Array 1 10613-10856 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABJTU010000204.1 Corallococcus exiguus strain AB039A NODE_204_length_18044_cov_37.4943, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ============================================= ================== 10613 28 100.0 42 ............................ AAGCCCGTGGCCCAGTGGGCCCCGCTCCACCCGGGCAGCGAG 10683 28 100.0 45 ............................ GAACGTCATGCCCTGGGTGGGCCCCTGCCCCCTCCTGGCAGCGGA 10756 28 96.4 45 ................C........... GAACCCCACGCCCAGGGAGGGTCTCCGTCCCGGCTGATGCGCGGA 10829 28 85.7 0 ..T.............C....G....G. | ========== ====== ====== ====== ============================ ============================================= ================== 4 28 95.5 44 AACCTGTCCGACTGTCGGACAAGTTTTG # Left flank : GCGTGGGAAGCTCCTACGCGGATCGCGAGAACACGCTGGACGTGCCGGGCTTCACGCTGGCGGACGCGAGCGTGCACTTCGAGCGCGGCCCGTGGCGCGCGGCCGTCAACGCCTCCAACCTGGGCGACAAGACCTACGTGTCCTCGTGCAGCTCCGCGACGGCCTGCTTCTACGGCGAGCGCCGCCGCGCGTCCGCCACGGTCGGCTACACCTGGTAGCCATCACGCAGGCCTGAAGGGGCCTTCCGGAAGCCTCACCGCCGGAAGGGCCTGAAGCCATCACACACACCGCGAAATCCCTGGGGCCTTCGCCTGGCACGTCTCCGCCAGCGAGGGCCTCAGTCGTTCCCGGGCGCCGCGCCTCGAGACGCCGGAAGCCCCACGGTCACGCGTTGACGGGACTTCTCCCCCAGCGCCAGGCCCGCAGAACGAAGGTTGTCCCCCTGGGTGAGAAGGTAAGAACCCCGCCGGAGCGCCCCGTCGTCGGTGGCGCACCGAAAA # Right flank : GCGGACCGCGTCGGGCAGGGGGCGGACTGCATGGGAGTCCGGGGCCCAGCGCGTCTCGCGCGAATGTCAGCCCCTGTGATTACGCTTTGACGAGAGGCCCTTCGGGCGCGGCGCCACCGGACACGGGCTCCGCCGTCTTGCACCTGCGCAGCCCCCACGCGAGCCCACCACAACCCAGCGCCATCGCGGCCAGGAACGCCTCCGCCATGAACACCGGAGGCAGACCGCGCGACAGCGCCGTGAACAGGTTCGCGTCCTGCGTCACCACATCGCCCACCACCACCGCGCCGAACAGCACCGCAGCCGCGGCGCTCAGCACGCTGCCCACCCGACGCGACGACCCTCGCGGCACGAGCGCGATGACGCCCCCTAGCGCCCACGCGCCCAGGAACAGGCCGAACTCCCAGTCGCCTCGCCGATCCAGGGCCCACGGCAGCACGCGGTTCGCGGCGAAGTACACCGCTGAGCCGAACGCGAGCCCCGCGGACACACCCACTGTC # Questionable array : NO Score: 2.64 # Score Detail : 1:0, 2:0, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AACCTGTCCGACTGTCGGACAAGTTTTG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-8.20,-7.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [31.7-20.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0.37 Confidence: MEDIUM] # Array family : NA // Array 1 28035-28358 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABJTU010000003.1 Corallococcus exiguus strain AB039A NODE_3_length_105963_cov_35.9376, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ============================================ ================== 28035 31 93.5 44 .........................C.C... GCCCAGTCGGCCGGGAGGGGCTCCCCCTTCAGCCGAACCACGGA 28110 31 96.8 41 ..........................C.... ACCTCAGCCGGGACGGGCGCCTCCCTCAGTCGAGCCAGAGG 28182 31 100.0 41 ............................... ACCTCGGCCGGGAGGGGCTCCCCCTTCAGTCGAGCCAGAGA 28254 31 100.0 44 ............................... ACTCGGTCGGTCGGGACGAGCCCTCTCCTCAGCCGGGCCGCGAA 28329 30 90.3 0 ...C........................-.C | ========== ====== ====== ====== =============================== ============================================ ================== 5 31 96.1 43 AACTTGTCCGACAGTCGGACAGGTTTGGAGA # Left flank : GCTTCGATCTGGTGCTCGTGGGCAGCGCTCACGTGAAGAGGCCCGGAGAAAGCGCCGCTGCATCCGCGCCCGAAGAGGGCATGACGATGCTGGCGGTGACCACGGCCGCGAAGGCGGAAGCGAGGGGCTTGAGGCCGCTGTGCCACCTGCGGATGTCCGAAGCTGCGGGCTCCGGTTCAGGGGCGGGCGTCACGTTGCCGCCCCACTCCGCCCACGAAGCGCGGGAGGTGCTGAGCGCGGTGCGGGCCGCCGCCGAAGGACAGGCCCTCACGCTGCGCTTCCATCCGGATGCCGCGACCGGAACCCAGCTGGTGCTCCAGCTTCATCCTGACCTCGGAGCCCAGACTGGAGCACCGGAGGAACAAGCGGTGGCGGCAGGACCTCTGTCCGCGGAGCGCCGCGTTATGGACAACGCCGCCAGGTCCTCGGGCATCTCCTCTGTCTCCAGTGCTGAGAATCGAGACCTCGGCGGGACCGCCCTGTCGGCGGCGAACCACGGA # Right flank : CCGCTCCGGTCCGGAGGCGGGTACCTTGGATGTCCGTGGGACTGGCGCTCCGTTTGCATCAGGAGCCATCGCACCGGTCGCGGCATCCGCCACTTCCATCCCGGAGGCGTCCGACGGCTTCGACCACTCGGCGCCCATCCGCTACCACGCGCCGGTGCTCGTCGAGCGTCCGGCACTGACGACTGGAGCGTCGCAGCTGCGTGGTCGGCGGGTGCTGTTCATCGCTCAAGGCGAGGCCGTGGCCCGTGAGCTTTCGGCCCAGGCACACGACATCTGCGGCCCTGAGTTCCGCATCCTCCGCTTGGGCTCCTCCGATGCGGGAACGCGGATCCACGGCATCGACCTGACACGGGAGGAGACCGCGGAGGCGGGCCTGGATGCGCTCGGCTTCGAGCCACAGGTCATCATCTCGGTGTGCCGGATGTCCTCCGCGGAGAGCGAGTCCTCCGTCGTCGCGGACACGGCCCTGCGCCATGAGGCGCTGGAGTTGCTCTTCCTGT # Questionable array : NO Score: 2.58 # Score Detail : 1:0, 2:0, 3:0, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AACTTGTCCGACAGTCGGACAGGTTTGGAGA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-8.20,-7.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [3-3] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [31.7-33.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.74,0 Confidence: HIGH] # Array family : NA // Array 1 43723-44026 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABJTU010000013.1 Corallococcus exiguus strain AB039A NODE_13_length_73203_cov_34.4161, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =========================== =========================================== ================== 43723 27 100.0 41 ........................... GGGACCTTGGCGGGGCTCCCGCGCTGCCCCGGGCAGCTGGA 43791 27 96.3 42 .........G................. GGCGGACCTCAGCCGGAAGATCCAGTTCCATCCCGACGGCAG 43860 27 85.2 43 G.G.C....G................. GGGGAACCATGACCGGACCCTCGGCGCTGGCTCCTGGACGCGG 43930 27 100.0 43 ........................... AGGGACCTTGGCGGGGCTCCCGGGCTTCGGCCCCAGACCGCGG 44000 27 92.6 0 ....T.....................T | ========== ====== ====== ====== =========================== =========================================== ================== 5 27 94.8 42 AAACGTGTCCGACAGTCGGACAGGTTG # Left flank : GTCGGCCCTGCCGAGGCCGGATGCGTTGTTCGCGCTGGGACTGGATGGGCCCTGGTACGCGTCGGTGCATTCGGCCTCCGCGAAGCTGGCCCCGGAAGGGGGCGCGATGGTGCACGTGGCGAAGTACCTGGGCGGCGCGGACACGGAGGTGAGCGAGGCGGCGCTGGAGGCTGTGATGGACGCGCTCCAGCCAGGATGGCGCGCGAAGGTGGTGGCGCGGCGCTATCGGCCCTCGCTCACCGTCAGCGCCGGGCTGCCCCGGGCCGTGAACGGCGGGCTGACCGGGCGTCCCTCCGTGGAGGTGCCGCACGTGGGCGGACTGTTCCGCGTGGGCGACTGGGTGGGCGCGGAGGGAATGCTCGCGGATGCATCCCTGGCGAGCGCCGAGGCCGTGGAGCATGCCCTGGTGCGACGCACCGCGACGTCCCAGCGCCGCGCGGCGGGAACTTGAGGCGGATGGGCGCACAGGCCAGGAGCCCCTCCCCGGCGGCGCCGCGCAA # Right flank : TTGCCCGGTCCGGGCCCGGAGGGGCTCGGCGTGGAGATTCGGGAGCTTGGGGTACCAGGCATCGCGGCGTTCCGGTGATGCTCTTGGATTGTTGGAACGTGAGGGCTTGAACGGGATGGATTCACAGGCGCGAGGAGCACTGGGACAGGCCGCACGCGAGCACGAGCGCTTCCTCTGGGGGCTCTGCTACCGGATGACCGGCGTGGCGGCGGACGCGGACGACCTGGTGCAGGACGTCTATGCGCGCGCGCTCGCGACGCCTCCGGAGCGCCTGGACACCCTGCGTCCCTGGTTGACCCGCGTGGCGGTGAACCTGGCGCGAGACCACCTGCGCCGCCGCCGTCGCGAGGGCTACGTCGGTCCCTGGCTGCCTTCGCCTTTGGAGACAGGCGATGAGGAGGTCCCTCCCTCGGTGGAGGCGAGGCTCCCGGGCGGCGGCTCGACGGAGGGACGCTATGAGTTGCTGGAGAGCGTCTCCTTCGCCTTCCTCCTGGCGTTGG # Questionable array : NO Score: 2.52 # Score Detail : 1:0, 2:0, 3:0, 4:0.74, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AAACGTGTCCGACAGTCGGACAGGTTG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-9.00,-9.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [1-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [23.3-26.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA //