Array 1 21684-21248 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV808728.1 Anaerococcus sp. HMSC065G05 Scaffold452, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ======================================= ================== 21683 32 96.9 39 ..............................G. CCTCCTGTAAGAACTATGCCTATCATGCCTATAATCATT 21612 32 100.0 35 ................................ TAAATCTAAATCTTCAAGTTCGTCTAGTTCTGATT 21545 32 100.0 36 ................................ AAAATATCATCTAACTGACCTTTAATCAAACCAATA 21477 32 100.0 35 ................................ ATAATCAATATTATTTTTAGTTTTTGATAATTCAT 21410 32 100.0 34 ................................ TTTTTAATATTGTTAAGGATAAAAAAATAAATAC 21344 32 96.9 33 ...........T.................... TTAAATGTACAAGATAAGGATGGCTTATATCAT 21279 32 96.9 0 ...........T.................... | ========== ====== ====== ====== ================================ ======================================= ================== 7 32 98.7 36 GTCACTCCCTTCACGGGAGTGTGGATTGAAAT # Left flank : TTAAAAAAAGTCTTGCAAAGACTCAAAATTTGCAGTCACTCCCTTCACGGGAGTGTGGATTGAAATCATTATCAGCATATAAATCTGCCTGAGCTATTTTAGTCACTCCCTTCACGGGAGTGTGGATTGAAGTCCTCCTGTAAGAACTATGCCTATCATGCCTATAATCATTGTCACTCCCTTCACGGGAGTGTGGATTGAAATACTAAATATTCCATTTAATTACCTTTCGTTCATAGCGTCACTCCCTTCACGGGAGTGTGGATTGAAATTTGAACATCAGTTAAAAAACTATCAACATCATTAAAATGTCACTCCCTTCACGGGAGTGTGGATTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTCCCTTCACGGGAGTGTGGATTGAAATTATTAAACGTCTTTTTGAACGTAAAAGCGTTAAA # Right flank : AGCTTTTATTTTAAAGCACAGGGAGCATGGTAATGGTAGGTCACTCCCTTTACGGGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTCCCTTTACGGGAGTGTGGATTGAAATTTTAATATTTCTAGTATTTTTAAGATTAAGTAATCGTCACTCCCTTTACGGGAGTGTGGATTGAAATAGTATTATCATAGTGCCAAAGAAAACAATTAAGCGTCACTCCCTTCGCGGGAGTGTGGATTGAAATAATTAAAAGATATTTCAGCAAAGAAGATTTAAATATGTCACTCTTTTCGTGATTGTGATGATTTAAATGATCCCAGGAATTAAAAAAATCAGAATATTATTTGCTAGTTTATATATGAAAGTTAATTTTTAATATAATTTTACGTTTTTATAGAAGAATTAATGCTTTATTATTCGTCTCA # Questionable array : NO Score: 9.20 # Score Detail : 1:0, 2:3, 3:3, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACTCCCTTCACGGGAGTGTGGATTGAAAT # Alternate repeat : GTCACTCCCTTTACGGGAGTGTGGATTGAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCTCCCTTCACGGGAGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.80,-5.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [1.15,9.27 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 22150-21912 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV808728.1 Anaerococcus sp. HMSC065G05 Scaffold452, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ======================================= ================== 22149 32 100.0 35 ................................ CATTATCAGCATATAAATCTGCCTGAGCTATTTTA 22082 32 96.9 39 ..............................G. CCTCCTGTAAGAACTATGCCTATCATGCCTATAATCATT 22011 32 100.0 36 ................................ ACTAAATATTCCATTTAATTACCTTTCGTTCATAGC 21943 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ======================================= ================== 4 32 99.2 37 GTCACTCCCTTCACGGGAGTGTGGATTGAAAT # Left flank : TTTACCGCATATTCAAGCACAACTTTTAAATAGTTATTTAAGAGGAGATATAGAGTCCTATCCACCTTATATAAGGAAGTGATAAATGCAAGTATTAATTACATATGATGTAAAGACGTCAAGTAAAAAGGGAAATAGAAGATTAAGACAAGTAGCTAAAATATGTACTAACTACGGGCAAAGAGTACAAAATTCAGTATTTGAATTAAATATCTATCCTTCAGATTTAGTAAAAATAAAATCTCAACTAAAAAAAGCTATAGATTTAGAAGAGGATAGCATAAGAATATACAATTTAGGGAAAAATTGGGAAAGAAGGGTAGAATCATTAGGAAAAGATGAAACATACAACCCTGAAAAAGATTTATTGATTATTTGAGGTTCTTATTTGAACATATAATAAGTAAATCTATCTCATATATTTGATAAAAATTAGATATATTTTTTTAAAATATAGGCCTAATTTTTAAAAAAAGTCTTGCAAAGACTCAAAATTTGCA # Right flank : TTGAACATCAGTTAAAAAACTATCAACATCATTAAAATGTCACTCCCTTCACGGGAGTGTGGATTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTCCCTTCACGGGAGTGTGGATTGAAATTATTAAACGTCTTTTTGAACGTAAAAGCGTTAAAGTCACTCCCTTCACGGGAGTGTGGATTGAAGTCCTCCTGTAAGAACTATGCCTATCATGCCTATAATCATTGTCACTCCCTTCACGGGAGTGTGGATTGAAATTAAATCTAAATCTTCAAGTTCGTCTAGTTCTGATTGTCACTCCCTTCACGGGAGTGTGGATTGAAATAAAATATCATCTAACTGACCTTTAATCAAACCAATAGTCACTCCCTTCACGGGAGTGTGGATTGAAATATAATCAATATTATTTTTAGTTTTTGATAATTCA # Questionable array : NO Score: 8.82 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACTCCCTTCACGGGAGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCTCCCTTCACGGGAGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.80,-5.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [65.0-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [1.15,9.27 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //