Array 1 18017-18200 **** Predicted by CRISPRDetect 2.4 *** >NZ_KE384618.1 Dolichospermum circinale AWQC131C 131C_Scaffold35, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 18017 37 100.0 34 ..................................... GGTATATGCTTGACACTAACTGTAATAGGTTTTG 18088 37 100.0 39 ..................................... CGAATATTTCGAGATTTTGATGTAATCTACCTCTTTTTC 18164 37 97.3 0 ....................................A | ========== ====== ====== ====== ===================================== ======================================= ================== 3 37 99.1 37 GTCCCCACTCGCTGGGGACATTAATTGAATGGAAACG # Left flank : TATTCTGTATTTGAATGTCAGTTAAGTAGGGAAAAGTACAATGATTTCCGTCGTCGGTTAAGGAAGATTGTCAAGTTGGAGGAGGATAATGTCAGGTTTTACCCTTTGTCTCGACATACTCTTTCCCAGGTGGAAACTTGGGGGGTGGGTGTGCCTGTGATTGAGCCTCCGGGTTCAATTATTGTGTAAGTAGATTGGCGTTAAAAATTGTCGTTATGACAAGGGAACAGGGAACAGGGAACTGGGAACAGGGAAGAGGTTTTAAGCAACTTTACCTTTCGTTACTTATGTCGGTTTTTTTCCGTTCACCTACTTAGTTTTTCCGAATGTCAGGTAAAATGGCTGTAATGTTGATTTTTTGGTTGGGAACTTAGGTCGCTTGCTGGGTAAGGGTTTTGGGGGGTTTTTTCCGCTGTCGGTTGGTGGTTTTAACACTTTTTTTCCTGACCTTCGGAAACTGTCTCTGGACACCTTGCTGGGTAAGGGTTTAAAATTGAGGG # Right flank : AACGCTCATCAGCAGTATATATAAATACATAATAAAATATGTACTGATATTTTGAGAATCAGTACATTTTAACTATCAATCAATGTTTGGTAAGGGAAATGCTGTAACTTGATAGCAGCATAAACAAGAACCAATGTCAAAGAAAATAAAATATTTTTAATAAAATCCTCAAAGTCAGGAAAAGCGTACAGAGTAAGGGTTAGAGCAAATATTACAAAAATCTTGAGATATTTTAGATTCCTAGACAAACACTGAATCGCGCTCTTATAATTCATCTATAAGCTAAACAGGGGATCTACCGATGACAGCAGAATATTGGCGGGCTAAGATTTGGGGGTTATTACATGACCCTGTATTAAAAGCGTTACATAACAATAGCGGACGGGGTAAAAGTAGCTTCTATGAACAACTAGAAGTAATGAAAGCTTGGGTTGAGACAGGTAAAACCCCAGATCAATCAGGTGGTAAAGTATTAAAAAATATCCTCTTAGCGGATTATA # Questionable array : NO Score: 5.31 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCCCACTCGCTGGGGACATTAATTGAATGGAAACG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [10,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.00,-1.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.15,0.27 Confidence: MEDIUM] # Array family : NA // Array 1 48109-45900 **** Predicted by CRISPRDetect 2.4 *** >NZ_KE384642.1 Dolichospermum circinale AWQC131C 131C_Scaffold6, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================== ================== 48108 37 100.0 32 ..................................... AATAATTCCCTGCCGATCGCTCTTCAGGAGAA 48039 37 100.0 38 ..................................... CGCTGTTTGGTGGCGGCCTCCACCTTATCAAGCCGGAA 47964 37 100.0 36 ..................................... AGATAAGCTTTAGCTTTTAGCAAAATGGCAGCTAAT 47891 37 100.0 35 ..................................... TCTTGTTTGTTACCCTTGATCACCGAAGAAATCGG 47819 37 100.0 35 ..................................... TTTTTCAAGAATCAAGCCGATAATGACATAGCGAC 47747 37 100.0 35 ..................................... CCCGCAGATTAAAACCATGCCCTGAAAAATAAATC 47675 37 100.0 35 ..................................... TTTATTAGCCAAGGGTTTGATGCTAATCATTGATT 47603 37 100.0 34 ..................................... TTCAGCGTAGCTGCAATAATTGGGATAAAGCCAG 47532 37 100.0 35 ..................................... GGCGGCGCTTTTGAAGCCTCCTTAGATAAATCTTT 47460 37 100.0 35 ..................................... GTTTCAAAAGCTGAAGGAGAAAGGCTTACAAAAGC 47388 37 100.0 34 ..................................... TTCTAAAATCAGAAAAAAGATTGAAACACCAAAA 47317 37 100.0 34 ..................................... CTCGCTGAAGCCTCTTCCCTGTGATGCTGCCGAA 47246 37 100.0 35 ..................................... CATAATTCAAGATAGTTGTCTAGTATCTTTAATAG 47174 37 100.0 42 ..................................... GAAACAGGAATATCCGAAGACGGATATCTCATGGAACATCAA 47095 37 100.0 41 ..................................... AGCTTAAAAGTATTTTTGGCTTCTATTGTAAGCTTTTGCGC 47017 37 100.0 36 ..................................... TCTTTTGCCACCCGCTTGCGCTCACATTCTTCTTTT 46944 37 100.0 33 ..................................... AGACAAAGATGGTAAAGACGCGATTGCATCAGC 46874 37 100.0 32 ..................................... ACGACCTTGACCCGCAAGCTATTGAAAAGGCA 46805 37 100.0 34 ..................................... ATCTAATTTTTGATCCAAAAGCCTAACAGGAATA 46734 37 100.0 34 ..................................... ATGACAGAAATTGATCCAAAAATGATGATTGAAA 46663 37 100.0 34 ..................................... AGCAATCAAAATAATACAATCAATAATATTAACA 46592 37 100.0 33 ..................................... GCCCAACCCCGGCGGACAAACTGAATTTTTGAA 46522 37 100.0 36 ..................................... AGATGATACCCCGTGATATCTGTTCATTGCCGTTAG 46449 37 100.0 34 ..................................... CTTTGGCTATGACATAGGGGGAAGTTGGGCAGGG 46378 37 100.0 35 ..................................... GTATCTGTATTAGGCAGCGCGAAAGGTTTCACTAC 46306 37 100.0 37 ..................................... AAGGCAGCACGCCGCAGACATGACAATTCCTGATTTG 46232 37 89.2 39 G...A.....C.....A.................... TTAGAAAGAATCGGGATCAAAAGGATCAGGATCAGGATC 46156 37 89.2 36 G...A.....C.....A.................... TTGTTCACCGAGCTAACAAAATTTCTCCTTCCCGAA 46083 37 89.2 40 G...A.....C.....A.................... TTGGTGTACTCGGACGCTCATGGATATTTCCCCAGGAGTT 46006 37 89.2 33 G...A.....C.....A.................... TACTTCTACCTATTGCTTTTTGAGCGATCGCAA 45936 37 89.2 0 G...A.....C.....A.................... | ========== ====== ====== ====== ===================================== ========================================== ================== 31 37 98.3 35 ATTGCAATTTAACTTACTCCCTATTAGGGATTGAAAC # Left flank : ATGAATGTTGTGGTTTCTTATGATATTTCTGAGGATAAACGACGAACTAAAATTCACAATATCCTCAAGTCCTATGGGCAATGGGTACAGTATAGTATTTTTGAATGTGAGTTAACTGATACTCAATATGCTAAACTGCGATCGCGTCTTAATAAACTCATTAAACCTGATACCGATAGCATCCGTTTTTATTTCCTTTGTGCTTGCTGTCATGGTAAAATAGAGAGAATTGGTGGTGAACAACCCCGCGATCATACTGTTTTCTTTGCTTAATGCGCGAATGGGTGGGTGTAAAAAATTTAGATGGACAAAAAATGGCTGAAATCTTTTCTACATCAGCTTTTGATATGTTTTATCTCTGTTACCCATCCGCGCACCTTACACAGCAGGAGTTTCAGCTATTTTACCCCTTGACACTTTTTTTGAATTGGATTATGATAAGAACATCCGCGCAACTGAACCTTGAAAACCAAATATATATAGGCTTTCAGCATTCCGCC # Right flank : TTTATAAAAGCAAACTTGAGAGTATTCGAGAAATTATCGCAATTTAACTTAATACCCTCTTTTTTATTTTTTTAATCTTAATTAATTCTGAAACTCCTGGTTGATAATCAATTGAGAGTGTTAATTAGCATAACATTATTGGCAGCTATCCAGTTTATTTATGTTATTTTACCATAACTACTCTAGGAGAGCCATTTTTTCGATTCTTTTAGAATATATCCTAGTCGGATTGTTAATGATAATTAGGATGATTATTGTCCTAGAATATGCTCATTAAAAATTCAGCAGATTTTACTCCTAACTCCTGTTGAGAACTTGCAAAGAAATGTTTTGAGAAACTGTTTTAAAATCTAAAGTATACATAAATATCTCTGCTAAAGGATTTCTAACCTGCGTAGGCAGGTTTTGTCTGTGTAGATGCGATTTTTATCGCCGATTTTAGCTTTTAAAACAGGCTTTTATTGACTCCTAGCTTGCGGATCATAATATCAGTATTCATT # Questionable array : NO Score: 9.17 # Score Detail : 1:0, 2:3, 3:3, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCAATTTAACTTACTCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-5.50,-5.50] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [71.7-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.5 Confidence: HIGH] # Array family : NA //