Array 1 181255-180083 **** Predicted by CRISPRDetect 2.4 *** >NZ_LJAN01000002.1 Enterobacter sp. OLF enk50.contig.1_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 181254 28 100.0 33 ............................ TGTTCCGACACTGCGTTACCCGTCAGCTGCGCC 181193 28 100.0 32 ............................ TGCAAAAATCCGCCACGTAATCAAGACTCGAC 181133 28 100.0 32 ............................ GTTGGCAGTGGGTTCACTCTCACAACGCCTGA 181073 28 100.0 33 ............................ TGATGGTTGGTTATGCACGAGAAAAGGGAACGA 181012 28 100.0 32 ............................ TGCACTAACTGATTGATGCGAGGGTAGTTGTA 180952 28 100.0 32 ............................ AGTCATTTCAACGGGGCCATATCAAAACGTGA 180892 28 100.0 32 ............................ TGTTGTACTTCAGGCGACAGCGGCAGTTTTTC 180832 28 100.0 33 ............................ GTGCACGTTCGTGTTCAACCCGCAGATAGCGTC 180771 28 100.0 32 ............................ AGGAAACCCTTCTGATCCATGAGAACGAATGG 180711 28 100.0 33 ............................ CTACACTTCGGGTTACGATCAGCCATTTCAACT 180650 28 100.0 32 ............................ GTCGCTATGAGCTGCACCGGCTCAACAAAAAC 180590 28 100.0 32 ............................ AGAATCCCGGAGGACGGGATGGTGTTAAAACT 180530 28 96.4 32 ..G......................... TCTTCAGGCATGTTGCAAATATGAACGCGATC 180470 28 96.4 32 ..G......................... AATCACGATAGTCCGGAGTATCGAAACTCTCA 180410 28 100.0 32 ............................ TCTTTAATCCGAGCCTCAAGGACATCGTTTGT 180350 28 100.0 32 ............................ GAAAACCTCCTGCACGGAGGCGCGAAAACAGA 180290 28 92.9 32 T....T...................... AGTCCGACACTGTGTTTCCGTCTGTTCAGTAC 180230 28 100.0 32 ............................ ACAATCTGAACTCCTTACCTTGTCACAGATGC 180170 28 78.6 32 .C.T.G...AA.............T... GTCGCGGAATACAACGACGCCATCTATCAATA 180110 28 78.6 0 ...............C.....AACC.T. | ========== ====== ====== ====== ============================ ================================= ================== 20 28 97.1 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : ACGGTTTGCACAAGTTATTCGGCGGCGTGGGCTTTATCAGCGGCATGCTGGTGGAAAAAGGGTTGCCGGGGTTTATCGCTTATGGCGTGTTGATTGGCGAAGTGGTGGCACCGATGTTGATTATTGTCGGGCTCTTTACGCGCCCGGCCGCGCTGATGCTGGCGTTTACGATGATTGTGGCATGGCTTATGGTAGGAATGGGTGAAACGCTCGCCCTCGATAAGGTTGGGGCATGGGCGATTGAAAGCCTGGTGTACTTCTTTATTGGCTCGCTGGCGGTGGCATTTTTAGGGGCAGGGCGGTTTGCGCTGGGGAAAGCACCGGCGTGGCGTTGAGGTTTGTGCTCTGGTATGAAGGAAGGGGTCTATAGACCCTTTTTTATTGGCTGTTTTTAACTTATTGATTTTATTGTGCTGAAATGTATGTTAAGAAAAAAGGGATCGAGACGATTTTTTAGGTTATTTCTTTATCTGACAACGTGATAGGTGTAGATTGTTCCA # Right flank : TGTAGTTCGGCACAAACACTGTGCCGCCTGATTATAAGCCCGGTGGCGCTAGCGCTTACCGGGCCTACGACGATCCAGCCCCTACAAGGTAGGCCGGGTAAACGCAGTGCCACCCGGCAAAAACGGGGGCACCGCATCAGATTATGCGAGGACCAGATCCCCCTGCGGATGGCATGAGCACGCCAGCACGTAACCTTCGGCAATTTCCGCGTCGGAGAGCGTCATGGTACTGGTGACAGTGTACTCACCTGAAACCACTTTCGTCTTACAGCAACCGCATACGCCCGCACGGCAGGCGGCCACTACCGGTACCTTATTGCTTTCGAGTGCCTCCAGCAAAGTCGTTCCCACGCGGCCAAAGAAGGTCTGCGCAGGCTGTAGCTTAGTAAACTGAATCCCGCTGGTTGCCGCCTCCGCTACCGGCGTGAAGAATTGCTCCTTGAAGAAGCGGGTCACGCCAAGCGCCTTCACTTCTTTCTCGACGATATCCATGTAAGGCG # Questionable array : NO Score: 6.11 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [14-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [43.3-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 104664-103492 **** Predicted by CRISPRDetect 2.4 *** >NZ_LJAN01000008.1 Enterobacter sp. OLF enk50.contig.5_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 104663 28 100.0 33 ............................ TGTTCCGACACTGCGTTACCCGTCAGCTGCGCC 104602 28 100.0 32 ............................ TGCAAAAATCCGCCACGTAATCAAGACTCGAC 104542 28 100.0 32 ............................ GTTGGCAGTGGGTTCACTCTCACAACGCCTGA 104482 28 100.0 33 ............................ TGATGGTTGGTTATGCACGAGAAAAGGGAACGA 104421 28 100.0 32 ............................ TGCACTAACTGATTGATGCGAGGGTAGTTGTA 104361 28 100.0 32 ............................ AGTCATTTCAACGGGGCCATATCAAAACGTGA 104301 28 100.0 32 ............................ TGTTGTACTTCAGGCGACAGCGGCAGTTTTTC 104241 28 100.0 33 ............................ GTGCACGTTCGTGTTCAACCCGCAGATAGCGTC 104180 28 100.0 32 ............................ AGGAAACCCTTCTGATCCATGAGAACGAATGG 104120 28 100.0 33 ............................ CTACACTTCGGGTTACGATCAGCCATTTCAACT 104059 28 100.0 32 ............................ GTCGCTATGAGCTGCACCGGCTCAACAAAAAC 103999 28 100.0 32 ............................ AGAATCCCGGAGGACGGGATGGTGTTAAAACT 103939 28 96.4 32 ..G......................... TCTTCAGGCATGTTGCAAATATGAACGCGATC 103879 28 96.4 32 ..G......................... AATCACGATAGTCCGGAGTATCGAAACTCTCA 103819 28 100.0 32 ............................ TCTTTAATCCGAGCCTCAAGGACATCGTTTGT 103759 28 100.0 32 ............................ GAAAACCTCCTGCACGGAGGCGCGAAAACAGA 103699 28 92.9 32 T....T...................... AGTCCGACACTGTGTTTCCGTCTGTTCAGTAC 103639 28 100.0 32 ............................ ACAATCTGAACTCCTTACCTTGTCACAGATGC 103579 28 78.6 32 .C.T.G...AA.............T... GTCGCGGAATACAACGACGCCATCTATCAATA 103519 28 78.6 0 ...............C.....AACC.T. | ========== ====== ====== ====== ============================ ================================= ================== 20 28 97.1 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : ACGGTTTGCACAAGTTATTCGGCGGCGTGGGCTTTATCAGCGGCATGCTGGTGGAAAAAGGGTTGCCGGGGTTTATCGCTTATGGCGTGTTGATTGGCGAAGTGGTGGCACCGATGTTGATTATTGTCGGGCTCTTTACGCGCCCGGCCGCGCTGATGCTGGCGTTTACGATGATTGTGGCATGGCTTATGGTAGGAATGGGTGAAACGCTCGCCCTCGATAAGGTTGGGGCATGGGCGATTGAAAGCCTGGTGTACTTCTTTATTGGCTCGCTGGCGGTGGCATTTTTAGGGGCAGGGCGGTTTGCGCTGGGGAAAGCACCGGCGTGGCGTTGAGGTTTGTGCTCTGGTATGAAGGAAGGGGTCTATAGACCCTTTTTTATTGGCTGTTTTTAACTTATTGATTTTATTGTGCTGAAATGTATGTTAAGAAAAAAGGGATCGAGACGATTTTTTAGGTTATTTCTTTATCTGACAACGTGATAGGTGTAGATTGTTCCA # Right flank : TGTAGTTCGGCACAAACACTGTGCCGCCTGATTATAAGCCCGGTGGCGCTAGCGCTTACCGGGCCTACGACGATCCAGCCCCTACAAGGTAGGCCGGGTAAACGCAGTGCCACCCGGCAAAAACGGGGGCACCGCATCAGATTATGCGAGGACCAGATCCCCCTGCGGATGGCATGAGCACGCCAGCACGTAACCTTCGGCAATTTCCGCGTCGGAGAGCGTCATGGTACTGGTGACAGTGTACTCACCTGAAACCACTTTCGTCTTACAGCAACCGCATACGCCCGCACGGCAGGCGGCCACTACCGGTACCTTATTGCTTTCGAGTGCCTCCAGCAAAGTCGTTCCCACGCGGCCAAAGAAGGTCTGCGCAGGCTGTAGCTTAGTAAACTGAATCCCGCTGGTTGCCGCCTCCGCTACCGGCGTGAAGAATTGCTCCTTGAAGAAGCGGGTCACGCCAAGCGCCTTCACTTCTTTCTCGACGATATCCATGTAAGGCG # Questionable array : NO Score: 6.11 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [14-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [43.3-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //