Array 1 428790-425586 **** Predicted by CRISPRDetect 2.4 *** >NZ_BMNJ01000002.1 Actinomyces gaoshouyii strain CGMCC 4.7372 sequence02, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 428789 28 100.0 33 ............................ GCGCCGCCTTCTTAATGCCTGGCGCCTTGATCA 428728 28 100.0 33 ............................ TTCACCGCGAAGTTATTCAGGCGGGTCTTGAGG 428667 28 100.0 33 ............................ GCATTCATTGACGCCGAGGGGCAGCCGTCAACG 428606 28 100.0 33 ............................ GCTGATTGATAAGCCTACCTAATTCAAGTTTCC 428545 28 100.0 33 ............................ GGAGATTGTCCGCGAGCCAGCCGAGCAAATGCT 428484 28 100.0 33 ............................ CCTTGGTGTCGACCGTCAGATTCGCTAGGGTCG 428423 28 100.0 33 ............................ GGAGCCCCCCATGGTCACCCACGCATGGATCGC 428362 28 100.0 33 ............................ GAACTGCTGGTCAACCAGGGTGACACGCTTCTC 428301 28 100.0 33 ............................ GGCCCACTCGCTATCATCGGCCGCACCCGAGAC 428240 28 100.0 33 ............................ GGAGCCATTTCCTGAGGCTGCTGGGGTCGGCGG 428179 28 100.0 33 ............................ CCTCATGCGCTACCTCATCGAGCGCTGCCCCCC 428118 28 100.0 33 ............................ CTCGAAGTCGTGGTCATCTGCTCGGATGAGGGT 428057 28 100.0 33 ............................ GCGCTCCGTGCGGCTCTCACGGACACGCCCCTC 427996 28 100.0 33 ............................ GCGCGCGGGGACGTGTGCCGGGTCCGCTACAGG 427935 28 100.0 33 ............................ GGGTACCGAGGTGACCGTCACCGGCCGCCCCCG 427874 28 100.0 33 ............................ GGTTTTGCCGGAGCGGATGGCGCCGTCGAGGAT 427813 28 100.0 33 ............................ GCAAAAAAACGCGAATTCACCGGCCTCTGGTAC 427752 28 100.0 33 ............................ CGGCACCGTGGACATGGCAGCCTGGCGATCCAT 427691 28 100.0 33 ............................ CTCGAAATCGGGGTCATCTGCTCGGATGAGGGT 427630 28 100.0 34 ............................ ACAGGGGGCAGGCGTCCACGATGATCACGGGGGC 427568 28 100.0 33 ............................ CGTCCCCAGTTTCGCCCACAGGGCTTCGGAGGC 427507 28 100.0 33 ............................ GCGGACTGGCGGGCCACGTGGCGCAACTGGATC 427446 28 100.0 33 ............................ CTATCTCTGCCGCCTCGATGGCGACAGCTCAGC 427385 28 100.0 33 ............................ TCGCACATCACGCCCAACCCTCCTCATCTTCCA 427324 28 100.0 33 ............................ GGACGCGGCCGTCCCCGGCGGCGGCAACAGCCT 427263 28 100.0 33 ............................ GGTTGCGGAGGCTCAGGAGACACCAGGATCCCC 427202 28 100.0 33 ............................ GTCTTGGGTGCTCGATTGGCTCTGGTAGGCGAT 427141 28 100.0 33 ............................ CCTTACCGATCGGCTCGGCCCCGTCGGCATCAC 427080 28 100.0 33 ............................ TGGCGACGTCGCGCCTGGCTCGGGCGGCGGTGA 427019 28 100.0 33 ............................ TGCGGGCACGGGCCATGCTGCGGCCGTGTGCGC 426958 28 100.0 33 ............................ CCCATACAAGGTGATCCGCAATCCGCACGCCGC 426897 28 100.0 33 ............................ GCCGGAGTTCTGGACGAGCGACGACATCGCCGC 426836 28 100.0 34 ............................ CCAGGGGAGTCTGGTGTCGCCACTGCCACCCATA 426774 28 100.0 33 ............................ TGCGCGGGCAGCTTGCCGGGGGACGACGCCGTT 426713 28 100.0 33 ............................ GGAGGACTGACCCATGGCAGACGCCGCGACCAC 426652 28 100.0 33 ............................ CCCGAGCGTGATCGGCTCGGTCGACGTGATGAC 426591 28 100.0 33 ............................ TTACGGTAGGGGACGCCGTGCGTCGCAAACGAC 426530 28 100.0 33 ............................ CGTCAGCACTCAGATCGTTGGGGGCGCCGGCGG 426469 28 100.0 33 ............................ GATTCCGGCGGATACGACCACGGAGAAGCGTGT 426408 28 100.0 33 ............................ GATCCCTGACGCGGGGCAGGTCTGCTCCCACCC 426347 28 100.0 33 ............................ TGGCCGACAACCCCGCCCTATCCCAAGAATACG 426286 28 100.0 34 ............................ TGGTCCCGGCGCCCATGGGACGGGCGCCCCGAAC 426224 28 100.0 34 ............................ TTGTTGCGGACGCGCACCCCAGCCTGCACATCAG 426162 28 100.0 33 ............................ CATCACCGCAGAAGCCGCCGCGCTGGATGTGGA 426101 28 100.0 33 ............................ GAACTGCTGGTCAACCAGGGTGACACGCTTCTC 426040 28 100.0 33 ............................ CCAAGGGATCCGGGTGTCTCCCGAGCCGCCGTG 425979 28 100.0 33 ............................ CGGGATCTCGGGATACGCTGAGGGCGGCCAGTG 425918 28 96.4 33 ..........T................. CAAAGTCCCGCCGTCCGCTGCCGTCCTCGGTCC 425857 28 96.4 33 ..........T................. GGTCACCCCGTAGCGCTTCAGACTCTTCTCCAA 425796 28 96.4 33 ..........T................. GGAGAACTGCATCGCCTGCCAGATGACCGAGCG 425735 28 92.9 33 .C........T................. GTGGTCAGTTCTCCGTACGACGCCAGAAGCGTG 425674 28 92.9 33 ...T......T................. CCTCGACCGCCAGATCGAGGCGCTCGGGGCCCT 425613 28 92.9 0 .C.....................A.... | ========== ====== ====== ====== ============================ ================================== ================== 53 28 99.4 33 GTGCACCCCGCGTATGCGGGGATGATCC # Left flank : CGTCTCCGGCGGGGCGAACTACGCCGCGATCGGAGTAGAGGAGGCAGGTGGATGGTAGTTCTGGTTCTCACCGCCGCTCCCGCGCAGTTGCGCGGCTCGCTCACGCGCTGGTTGATGGAGGTCTCCCCCGGAGTGTTCGTCGGGCATCTCGCCGCCCGAGTGCGCGAGCAACTATGGGACCTGGTCAGGGCGTATATCGGTGACGGTCGCGCACTCCTCATTTGGTCCACGCGGTCGGAGCAACATTTCTCTGTGGCCTCGCTCGGCCACGATCGGGAACCTGCGGATTTCGAGGGCTGCCTAGTGATGCGGACCCCGTACCGAGCAATCGAAGGATCGCAGGTGACCCCCGGAGCCGCGAGGCCGGCGAAGGAGTCGTGGTCCATTGCCGCTCGTCGACGCCGCTACAGGAACTCGGCGGAACGGGCTCTAGGTGGGGAGTGAAGGCAAAAGGTTTCAGATAGATTACAATGCCGTTGGGGTCTCAAGGATTGCCAAGT # Right flank : CGAGCCAGAGCACGAGCGACACCTTAGCGGCCCGGACGCCTGGACTCATATATGGATGCGTGGTGGTCAACTGACGGCAGCCATGTCAATGACCAGGTTGACCTCCAGCGCACGAACGATGCGCCGGAGCATGAGAACTGAAATAACCCGGCCGCCGTTCTCGACGGCGAAGATGACTGACTGCCAGGAGCCTATGCAGTCGACCAACTCGGCCTGGGTCAGTCCGGCGCGCAAGCCGTGTGGACGCACCCGGCGAGCTGGAGGCGGATCCCCTCTTCGGCCTGGGTAACGTCAGAACAGGCCCGTTCGTCGGGACACGGCAGCCAGAGCCCCGAACTCGACCAGCCCCTGAGCAGTATCACCCTCATAATCACTCCGCCTCCCCTCTAGCTTACTTTTCCCTCGCCCTGCCGCCTGGGCCGTCGGCTCGACCCCACCTGGGCTCGGCGGTGAAGCCGGGTCCAGCGACACCGGATCCGTCGGCGAGCTCGATGAGGCTG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCACCCCGCGTATGCGGGGATGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGAATGCGGGGATGATCC with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [36.7-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //