Array 1 35470-31361 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAZSH010000001.1 Acinetobacter indicus strain AI8 NODE_1_length_225204_cov_186.616008, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 35469 28 100.0 32 ............................ AATACCGCGGTCAATCGTCACAAAGCAGCCAG 35409 28 100.0 32 ............................ AACTGGTGTGACTGAGGTGCTTGTGACCAAAA 35349 28 100.0 32 ............................ TTCCATTTGTCTGGCCAGGCTGTGCATATCCG 35289 28 100.0 32 ............................ TGGACAGAAGGGACCCCGGCGGATAAGGCATC 35229 28 100.0 32 ............................ GTCAAAATAAAGCCATATTAGTAATGAGTTTT 35169 28 100.0 32 ............................ TGGTGCGACCGGATGCAACAGCCAAACATGCA 35109 28 100.0 32 ............................ AAGCAGAAGCCGCCCAAACCAACCCATGCCAA 35049 28 100.0 32 ............................ GAAAAGCAAGGCGGCTAAACCCGCCCAGAATT 34989 28 100.0 32 ............................ AAAACGCGGACGCACACCGGCCTCAACTGAAG 34929 28 100.0 32 ............................ ACGAAGCGACATTCCATTGAAATAAGTATTAC 34869 28 100.0 32 ............................ ACTGGACCCGTAACTTCATAAACCCATTGCCC 34809 28 100.0 32 ............................ AGGTAGGCAGTGAAGTTTTTTAAACGCTGGCT 34749 28 100.0 32 ............................ TTTTCAAGTATTCGTTACAGAAGACTATTTGA 34689 28 100.0 32 ............................ AGCAAACAAGGTTGCCTCGGTGGTCGATTCAA 34629 28 100.0 32 ............................ ATGCTGAATAGGCTTGGGTCCTACAAATACAT 34569 28 100.0 32 ............................ GGTAATACGGAATTGAAACGGCCGGTCATAAA 34509 28 100.0 32 ............................ GCGCTGTACACGAAAGGCGGCGATTAAGCGTC 34449 28 100.0 32 ............................ CATCGCGCTCGATAACCTTGCGTCTTATTTTC 34389 28 100.0 32 ............................ ATCAATTACGCTGACGTATTTCACATATTCAA 34329 28 100.0 32 ............................ AAATCTTAGGCTGACGGTTTTTGAGCCAAAAA 34269 28 100.0 32 ............................ CGAAAGGGGCTTTTCTTTTGCCTGAAATAAGA 34209 28 100.0 32 ............................ TGTGTCACGCCGTCAATAGTAATATCATCAAC 34149 28 100.0 32 ............................ CAGAAGTGACCGAGCCAATCGCAGGCACTGAT 34089 28 100.0 32 ............................ TGAACGAGCATTTCATTGAAGCACGCTTGACC 34029 28 100.0 32 ............................ TAAATGATCAAATTTTGATCAGAAAAAAGCCC 33969 28 100.0 32 ............................ TTGTTGTTCAAGTCATGCGGGCCATAGTGATA 33909 28 100.0 32 ............................ GTACCGATGGTATCGTGACCGAGAAAAGCGTT 33849 28 100.0 33 ............................ TGTTTGCTAAACAGTGGGTGCTGTAAAAGGCAT 33788 28 100.0 32 ............................ GCTTCGACCTTCCGCTGTTGATTCGAGAGTGA 33728 28 100.0 32 ............................ TGTGAGTTTTGAGGTTTGCTTTTCGGCTTCAC 33668 28 100.0 32 ............................ TCCGAGAAGCATATTTTCACAAGCTCCCGATG 33608 28 100.0 32 ............................ TTATCTACCCCAATCAGGATCGCGCGGCAATT 33548 28 100.0 32 ............................ AATACCATGATCTGGCTTGCAAAAGTCGGTAC 33488 28 100.0 32 ............................ CAGGATGGTCGCAATACGCCACCACGCCATAA 33428 28 100.0 32 ............................ AGTTTGGGCCGCTCATGTAGCCACGGATGAAA 33368 28 100.0 32 ............................ AGAGTGTATCCGAGCCTTTAGTTGTCCCGATG 33308 28 100.0 32 ............................ AATTTCGGCTTTAGTGGCAATTGCATGGTCGC 33248 28 100.0 32 ............................ AGGTCGCCGTTATTGCAGACTGCAAAGTTTGT 33188 28 100.0 32 ............................ TCAGACTGATTCCCAACCGTCAAAGTTAATAG 33128 28 100.0 32 ............................ ACAAGCTCTGTTGCTAATTGTCGGTATTGACT 33068 28 100.0 32 ............................ GGAGTGGGCGGTGGCTGTAAACCTACATAATG 33008 28 100.0 32 ............................ AAGCGCGTTTCTTTCAACAAAGAAAAGGAAAC 32948 28 100.0 32 ............................ TTAGTTAAACAGCGTGACCATGTTTCTGCGAA 32888 28 100.0 32 ............................ ACAAGCATGATCACAAAAGGCAGTTCACTATA 32828 28 100.0 32 ............................ TGCCCGTAGATCGTGCGGTACCCTTCTGACAG 32768 28 100.0 32 ............................ ACCCAGAGACAAGACACTTGCCAGCCAAAAGC 32708 28 100.0 32 ............................ AATAGGTCAAATGTAGATGCTTACATCACACC 32648 28 100.0 32 ............................ GCGTGGTAATACTCGGTCTTTTGGCAAGTCCT 32588 28 100.0 32 ............................ AATATGGCGCTATTTGAATCTGACCTAAAAAG 32528 28 100.0 32 ............................ TTTAAACAATTAAACAAATGTTCATTTAAACA 32468 28 100.0 32 ............................ TCTACAGGTTTTTTACCTTTTAGGATTTGAGT 32408 28 100.0 32 ............................ GTCTATTGTGCCGCCGTATGTCGCGCTGTATT 32348 28 100.0 32 ............................ TGAATGCGGTCTCTTTGGCCCGGATTGCGAAG 32288 28 100.0 32 ............................ TGATACTTTGTAGCCCCAAACTCTAAAACGCG 32228 28 100.0 32 ............................ TAACGGCGGCAGGCCGGATGCCTCACGCAACG 32168 28 100.0 32 ............................ GTGTAGAGCAGGACGGGGCATTACATACCCGG 32108 28 100.0 32 ............................ AAATGGAAAAGGAATTTACTCTATCAAGAAGC 32048 28 100.0 32 ............................ CCAAAGTTTAAAACAACGTTGTGTGAGTCAAC 31988 28 100.0 32 ............................ TGTATTCACCGCTCTCGCAAAGTCTTACTGTT 31928 28 100.0 32 ............................ TGGTACTGGATCCCGGCCTCATTTCCTAAAAT 31868 28 100.0 32 ............................ GCTATGCCTTTTCAAGTATTCGTTACAGAAGA 31808 28 100.0 32 ............................ ATGCACAAGTCGCATCACCACCACCACCATCA 31748 28 100.0 32 ............................ ATGCGGAAAATGTTGCCTGGGGAAGATCGGCA 31688 28 100.0 32 ............................ TGCAGAATGATCGCGCCTGAGATTGTTGATGT 31628 28 100.0 32 ............................ AAGAACGACCCATTGTCTGCTGCGGTAAAATT 31568 28 100.0 32 ............................ ATCATATTTTTTAATGGCATTTATATTATAAA 31508 28 100.0 32 ............................ ACCGAATCCGCTGCATCCAAATACCCCTGAAG 31448 28 100.0 32 ............................ ACCATCAACCAGAGTTGCTTGATCAGAGTAAG 31388 28 96.4 0 ........................A... | ========== ====== ====== ====== ============================ ================================= ================== 69 28 99.9 32 GTTCACTGCCATGTAGGCAGCTTAGAAA # Left flank : TAGATATCCGAAAATGGCTAGAACGTTTAGAAGATTATGTGCATATCACATCAATTCGTGAAGTACCTAGCGATATTAAAGACTATGCCATTTACAAGCGTAAACAAGTGAAAACCAATGCCCAGCGTTTGGCACGGCATCGTATTAAACGTGGAGATATTGGTTTTGAAGAAGCATTAGCACGATATAGCAATGTGGTGACAACCACTGATTTACCCTATATCGAAATGCAGAGCTTAAGCAGCTCAGATGAGCAAAGCAAAAAGCGTTTTAAATTGTTTATTGAAAAACTTCCCGCTGAAAAATCTGAAAATCAGGTTTTTAGCACCTATGGTTTAAGTTCGGAAAGTGCTGTACCTGAATTTTAACCCGATATTTTTTTGACTCTTTAACAGCTTAATAAAATCAATGAGTTATGATGGTGAGTTAAAACTTGGGTCTTTTATAGGTTTTGGACTTTAACTTACTGTTATAACTTTATTTTTTGTTTTAAAATTACT # Right flank : TATTTAAAATGATTCATTCAGAAAGGGGGCTAGAAGAATTTATGCTGAAAATTTATGGTGTGAAGCAAAATTAGTTTAAGAGAGTTCCTTTTTTAACAAATACTTAGTATCTTATCTCCACCATAAATGGGGGAAATATAATGAAAAAATTAATTTTAGCTTTAGCTATCGGGGTTATTTCTACTGCTGCAGTTGCTGAAAAACCATTAACTTTTAGTAAAGGATCGCCTGCTGTAATCGGTACCAGTCCAGATTATGTACATCATGAAAGCAGCTCTCAAATAAATAATACAAATCAATTTTCTATTGCGCTTGGCTATGCCGGATCAAAGTTAGGCTCTGATGAATTTCTCGGAACCGAATCTTTTGATGGCTTATTTGTGAATGCTGCTTATCAGGTACATCCTAAAGCTAGCCTTTGGGCAGAGTATATATTCCAAAGTTCAGATATTGACTACAATCAATTTGCATTCGGTTATAAATACAAATTTCTGGAAAGC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCATGTAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCACTGCCATGTAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.40,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [70.0-81.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.18 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //