Array 1 55746-52752 **** Predicted by CRISPRDetect 2.4 *** >NZ_LNVR01000010.1 Xanthomonas translucens strain P3 flattened_line_14, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ===================================== ================== 55745 31 100.0 34 ............................... AAGATCAACATCCCCGGTGCCAGCACCGATGTGC 55680 31 100.0 36 ............................... CTCTTCCGATGTTTCCTGCACGGAATTGCTCTGAGC 55613 31 100.0 33 ............................... TGCTGAGGCACGCGCGCCCATTCGACACCGGTT 55549 31 100.0 34 ............................... TCGTAATTGCTCTTGAACTGGCCGGGGTTGTGGA 55484 31 100.0 34 ............................... GGGCACCACTTCCAAGCGGCTCACGATTACCGGG 55419 31 100.0 34 ............................... AATCTGCCGGACATGCGCGGCGAGTTTATCCGCG 55354 31 100.0 35 ............................... AGGTCATCAACAATCACCGGCACCGCCTCCGGAAA 55288 31 100.0 35 ............................... TGCACGACCCGAAGTACGACGGAACCAGCACGTGC 55222 31 100.0 37 ............................... GACCCGAAATCTCCGGCGTACGCAATTGCATCCTGAG 55154 31 100.0 34 ............................... TGTTGATCCTTGTCGCGGCGGTCTGTCGTGCGCG 55089 31 100.0 35 ............................... ATGCGCTCGCTTGTGGCATGCCTGGCACAGCCAGG 55023 31 100.0 37 ............................... GAAAAGTACGGAATCCCCCATGGATTCGTGGCTGCAA 54955 31 100.0 36 ............................... AACAGAAACGCCTGCGTCTGTGCGAGTTGGCCTTGT 54888 31 100.0 35 ............................... AGGTACGTGATCGAGAATTGCTTGATCGTGTCCGA 54822 31 100.0 35 ............................... GCCGAGGACATGCCGTTCGGCGACCAGTCGCCGTA 54756 31 100.0 36 ............................... GCGGCGTACCGCAGCGGCGCGCAGCCGTCCTCGGCC 54689 31 100.0 35 ............................... TCGGCGTATTCGACGACCAAGCCCGTCGGGCCCAG 54623 31 100.0 35 ............................... TCACACCGGTGTGGGATTGACGTGTCGGTTATGGT 54557 31 100.0 34 ............................... TCGCACGGCGATTTCTTTGCGGTGGCCGATGCCA 54492 31 100.0 35 ............................... TGGTTGGCGATGCTGGATGTGGCCCCGGTCGAGGA 54426 31 100.0 37 ............................... CCGTAGGCGTAGAGCACCGACATGCCTCCGGCGTAGG 54358 31 96.8 36 ...............A............... CCGCCAAGGGTCAGGACAAGGCGCCGGCGCCGAGTC 54291 31 100.0 35 ............................... CATGTCGAGGGCGACCGCAAAGGGACGCGCAACGG 54225 31 100.0 34 ............................... ATCCCACATCATGAGCGATGTGGTCATCTCAAAA 54160 31 100.0 35 ............................... AATTTCCACATGACCCCCGAAGATGAGGATTCGAG 54094 31 100.0 35 ............................... TCGATGGCTTCCACGGTGCACTGAAAGCGGCGGGC 54028 31 100.0 35 ............................... TGCCGTGCTTGCACGCTGCTGTAAGTCCATCAGCG 53962 31 100.0 34 ............................... GGACACGCAGGGGACCATCCTCAAGATACTGGAC 53897 31 100.0 33 ............................... ACCACGGCAAAGCCGGCGAGCCGATGACAACTG 53833 31 100.0 34 ............................... TCCTTGACCGTGGACATTTTCGTCTTGCTTGCCC 53768 31 100.0 35 ............................... GTAATACCACACAAGTCAGCGCGGCGCCGGCAGAA 53702 31 100.0 34 ............................... TTTTGCACAGGGCGACAGCTTCCACTTAGACATC 53637 31 100.0 36 ............................... AAGTCCCAGGTGGCCTCGGCTTTAGGCGTGCCGCAG 53570 31 100.0 34 ............................... CAGGGGATGACGTGCGGGAAGTGTGCGAAATCAT 53505 31 100.0 35 ............................... TTGGCCTGGCGGACTGCCGCGTCGAACCGCCGCCG 53439 31 100.0 35 ............................... ATTGAACTCGCTGTGGCGTGCAACAACCGCCGCCC 53373 31 100.0 36 ............................... TTCCTGGACAACAACCCGGGCGTGGTGCTGGAAGAG 53306 31 100.0 35 ............................... TTGGATAGCCGCCAGATTGCTTCGGCGCGGCTGTC 53240 31 100.0 34 ............................... TACAACAAGGTGCTGAATATCGCCGGCATGGGGC 53175 31 100.0 34 ............................... CCGGATGGGCGCACTTGGGGCTACGACGTGGTGA 53110 31 100.0 34 ............................... GTACGCCTGCCGGAACCTCGGAAATTCCACGCCG 53045 31 100.0 34 ............................... TGGAACAGCGAGAAGCACCACACTCGCATGAGGC 52980 31 90.3 33 ............G................CA ACCGTAGGTTGACTGGTTGGCCTGCCAAATAAA 52916 31 100.0 35 ............................... TCGACCCAGGAGCCGAACGATGCGCTCGAGAGCCG 52850 31 90.3 36 ...............T....C..G....... ATGTATTTGTTCGAAGAACATGTTCTTGCCGGTGTC 52783 31 87.1 0 ......CG.......C.........C..... | G [52756] ========== ====== ====== ====== =============================== ===================================== ================== 46 31 99.2 35 GTCGCGTCCTCACGGGCGCGTGGATTGAAAC # Left flank : ATGAAAAGGCCGCCGCGCCATGATGGTTCTGATCAGCTACGATGTCAGCACGAGTTCCCCCGGCGGCGAAAAGCGACTGCGCAAAGTCGCCAAAGCCTGCCGTGATCTCGGCCAACGCGTGCAATTCTCGGTCTTCGAAATCGAGGTGGACCCTGCACAATGGGCCGCATTGCGGCAGCGCTTATGCGACCTGATCGATCCAGGCGTCGACAGCCTGCGCTTCTATCAGCTCGGCGCGAAATGGGAAGCCCGCGTGGAGCACGTCGGCGCCAAGCCCAGCCTGGACCTCAAAGGCCCACTGATCTTCTGACGCGAACCGCAAGCGACCGGGGAAAGCCGGGCAGGTTCGCGCAACAAACCAAGTCATTGATTTACAAGAAAAACACTAACCTCTTCCGCTCACTACAGGTCCGCGGCGGCCCAATTCGATTGCGTCTCCGAAGGGTTCCGCAAAAGTGCGGACTTTTTTCCAACACCCATCAGCACTTATGCTCAGGGCG # Right flank : TGGCCTGGCGACGATATGTCGTTCTATCGCCTTTGCCCACAAAAAATGGCGCAGTCTCGCGACTGCGCCCAGCGTGCCGCGCCGGCCGGGAGAGAGTCGGCTGGCGCGATCCGTGACTGCGGTGTGCTTAGCGGGACGCGATGCGCATCACTTGACTTCGAATTCCTGCACGGTCCCGGCCGGCTGACCGTTCACGGTGACCTCGGCCTTGTACTTGCCCGCCGGCCAGCCCTTGGCGTTGGTGAAGGAGATATTGGTGGTTTCCGCACCGGCCGTGGTCAGCGTCGCGCTCTGCTCGCCGGCGGTCTGGCCGTCCTGGAACAGCAGCTTGGCGCCGACATTGGTGGTGGTGGAGGAACCCTCGGTTTTCACCGAGACGATGATGGTGTCCTTGCTGCTCAGCGTGCTCAGCGGCGCCACCGTCTTGTCGGCGCCCGCACTGTTGCCCACGGTCACCGAGGCGACCGTCACCGTGCCGGCAGTGGCCGCGGCCGGCGCCG # Questionable array : NO Score: 9.22 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGTCCTCACGGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCGTCCTCACGGGCGCGTGGATTGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-4.70,-5.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [11-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [45.0-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //