Array 1 3015842-3012869 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP048131.1 Acinetobacter baumannii strain D46 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 3015841 30 96.7 30 ............................G. ACAGTGCGCTTAGGTGGCGGAAAAATCATT 3015781 30 96.7 30 .............................G TCTCACGGAGAACAATTTTTTCATCAACTT 3015721 30 93.3 30 ............................AG TCGGCACAGGTAGCAGTTGAGCAGTCATCG 3015661 30 93.3 30 ............................GA GTTCTTTCATAACGTAGGCTTTAATGCCTG 3015601 30 93.3 30 ............................AA CGTTTCCGCAAATCTGCGAAATACTCGTTG 3015541 30 93.3 30 ............................AA TATAGTGGCATCTTCGAGAGTTAAAGGCGG 3015481 30 96.7 30 ............................A. CAGAATTTTGTTTACAAGTTCTAAGCGGGA 3015421 30 93.3 30 ............................AG TTTGAACATCTAATAATTGAGCTGTAATAC 3015361 30 93.3 30 ............................GC CTCCAATTGATCCAATTGATCAACCTCCAT 3015301 30 96.7 30 ............................A. ATGGTGGTTGTTATAAACCGCCTAATGATA 3015241 30 96.7 30 ............................A. TAGAAGACGTGGACTCCCCCAACCTTTCAA 3015181 30 100.0 30 .............................. TGCGCTCTTGCGGTTATTATCAAAGACCTC 3015121 30 93.3 30 ............................AG CATGTGCTAAATCAGGGAAAAGAAAAGCCA 3015061 30 96.7 30 .............................A ATTATAATCGCAATAGCTTCAATACTCCTA 3015001 30 93.3 30 ............................AG TGCGTGAACATTATTCTTTCTGCATCAGCT 3014941 30 93.3 30 ............................CG GTACGTTCAACGGTCAGCAGATTTGTGTTA 3014881 30 96.7 30 ............................A. TAATAGTAATCGTAGTGGCGGTGTGTCAAT 3014821 30 100.0 30 .............................. AACTTGCTTACGGCCAACACCTGTAATCAA 3014761 30 96.7 30 .............................A CCAAACCAATCAGCAATGGAAAAACCACCG 3014701 30 96.7 30 .............................A TAAAACGCGCAAAAAAATATAAGGGACGTA 3014641 30 100.0 30 .............................. AAACTGATTTACAAGCTTGATCAGTAGGCC 3014581 30 96.7 30 ............................A. CATGAAGCTTATTAAATGACTGACATGGCT 3014521 30 93.3 30 ............................AA AGATTCTAGCCCCCTCAATTGAGAAGTTAT 3014461 30 96.7 30 .............................A TTTAGAAAGCTTGGAAAATAAAGGTGACTG 3014401 30 100.0 31 .............................. TGCCGATGCGTGCAAACATTTGCTCCGCTTC 3014340 30 100.0 30 .............................. ATAGATGGCTTTAACTGACTCCCAGCCCAT 3014280 30 96.7 30 .............................A TAAGAAAAATGCAAAAAAGGCATTTATTAG 3014220 30 96.7 30 ............................A. ACACATGTTTTTCTAATAAGAATAAGACAA 3014160 30 100.0 31 .............................. ACCAGATAGCAACTCTCTAGGTCAGATAGAC 3014099 30 93.3 30 ............................CC AGACTTGATTTTTATCACCATTGAAGAGTT 3014039 30 96.7 30 .............................C AGGTAATAAAAAACCGCCCGAAGGCGGTAT 3013979 30 96.7 30 .............................C AAAACGTATGGGTTATTGATGCTCAAGATT 3013919 30 96.7 30 .............................C GTTGCTACGCGCCACGGCGCACCCATCGTT 3013859 30 100.0 30 .............................. GAATCGGCCGCTTTGCGTATAAACACCACC 3013799 30 96.7 30 .............................A AAATCACATCAGGGAAGTGAAGGCGAGCTA 3013739 30 93.3 30 ............................GA GAATGATTTAAATTGCATTAAGCCTTTAAA 3013679 30 96.7 30 .............................G GAAGTCATGAATGTAGGTGTTGAGGATGGC 3013619 30 93.3 30 ............................AA TAGAATTAAAACCACGTTGATAATATAGGT 3013559 30 93.3 30 ............................GA ATTGCACTTGCTAAGCCAATAATGCCAACT 3013499 30 93.3 30 ............................GA CCCATAAATCAAACAAGCCAACATAATTGA 3013439 30 100.0 30 .............................. CCTCAACTGACATTTCCAAATAGTAGAGGC 3013379 30 96.7 30 ............................A. AAAGCGCACAACCCATTGATTTGTATTTTT 3013319 30 93.3 30 ............................AG CAAATAGATCAACTGGTGCGCCCTGTGAAT 3013259 30 93.3 30 ............................GA GATTCAAGTTTCACCGGATGGCACAAGTAA 3013199 30 96.7 31 ............................G. AAAAAAGAGCATTTCCAGCAAAAATTGACGA 3013138 30 100.0 30 .............................. TAAAGCTAAATGAGGGTTAAACCTAAGAAA 3013078 30 90.0 30 .......T....................AA CGTGAACAATTGTTTTAGCTTTGAACATTA 3013018 30 90.0 30 .............C...T..........G. TACTGGGTTGCGGAATATATTCGCAATTAT 3012958 30 86.7 30 A......A.........T..........A. TTTGATCTTTACTTATTCTCGCTTCAAACA 3012898 30 73.3 0 .......A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 50 30 95.2 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCCTAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : AAGATAAACAATAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTAAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGTAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAGCCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGCCAAAGTGACGGTGAAATTACCGATGCAAAATCGCAGTTACCAGAAGGTGTCATTATTGGCCGTACTTGCTTAAACTCTTTAGAGCTTGCTCAAAAAGCAATTGCCGATGGCGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAACC # Questionable array : NO Score: 5.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.76, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.22, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.60,-8.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [14-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //