Array 1 463608-464898 **** Predicted by CRISPRDetect 2.4 *** >NZ_GL379580.1 Lactobacillus paragasseri JV-V03 SCAFFOLD1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 463608 36 100.0 30 .................................... TAATGCTTCGAAATGTTACTATTCAGGTAA 463674 36 100.0 30 .................................... TAATTGATGAAAGGTACCATACAAACCAAT 463740 36 100.0 30 .................................... ATAGAAAATTAAAATACGAGAAGAATCACG 463806 36 100.0 30 .................................... CCATAAACGGATTAGCCATAAAGACTGCTT 463872 36 100.0 30 .................................... TTATTAAGCATATAACTAATCGGCCGTTTG 463938 36 100.0 30 .................................... CTACTCTTGCAAAGCATGATGCAGTCTTAC 464004 36 100.0 30 .................................... ATTGTTCTGGATTGGTTAAGTATGCCTTAG 464070 36 100.0 30 .................................... GTGGCACCTTGCCAAATTAACCCACCCATA 464136 36 100.0 30 .................................... GAAAATTGATACTGAGGCTACCCGTGCTAA 464202 36 100.0 30 .................................... GATCTTTTTTGCTCTGTACTTGATGCGCTC 464268 36 100.0 30 .................................... CAAGAGTAGATAAGCTAGATGGAGGCGCTG 464334 36 100.0 30 .................................... CAAGAGTAGATAAGCTAGATGGAGGCGCTG 464400 36 100.0 30 .................................... CTTACAACATTAAGACAAGCTTACATGGCG 464466 36 100.0 30 .................................... GGAGAATTAGCAATGGCGGGGTATCGTCCT 464532 36 100.0 30 .................................... ACATATTTAAAACCTTGTGTATTAACATCT 464598 36 100.0 30 .................................... AAAGAAGCTGGATTAATCAAATGAGGCTAA 464664 36 100.0 30 .................................... AAAAGCCTAAAGTGGAAAAGCCAATACAGG 464730 36 100.0 30 .................................... AATTTTAGAAATAAGCCAGTTCGAAGGGCT 464796 36 100.0 30 .................................... GAAGAAAAGAAAAAATCAGTTGCTGAATCT 464862 35 94.4 0 ..........................A......-.. | TA [464891] ========== ====== ====== ====== ==================================== ============================== ================== 20 36 99.7 30 GTTTTAGATGGTTGTTAGATCAATAAGGTTTAGATC # Left flank : AATCAAAATATTTTTGACAAGTATATGCCCGTAATTATAAAAGAATACATTGAAGGGCTTAATGAAGCGGATCGTAATGAAATATTAAAAATGTACCATAAACTAGAAGGGATAATTCAAGATTCGTTGCTACTTGAAGATCTACCATTAGAACTTGAATTTAATGAAGACTTGAAGAAATTTTTAAAGTTAGAAAATCTACATTTAGATACTAAGTTTTTAGAAGAACCATATGCTATAATTGAATCGATCTTAAAAATACATCAAAATTATAATCTCCATTCTATACCTGTTGCTTGTAATATAGCTCATTACTTAAATTTAGCTCAGGTAGGGATGTTAAATGATCTGTTAAAAGAAATGAAGTTGAAATTAATTTTAATAGAATTCACATCTGCGGATTTTCTGGTTTTTCCAAAAGATGTTGATTATTTCTACATTGATCAAGATCTTGTTGATTGGTACTAACTGTCCGATTAAAAACTGATTATAAAATTTCG # Right flank : CGTAATTACACTACTGGTCCATTGCTTTTGCAATGGGCCTTTTTATTATCTTCCAAACCGTTTTTCACCCTACAGTGCAAAAGTCTATTTTAAATGTAAGTGCCTATTTTATACCATATAAGTGTCAAGAAAAATAATATTAATGAATAATTTAAAAACGACTAAGAATGTTTTATTAGTATGTGGTTTAAGTGCATCATCAGGTTTTATGGCTGCTAACATGAGAAAAGCATCAAAGAAAGTTGGTTTAGATTATAAAATTCAAGTTCGCAGCGAAGCAGAATTAGGTGACTATGCAGATCAAATTGCCGCCTTAATGTTGGTTTTCTTACTTAAAGACGGAGTTGGTACGATTAAATTACAAGTACTTGACAAGGTAAAGTAATTTTAATGAAACTAGATTACTATTCAATTTCCATTTGATTTTATGGATTACATGAAATTAGACAGGCAAAGAATCATTGCGGATCTTTTCCTCAGGGCGCGGTATTTATAATGCA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGATGGTTGTTAGATCAATAAGGTTTAGATC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: F [matched GTTTTAGATGGTTGTTAGATCAATAAGGTTTAGATC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.90,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], //