Array 1 40652-39396 **** Predicted by CRISPRDetect 2.4 *** >NZ_FJCG01000006.1 Legionella pneumophila strain 2531STDY5467344, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================= ================== 40651 36 100.0 36 .................................... AATATCTGGCTCATAATCAACGATTGCAGAAACAAT 40579 36 100.0 37 .................................... ACGCAATACTTCGCGGTATATCTGAAAATACCATCAA 40506 36 100.0 36 .................................... ACGCCGATTCGTATAAAAAAGGCTATCATATTCAAG 40434 36 100.0 37 .................................... ATTTTACATTTCCTTATTTAAATTAAAAATCCATTAA 40361 36 100.0 35 .................................... AGAATAACTTTGTTCATGAATGTGGTGAATGGTGT 40290 36 100.0 39 .................................... ATGTAACTAAATTTGAAACAGGCGTTCCCGCTCTTTTAG 40215 36 100.0 34 .................................... ACTCTCAATTTTACATGTCGTCCAAAAATGTAAA 40145 36 100.0 35 .................................... AAATTTGAAGAGGCGCACCAGATAGGCGAAATGGA 40074 36 100.0 34 .................................... ACTTGTAGACGGCACGATCGAGTATTGGTATGAG 40004 36 100.0 34 .................................... ACTCATATTTCAACCCAGTTCGTCGAATCGTAAG 39934 36 100.0 37 .................................... CTTTTCATAACAATCTCACAATGTAAACCAAACTTTA 39861 36 100.0 35 .................................... CATATCTCGTCAGCTATATGTGACCATTTTTTAGC 39790 36 100.0 36 .................................... CAGTCAAGTGACTTGCTATTTATTAACCTTAATTAA 39718 36 100.0 34 .................................... CTGTTTGTACGGAGATGGTATGTTGGCTTTGGTA 39648 36 100.0 35 .................................... CACTTTTGATGTGTTATTTCAGTGAATTTATCGCT 39577 36 100.0 35 .................................... CCTTTGAGTAGATTTTAAATCAACAACCATGTGAG 39506 36 100.0 39 .................................... CTTAATTGCGCCAGAAACAGCACCATTTATGGTTACAGC 39431 36 88.9 0 .......................TT...T.A..... | ========== ====== ====== ====== ==================================== ======================================= ================== 18 36 99.4 36 CCAATAATCCCTCATCTAAAAATCCAACCACTGAAA # Left flank : TCTTTTGCATCAAAAATTAGTTTAGGTCAAAAGATGCAACTGACCGCCTATGGAATGCTTTCCGAACTGATTTTTGAAAAACCATGTACCCGAGGCTATATTATTACTGGTGAAAAAGCCAAAGCCAAATTAATAAAAATTGACGAAAAATCAAAGTTCAAAGTACTTGAAATTTGTGGTAAAATAAAGAAAATTTTTGGCACAGAAACATTACCATACAGCACTGCTAATGGACTTCAATGCATTCAGTGTGAGTTTCTAAATCACTGTAACGATAGATTTTAAAATCGTTATATGCTCGCTATTAATACGAGCATAGAAAAACGATTCAATCTTTAATTTTGTTGATTTCAGGGTATCGAAATTTAGATGATTTCTAATTTAATTATTGCCTTCTTTTTCGAAAAATCAAGCCTAAATAATGCAATTTGCTATTTTTCGAAGAAAACCACTTTTAATTCCTCGTGTTTCTTTAAAATAAACAAAGAGTTAAAATTGCC # Right flank : TACTCCATACTTTATTCTCTGTATACTATTATAGTAAAAATCCATGGGGTATTATTTTATATAATTAAACAGAATTTAATTTTGTTGTATTTTAATTTCTTCGACAAACATCAGAAAATATAATCGGTCATTTTTACCAATTATTTGTAAATGTTAGATGCAGTTTTAGGGGCACAATAGGTCATATTTGGTTATATTTGCTTTTTTTCATCTTATTTATTTTATAATTAACTTGATAATTATAAAGTGCTATTTTACTCTGTTGCTTTTTCTGACAATACCTGTCTTTACAGATTATCTTTGTAACAAATTTTCTTAATTTAACCTCAGCTCGATATAAGAATAAGGTTATGTGATTGATGATTCAAAAGCCAAACCGCAAGTCAAATTAGTACGCGGTCAACTTCAAATTATTGCATCAAGGAATATAGAACATAGACGGCAGCTGTTGTCAGATTGGTATAAGCAGAAAGCTTTTGAAGTTTTTAGCAAAAGGTTAG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCAATAATCCCTCATCTAAAAATCCAACCACTGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.30,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //