGTTGTCCGAGGAGTGCGTCAACTCGACGACCGGGTTGCCGTATATATACACATCGTCGGCCAGGGTGGCGCCGGTGAAGCAGAGCACATCGTCGCGGCGCGCGAGTCGGCTGT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTATTCCGGTCATTTTGGCCGGACACCATTGAGGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,11] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-11.70,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [41.7-31.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0.37 Confidence: MEDIUM] # Array family : NA //