Array 1 22050-22286 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJCI01000068.1 Microcystis aeruginosa NIES-3804 sequence068, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================= ================================================== ================== 22050 22 87.0 48 ..-...T..A............. TAAAGATTGCCAATTGACCAACCACTCAGCCCTGGTTCCAATCGATTT 22120 23 100.0 48 ....................... AAGACTTGACTTTATATGGTGCTTGCCTTATAATGTGGCAATCGAATG 22191 23 100.0 50 ....................... TATCTCCCAGTGATCACCTTTTTGAATAATTTCGCCGTTCCAATCGGCTG 22264 23 100.0 0 ....................... | ========== ====== ====== ====== ======================= ================================================== ================== 4 23 96.8 49 AATTCCCTATTAGGGATTGAAAC # Left flank : CCTAGACTCGATTTTTCCCAGTTTCTTCAATATTCAAACCAAATTAGCCGACGAAGCCTATAAAAACCAGTCGATCGGCTGTGTGGGCGAGATTCACTATCGTCTTTTGGGAGAGGTGGAACCCTCGCAGATCAAAGCGATTAATGCACTGGCGGATTTTGCCCTCTATGCGGGAGTGGGACGGAAAACCACCATGGGGATGGGGATGACTTGCAGAATTCCTCAGCAGAAAAGATAGCTAGGGTTGGCTGAAAAAGGCCTAGGGTGGGGTCAGGCAGAAAGCAGCAGGCAGGAGTTTCAGGCTTTGTTGCCCTCCTTTTTTTGTATTAGTTTATGTACTATAAAAAGAATAATGCTAGGTTTTTCAAGGTCCCAATCCTATTTTCGCAGCATGAACATCGGATTTTAACAGGTCAAAAGCCTTATTTTAAAAGGGTTTTACCATTATTCAGCCAGCCCTACCCTAGACTTGCCCGCGTTCATGAAATCCAATCAATCTT # Right flank : CACTCTAAAAATTCAAGGGCATCAGAACCGATTATCGAAAAAATCGGGACCAAGACTTCGCCTTAAGGCGAAAAGTTTTTCGAGCGGGGCATAAATCCCCGTTACAAAAACGGTCTCCTGCCCCTGCCTCCGTTAACCAATAAGGAGTTGTCCTTACCAGTTAGATGCTCAACAGCTGATCTAAAAATCCAACTCGTCTAACCCCGGTTGTGGGGGAGGAAAGCGACTGCGAGGATATTTTTTCGACTTTCTCAAAAAAGCGGGGATAAATGCGGCCATAAAAAATCCAATTCCCAAAGAAAAAGCCAATAAAACACCGATAGGTACTTTAATTGACTCAAATTGTAGAAACTTTAAAGAAACTGGTTGGATATTTTGAATAGCAAAAACTGCCATGGTCATAATCCAGCCGCCGACAATAGCACTAGCTAAAAAATTACTAATTATATTCATGCTTGCCCTCGCCATGTTTGTGGGAGATTTTTGGGGATTCTGTAGGC # Questionable array : NO Score: 8.60 # Score Detail : 1:0, 2:3, 3:3, 4:0.84, 5:0, 6:0.25, 7:-0.09, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AATTCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.22%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.40,-0.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.41 Confidence: HIGH] # Array family : NA // Array 1 17049-14170 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJCI01000020.1 Microcystis aeruginosa NIES-3804 sequence020, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ====================================== ================== 17048 36 100.0 35 .................................... ATTTAATGCGATCGAGTGCCAATTCTCAAAGTGTC 16977 36 100.0 38 .................................... TTGCCATCATCAATCGGACGAATCCCCACCACCTCATA 16903 36 100.0 36 .................................... ATAAAGCTGGTGCTTTTCGGTAAGGGGAAGCGGAAG 16831 36 100.0 34 .................................... TGGAAATGTGGACATCGTTATAAGGGCGGTTTCT 16761 36 100.0 38 .................................... GAGGCTATATTTAGCCTTTTTTCCGAGAGGGATAGGAC 16687 36 100.0 35 .................................... GCCGATGGGATCGAAACCAAAGACCCCAAAGAAAT 16616 36 100.0 33 .................................... ATCTACAAAAGGAAACCTACACTCAAGACAGAT 16547 36 100.0 35 .................................... TCGCAGGAGAGACTTTAAAAACTCAGAACCATTAT 16476 36 100.0 34 .................................... CACTTGATTAAGCTAATCCCGCAGTCCATACGCG 16406 36 100.0 34 .................................... AATCCCCCCGTACTCACAGCGTCCACAACATTCC 16336 36 100.0 34 .................................... TCCCTAGCAAGGCTTAAAATATTTTTTTCAATTT 16266 36 100.0 36 .................................... ATTCCCCTAACTGCTTTAATGTCATCCCGTCTAAGT 16194 36 100.0 37 .................................... AGGCTCAAATTTTTCACCGCGTTGAATTCGCGCTTTC 16121 36 100.0 36 .................................... GCCAGGCGGTACGATTTTGGCTATGGGCAATATCCC 16049 36 100.0 34 .................................... TATCAATACCACTAGCCCACCATCCTTCGCTACT 15979 36 100.0 35 .................................... CGACTAAGAGATTACTGGAGTCGGGAAAAAGCTAT 15908 36 100.0 35 .................................... GCCTTTGGGGAGAAAACGCTAAGGGGGGAGTGTTT 15837 36 100.0 35 .................................... TATCTACGATTGGTCGTTAGGCACAAAAATTAGAA 15766 36 100.0 34 .................................... TATTATGATGAAGCTACCATAACAGGGATTTTGA 15696 36 100.0 34 .................................... TGTACAACTTCGGCAGCCGCTATCTGTTTGTAAG 15626 36 100.0 35 .................................... ATTTAAAGTAGGGCGTGAGCCTACTAAATTCCCCT 15555 36 100.0 34 .................................... GGAAGGCATCAATGAGAGAACGGTGGGTTTCGGC 15485 36 100.0 37 .................................... CTTCCGACCCCTGGACAGAGAAAACCAGAAACGCACG 15412 36 100.0 36 .................................... AACACGCGTAACGCTGATCTTCATCTTTGATATAGT 15340 36 100.0 35 .................................... ATCCCCTCTCCAAGCGTCATTTACCCAATTAGTAT 15269 36 100.0 36 .................................... ATCAAGAAATAGTATTTCCCGTGGTCACGAAAGTTT 15197 36 100.0 34 .................................... GCAAGATGATTATTTTTAGCATTATCTATTTTTG 15127 36 100.0 36 .................................... GAGCCTTTGACTGGTCAGAAAATAGCAGGGGTCTTT 15055 36 100.0 35 .................................... CTCGGCTGCCAAAAAAAGCTTATATTCCCTATCCA 14984 36 100.0 34 .................................... GGAAAAGTTTGTCACAAAACCACTCGGCTAAACC 14914 36 100.0 34 .................................... ACTTTGCTCCCATCAATTCCCGACCCATATTCAG 14844 36 97.2 34 ................A................... AGTCCTATCGGCTATCGATCGCACTTCCCTAAAA 14774 36 100.0 36 .................................... GGTTTTCTTGGCGATTTGTTCTCCCGTTTTGTGGAA 14702 36 100.0 36 .................................... TCTGACTTGATCGCCATTAGATCAATCGGCTTCTCA 14630 36 100.0 36 .................................... TATCCTTAAAGCTTTTCGGCATTTTGTAGGACTTAC 14558 36 100.0 37 .................................... AGAAAAGAGCTATCTGTGCCGAATAAATTCGATTGAT 14485 36 100.0 34 .................................... ATTTATCAACTTTTGTAGTTGAAGTTCACGAGTT 14415 36 100.0 34 .................................... CACCTGACTGGATAGGAGTCGTCATCAACTTACT 14345 36 100.0 34 .................................... AATCATTCTTTTAAATCCAATTCAGTAAACTTGC 14275 36 100.0 34 .................................... CCCATAGGCGATTACAAGCCGCGATAATATCTTC 14205 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ====================================== ================== 41 36 99.9 35 GTGATCAACGCCTTACGGCATCAAAGGTTAGTACAC # Left flank : GACTTCAACAAATCGCTGACTCCGATTGAATTAGCGGGATAGGTCAATAGTTCGCTAGTAGATAAGCCGCCGTCGATATCGGCAGTAAAACCGTAAAGTTTCTGATTGGAAAAGGAGCTATTGACTGCCCAACCCTCGCTATTTAGGGGAGTTAATCGGGTCACTGCCGTCGCTTCAATTCCCAATTCTCGTTTTAGAGTCATCAACGCCGCCTCGTGATGGTCTTGCCCCTCAGAAATCCGACCACCAGGGAAATCAAGGGTTATTTGTCCCAGTCCGGGGCGATAACTGGGAGCGGGCAGCAGTATCATCGAGTTTTGAACGGGCAGAACGATGACGGAATCAGCTTTTTCAACCCGCCAATACTCTAATAGTTGTCCTCGATCATCTTGCAGGTGTTCCCCGATCAGGGTCAACCAGCGACAACGGAATTCTAAAAAGCGATCATTTACTGGCCATGATCTTTCCATTTTTGTCTATCTTAAAGCTTAAATATCCGA # Right flank : GGCGGAACTGAAAAAGCCGTTGACATAAGGCTTTGTAGAGCATTTTACAAGCACTTTTGAAAAAATGCTAAGAAATTGCGAGACCAGCACTTGTGAATGGGTACACCGAAAGCGAAAACCATTATACGGTGGGACTTTCGGAAAATGCAAGCGGGAATTGTCTCTAGTCAAACCCCAAAACCTAGACAGCATATATAATACAGACAAATTGTAGCCCGTGGATTCTTTCCCACTCACAGGTGCTTGTTTTTAAATTACCCGAAACCCTTTTTCGTCCAAAAGCCATGTGTCAGGTCGGTTGTACTTAGGCAGATCGCGCACACACTGCTCCGACAGACGAATTAAAATTAAGTCGTCTTTTGGGGTGAGGACTTTTTCCAATTCCCAGCGCAATTTTTCTCGCATTCGCGCACTTAACCAACAGCGAAAAATCGAGTATTGAATGCGATCACCGTAACCGCCTAAAATTCTGTAAGCTTTACGCCAGCGTTGCGGACAAC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGATCAACGCCTTACGGCATCAAAGGTTAGTACAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.80,-4.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.41 Confidence: LOW] # Array family : NA // Array 2 39364-43406 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJCI01000020.1 Microcystis aeruginosa NIES-3804 sequence020, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ====================================================== ================== 39364 35 97.1 43 .C................................. TCTGCTGGAGAAGGGGTGTGTAGCCAACGGAGGCGAAGTTATC A [39369] 39443 35 100.0 35 ................................... CTTGGAATGTGATCTCACAAACCAATAAGGTGTTT 39513 35 100.0 34 ................................... TTTTCAAAAATCCAATCGAACAAAAATGAAAATT 39582 35 100.0 36 ................................... AAAATTCATCGCCAGCGCAGTAGTGCTCGTCCATTT 39653 35 100.0 43 ................................... AAGGATTAGTAGTAGAAACACGCGACGATTTCGACGAAAGAAG 39731 35 100.0 37 ................................... AACTTGGATATTAACTTGGATCTTTTCGTTCCTGTTC 39803 35 100.0 36 ................................... TTACAAGCCCCCCTCGCAAGAGGCGGCGGATTTCGA 39874 35 100.0 39 ................................... GCTCCAAGCCAAAGGTTTTAACACCAGCCATTACAGAAG 39948 35 100.0 36 ................................... AGGCACAGAACTACAATTACCCTCACAAGAGCAATT 40019 35 100.0 38 ................................... AAAAATTGGTAATATGATGCTGCGGCGTCAGAATTACC 40092 35 100.0 36 ................................... TAGAAGGCTTAGGGAGCCAAATGTATATCCTTGGGG 40163 35 100.0 38 ................................... GTGACGGCCGATGAAGACGATCCCGTGGCTTTCCAGAT 40236 35 100.0 43 ................................... ACGGGCAGCGGTTTAAGTCCGGGGAGAAGAACCTACCAGCAAG 40314 35 100.0 40 ................................... AACGATACCGATACTTGGCATACACCTTTAGCCATTTTAA 40389 35 100.0 37 ................................... ATATTATGATGGCCAACCTTCCTCCTAATACTATGGG 40461 35 100.0 54 ................................... ATGGCTGGAAGGAGCCATCTCCGCCGTCGGAGGCCTGCTTATCAATGAAGAAAC 40550 35 100.0 34 ................................... ATACTGTTGCCAAGTTCGGTAATGTAGGATTTCT 40619 35 100.0 38 ................................... AAGGAAACAATATACTGGCCATCTACCTAGATGTCTCG 40692 35 100.0 33 ................................... GAATACGTTCAAGGTAACTGGTGTGCAGTTGAC 40760 35 100.0 37 ................................... AAAGATACACATATCATGATCTTTCTAACAAACTCAC 40832 35 100.0 40 ................................... ATTGATGGCATTTTGGCTCGAGCGAAAGCCGATCCCCAGC 40907 35 100.0 37 ................................... CAGGCGATGAGTGGGAGGACCTGGGGCTTAATGCTTC 40979 35 100.0 41 ................................... TTGGGACCGTGGAACTTCCGTGCGAGCTTTTACCGGTTTTT 41055 35 100.0 35 ................................... GCGCCCAGGCGCGCAGAAAAACAAACCAGCCGATA 41125 35 100.0 37 ................................... CGGACGCTGCTGATCACAGGGATTTTTCTGGTCCGTT 41197 35 100.0 38 ................................... CAAGCCGCAAAACTCTGCAATCCTTAAAAAGAAAAACC 41270 35 100.0 33 ................................... ACTGAAAAAATGTTAAAATTCAAGGGTGAGTGG 41338 35 100.0 40 ................................... CTGTTGTCCCACCCGCATACGCATGCGGCCCTAACGAAAC 41413 35 100.0 39 ................................... TGGCTGGTTTGGCATTTGTCCTAACTTAATTGGAGACTT 41487 35 100.0 42 ................................... AAAATGATAAAATCAAGGCTAAGGGCAAGCCCGAGCCCAAGC 41564 35 100.0 43 ................................... CTTCTCCCAGAATGAAGCTCCCAACTACTGGGAGTTGGTTATT 41642 35 100.0 38 ................................... AAAAGTTACACGATCGCCTCTTGGCGATGTCCCCTGAA 41715 35 100.0 36 ................................... AAGAAGTTTGAACTGGCAAAGCGATTGAAAGACCAG 41786 35 100.0 33 ................................... TCGCAGACCTGCAACATCCCCAAAAAAATTCAA 41854 35 100.0 33 ................................... CACGCCGCTTTGGGGGCAAGAATCAAATTTTTT 41922 35 100.0 37 ................................... AAAGAGGTTTATGATTTCCTCCGTTCTGTGTCTCAAC 41994 35 100.0 37 ................................... GCTTTAAAATGGTTCTTACAGAATGCCCTTGAAAAAG 42066 35 100.0 37 ................................... GCGCCTGACTACGGCCCGCAATTCAGCGGTTCGTAAC 42138 35 100.0 37 ................................... TCATCATGATGGTTGGTGCAGCCATAATTGGCGTCAC 42210 35 100.0 37 ................................... AGAGCCATTAAAAGCGTTTGTCACATTTCTCTACTTG 42282 35 100.0 42 ................................... AACTGGGTGCGGATTTCCTCCGTAACGATACCCGCCTTGCGG 42359 35 100.0 36 ................................... GAAAGATAAATTTCTCACAAAGCGCATACTATTTTT 42430 35 100.0 37 ................................... GATTCTCAAAACCGCAACTCCTTCTCCTTCTGGCCCA 42502 35 100.0 37 ................................... GCCTAATGTCCATAGCCATGAGGCCAGATGGTCGACC 42574 35 100.0 38 ................................... GATTACACACGCCAAAGCCTACAAAAGCCCAACTACTG 42647 35 100.0 34 ................................... AAACAAGGCCCAAGGGCCCCAAGGGAAAGGTAGG 42716 35 100.0 40 ................................... ATACTCACTGGGAACGAGCATCTCTACTTTACAAAAGCGC 42791 35 100.0 36 ................................... AGAGTTTCAAACTGCGTTAACTGATGGTGGTATCAA 42862 35 100.0 41 ................................... CATTTTGCGTTCGGCGGTAGGGAGTGATCGTGGGTTCCTTG 42938 35 100.0 33 ................................... TCTGTATGCACTAAATGATCAATCGAATTTATG 43006 35 100.0 35 ................................... AATGCTTTAACATTCCTTCTCCTTCCCCCGCCCCC 43076 35 100.0 43 ................................... TTTCCTCGAGAAAGGAGAGAGTCTTTCGGACTCAGAGCAACAC 43154 35 100.0 36 ................................... GTTCGATGTGGAAAGCTTAAATTTCCTTAAACAACT 43225 35 100.0 41 ................................... TTTAATGGGCCTTTCGACCAGGCCCCACTCACCAGCAATCT 43301 35 100.0 36 ................................... TTTGGTATTATTGTGGATGGCCTGCACCCTTGTGGT 43372 35 100.0 0 ................................... | ========== ====== ====== ====== =================================== ====================================================== ================== 56 35 99.9 38 GTTTCCATTAATTAAACTTGCTAAGAAGTTAAAAG # Left flank : GAATGACTGAAAAAGTTACCCATTCTCAAATTTCATCTCAGATTTCTTACCGAGAAGCCATTCAATTACAAATTCGGCTGTATAAACGTAGCTTGCTGTCATCTATAGCCTATGAACCTTTCTTTCGAGCCTCCTAATGTTAGTATTAATTGTTTACGATATTCCTGACAATAAAAGACGCACTAAATTATCTAACTTTCTGGAAGGATACGGTAAAAGAGTACAGTTTTCTGTGTTTGAGTGCTTTTTATCTTTAGCGGAAATGCGAGAACTTTATGAAAAAGTCAAAAAAAAAGTTAAACCAGAAGAAGATAATGTTAGATTTTATTGGCTCTCAAAAGATGCTACCTCAAAAACTTTAACTATCGGTAGCAAACACCCTGAACCCCCTCCACAATATTATGTAATCTAGAAAAAACAAAATCTTATCTCTCACCTTTATTAGTAAAAAAATCTCCTTAGAAAATTAAAGTAGGAGATTTTTTATTCACTAATCGTTA # Right flank : GACTAGCTTGGCAAAACTAGGCTGTATAAGGATTGTACAGCAATTTTTCGTGGGATATTGAAAAGCATAGACATTATTAATAATAATTCTCAATAGTTACCTCAGTCATAAGGCTCAAAGCCTTGCTGGGCAAAGCATCGACGCACCTCAACGAAAACTGTAGATTTTCAGCCATTGTGTCTAACCCGCGAAAAATGTTGAGAAACCCCCCATTCCATCGGCATAAAACAATAGAATTTGTTCCACGCTAATGCCTATGCGATCGGGAGCATCTCACCTTTATAACCCCTAAATCTTTATGTCAAGCTATTTTGAAAGCCTTACTGGAAAACAGTTTTAGGACAAGTATAATTACTCACTTGCATAAATGAGATGCTTCCTATGCGATTCCAGCTTTAGCTTATCTAGTGTGCAAAGCTAGTTTTTGAATATCTTTTTGTCAACTTCAACCCTTAAAGTATATCTTATATTAATTTATGTCCACTTTATATATAGTAGAA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:-0.00, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCCATTAATTAAACTTGCTAAGAAGTTAAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:74.29%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.40,-0.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0.41 Confidence: LOW] # Array family : NA // Array 3 62587-58940 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJCI01000020.1 Microcystis aeruginosa NIES-3804 sequence020, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ============================================ ================== 62586 35 100.0 42 ................................... TGCTGTATCTTTTGCTTTCGCTTTAGCTTTCGCTTTCGCTTT 62509 35 100.0 38 ................................... TGCCCAAAAGATACATGGCAAGAAAGAGCCAGAAGGTC 62436 35 100.0 37 ................................... TATAGCTGTAATCTACAGCACCAACAGAGACAGAATG 62364 35 100.0 40 ................................... AACTCAGCGGGGACAGCTGTAACGGTTTTGATGTCCATGT 62289 35 100.0 34 ................................... GCGTCTAGAATTTTGTTCGGCTCTTCTAGCTCTC 62220 35 100.0 37 ................................... CGATACGAAAGCTTCAAGAGAAGTCCAATTACAGTTG 62148 35 100.0 38 ................................... AGTTGCTCGAGTTGAGCTTTTTCTTGAGCTTTTTCAAT 62075 35 100.0 33 ................................... ATACCAGAAGAAAAAGATACAAAAGGGCTAATT 62007 35 100.0 35 ................................... CAAGTTTGCTTCTGATAAGTAACTCTATGGGCGGG 61937 35 100.0 36 ................................... TCTTTTTCTCTTCCTTCACATGAATCTTTCGATTTT 61866 35 100.0 36 ................................... GCAATTGCCCCAATCTCCCGAGCAAGGGGATGGAGA 61795 35 100.0 39 ................................... TTTCTACATCTTTTTCAATTAAGAAAAGGATGTATGTTT 61721 35 100.0 37 ................................... GGCGGCGGTGGGCTGAGACCAGCCGGTAAATAATCCA 61649 35 100.0 33 ................................... TTGGATCTTCTTGCCGTCCATTTGTCAGCAAGA 61581 35 100.0 33 ................................... ATCAATCCACATCTCCACAGGCGAACCCGCAGA 61513 35 100.0 39 ................................... GATACGACATAGACGGCATTCTCCAAGAGAATTTCACGG 61439 35 100.0 44 ................................... GCTTTACCGCCGCACGCGCCATCTCAATCATCTGCATCTGAATA 61360 35 100.0 38 ................................... GATTAATTAACCGTGCATTTTGCACGGCAATCAGTCCT 61287 35 100.0 36 ................................... TTGATTTCGGTTAGCTTGTAATTTTTTTTGCCCAAG 61216 35 100.0 34 ................................... GCTAAGCCTATCAGCATCCCCAGCCACCTCGGTA 61147 35 100.0 37 ................................... CATATTTAAGCTGTCTAGGCGTGTAAAAACAACTGAC 61075 35 100.0 40 ................................... CTGTTGGCGTTTTGGTGGGTAGTTTTTTCATTTTGAAAGA 61000 35 100.0 37 ................................... GAATCAAGACGAAACTCGTGAGCGTATTGCCACGCTA 60928 35 100.0 36 ................................... TCCAGCACAACCACACAAACAACAAAACCAAATAAT 60857 35 100.0 37 ................................... TGCCATTGGCCCGAAAGCTTGTACAACTGCTTCATCC 60785 35 100.0 42 ................................... GACCGGATGTGGTACAGTGCCCCTTCATCTCAAATCGAAGAG 60708 35 100.0 39 ................................... CATTGGAATGCTTGAGTTTTTGTGTGTAACTGCAATCAT 60634 35 100.0 40 ................................... TTTAAATATTGGTAACGACCCGTTACCCAAATTCCGTATC 60559 35 100.0 38 ................................... TTTTTACATATTATAGACGTCATAGGGATTTCCTGCGA 60486 35 100.0 36 ................................... CGTGATCCTCCGACCAAGAGAGCCGATATTTCTCGT 60415 35 100.0 34 ................................... CTTTAACGGCGGGGAAGTACAGTTGGAGACCCTT 60346 35 100.0 37 ................................... GGGGGACGGGGTACGGACACTCTTTCTCTGGTATCTG 60274 35 100.0 38 ................................... TGAAGGAGAATTGCCTGCATGGGCGGCTCCATTCAAGA 60201 35 100.0 33 ................................... AGGGACTTTACTGCCTATTAGAAAGAGGGAGAG 60133 35 100.0 39 ................................... GAAAGGGCGTTTCCGCGGGGCTTAAAGGTGTTGTTCCCA 60059 35 100.0 37 ................................... GGAAAAAAGGCCACGGATGATTTCAAGTGTACCCGTA 59987 35 100.0 40 ................................... GGATTGCCGTGTACTTGCCATCGGGGCTTTCCACAAGACC 59912 35 100.0 33 ................................... TTTGCATTCTTCTCAATAGCCCAGAAATCACTT 59844 35 100.0 38 ................................... GCTAGTAAGCCGTGCAAACCAATTGTTCTTAACAAAAC 59771 35 100.0 35 ................................... AGCGGGTGGAGCGATGGGAGGCTCTTCTTTTGCGC 59701 35 100.0 38 ................................... GCATCGTCAAGAAGTGCGAGAGCAACAGTACAACGTTC 59628 35 100.0 41 ................................... CAAAAAGCTTCTGTCCGACCAGAGGATCGATGCCTTCCCAA 59552 35 100.0 35 ................................... TTAGGGCGGCGCGAGCTGTGGTGCTGGAACCGGAT 59482 35 100.0 35 ................................... GGCACGTAACGGCAAAGCCATTACGAAATATAATA 59412 35 100.0 39 ................................... CTCCCACAGTGGGGTAGCCACCTTTGCCTCTTTGGCAGA 59338 35 100.0 33 ................................... AGTTAACGTCATCGTATCCACGGAATCGTATGT 59270 35 100.0 36 ................................... TATGAAATAGAAGAAATAGTCAGGTTTATACCCTGC 59199 35 100.0 38 ................................... CCCTTCTCCCCGCTCTCCTCTAGATCATAGACTACTGA 59126 35 97.1 39 ..........T........................ TGGGTTCAAATCTACCACGCGGTAGACTTTAAGAGGCTG 59052 35 100.0 43 ................................... CAACGTACCGACGGAGTCGGGATCGGGTCGGAGGTAGCACAGG 58974 35 100.0 0 ................................... | ========== ====== ====== ====== =================================== ============================================ ================== 51 35 99.9 37 CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC # Left flank : ATTATGATGATTATCTTGAAAAAAAATGATAATTAGACAGAAGTTCTCTTGTTCACATAGAGAACTTTATCTTCTTTTGTTTTCAAAATGAGAATTGCTGAGGTAAAGCAACTAAAATATCGGGAGCATCTCATTTATGCAAGTGAGTAATTATACTTGTCCTAACACTGTTTTCTAGCAAGGCTTTCAAAATAGCTTGACGTAAAGATTTAAGGGTTATAAAGGTGAGATGCTCCCGATCGCATAGGCATTAACGTGGAACAAATTCTATTGTTTTATGCCGATGGAATGGGGGGTTTCTCAACATTTTTCGCGGGTTAAACACAATGCCTGAAAATCTAGAGTTTTCGTTGAGGTGCGTCGATGCCTTGCCCAGCAAGGCTTTGAGCTTTATGACTGAGGTAACTATTGCGAATCATTATTAATAATGTCTATGCTTTTCAATATCCCACGAAAAATTGCTGTACAATCCTTGTACAGCCTAGTTTTGCCAAGCTAGT # Right flank : GAGACGAGCTTTAAGCTCAGGAGTAGGTCAACGATGTGTAGGGTTAATTAATGAATTAACCCTACAATTTTGCGGAATGTGGGTGGGAATTCCTATAACGGCAAAAAACGGACTAATTCAGAGCCACATTCTGGTACGATCGCCGTAAGTATGAAAAAGTTCGGCGGTGATGCAAACACCCCGAACGCGGCAAACCTGAATAGGAGGTTCACATTGAGTAATAGTAGCAAGCTAAGTTTAGTTTTAGCTGAAGTTGATTCTGTCCAATTTTTTACCGACGCAGCCACTGGACGTTCGGGGATCAGTCAATCGGGTCTAGCTGCCTTGTGTGGAGTAACCAAGCAAGCCCTCTCAAAGCTGACCAAATCGTTGTCAACCAAATGCCCTTCAATCTGGTTGAAACCCATACAGGGTCAGGTTGATGACCTGTCAACCAGAACTGAAACTGGGATTTTGCTCTACTACGACCAATTAGCCCTTGCCATCATCAAACATTACGC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:74.29%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.40,-0.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.41 Confidence: LOW] # Array family : NA //