Array 1 95646-96541 **** Predicted by CRISPRDetect 2.4 *** >NZ_MIEK01000002.1 Enterococcus rivorum strain LMG 25899 10, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 95646 36 97.2 30 ......................A............. TTTTCAATACGAGAGTAAGTCGATCTATTT 95712 36 100.0 30 .................................... AATCTTTCTGCTAACATTGTGTATGTTAGA 95778 36 100.0 30 .................................... CAATTAACCAAATGGATCAATACCGCTACT 95844 36 100.0 30 .................................... ATATCGATAAGTCACATGTTTTCCTTCAAG 95910 36 100.0 30 .................................... TGAGCGTGGAACGTCTTAAATCGATTGTTA 95976 36 97.2 30 T................................... CCATTGTAGGTACGTTTGTACGTCCAAGTA 96042 36 100.0 30 .................................... GTAGTCAGCGAAGAATGATTTTATGCTGAT 96108 36 100.0 31 .................................... TAGCAGATGTTCCTTGTGGTTGATTGGTTAG 96175 36 100.0 30 .................................... TAAGTAATACTTCACCAGATGATAAAAAGA 96241 36 100.0 30 .................................... GTATGACTTGATATACCTGCTCATCATAAT 96307 36 100.0 30 .................................... TACGCGTGTTATTTGTGTCTTTTCTGCTAT 96373 36 100.0 30 .................................... TCGTCAATTGATACTTTTGGCTGTCTTACT 96439 36 100.0 31 .................................... CTCAAATCAAAATAAATCGTACTGAATTCCC 96506 36 72.2 0 A.....A..GC......AA..G.....A.T.C.... | ========== ====== ====== ====== ==================================== =============================== ================== 14 36 97.6 30 GTTTGGGAACTATTCAATTTAACATGACTCTAAAAC # Left flank : TAACCACGATATCCCGAGGCAATTGATGATTAAAAACATCCCCTATCTCGGTTAAACTTATGGTGCTATTGGTTTTGAAATTAGCAATCTGTCCTCTAGCATGTGTTCCCGCATCCGTTCGACCAGAACCCACGATTTCAGTAGTTGTTCCTAACAGCTTTGTCAGGATTGCTTCGATTTTTCCTTGTATCGTTTTATCAGAATTTCCCAGTCGTTGCCAACCTAGATATCTCCCACCATCATATTCGATGGTTAGTTTTATATTTCTCATCTGTTTGATTCACGCTCCGATTCTCTCTGTTATTCATTCAATAACTTGCTCCGATTTTCTAAAAAATAGATCTTCGTCTCATGACACTTATCATAGCACATCGTTGCTATTTCTTTTATAGATAATGTTGGAAAATCATTTTCGATATAACAAAAAACTGTATCCAAAATTTAGAATACAGTTTTTTAAGACTAATACTTTTATTCGCAACAATAACGAAACTAACTAA # Right flank : CCCATTCAGGTGACTAGCCCTTCAATTTCAAATGCTATTCTTTTTATTTGACACTGCATGTTATCTCTTATTTTTTGAAATTATAGCATAATGTGGCTCAAAAAGAAATCGCTATCTAAGTAGTAATGTGGTATATTTTCTAAAATATATTGACTACTTTCAATAATTAGAACTGTTTGATTGTTCAAATCAATTTGCTCCATTATATATTTATATTCTTGGTTTGTTAATAAAATATTTAAGTGCGTGAAAATCAGTAACTTTTCTCCAGCTAAATCATTTAACGTATTAATTAGCAACTGTATTTTTTCAAAAATACTTGTTTGCATTTTCTGGTCAATCGATAACCCAATCATTTTAAACAGCTCTTTGTAATTTAATTCATCTTTATACATTAAATCCAAATCATTATTTTCATCAATTACTTGGATCAATTTATAAATCATATTACGATAATCATGCTCTATTTCGTGTTTTTTATCAATTTCATAACCAATTTG # Questionable array : NO Score: 3.14 # Score Detail : 1:0, 2:0, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGGGAACTATTCAATTTAACATGACTCTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.50] Score: 0/0.37 # Array degeneracy analysis prediction: F [1-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0 Confidence: HIGH] # Array family : NA // Array 1 11797-10475 **** Predicted by CRISPRDetect 2.4 *** >NZ_MIEK01000028.1 Enterococcus rivorum strain LMG 25899 34, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ====================================== ================== 11796 33 100.0 34 ................................. CCACAAGTCGCCTCTGGGGCTATCTGCGTCTAGG 11729 33 100.0 34 ................................. CCATTTCTCGGGAGCATGTTCAGGGAGGTTTCTT 11662 33 100.0 35 ................................. TATAACAGCTTTGTGTTTGTCCACGAATAATTTTA 11594 33 100.0 36 ................................. ATTTCTAGTTCGGGTTTCATTTTTCCCCTCCTTAAT 11525 33 100.0 34 ................................. CCCTCACACGTATATATGACGTGTACAGGCAGGC 11458 33 100.0 33 ................................. ATTCCAAGTGTCTGAAGGTTTTTTTAATACTTT 11392 33 100.0 37 ................................. GTCAGCTCTAGCTTCGTCTACTAGAGCTGGGCTAGGG 11322 33 100.0 36 ................................. TCACTAGCTTTTATGATTTGTTCTTTCATCCACTCT 11253 33 100.0 35 ................................. TGCTTCGATAACGTCAGTTGAGCCGTCATTATGTT 11185 33 100.0 34 ................................. ACCTACAACAAGCTCTACGATTTAATGTATCAAT 11118 33 100.0 34 ................................. ATACTCTGGCGGTGCTGTGTCGTCTCTGACAGTG 11051 33 100.0 35 ................................. AGATTGTGAGCGTCTTAAATAAGTAAATTGTTCTT 10983 33 100.0 33 ................................. TCAACGTATTCCTGTATTGTGTTGTAAAAAATA 10917 33 97.0 34 ......................T.......... TATCAACAAGCAATTGTTTTTTGACTATAATCGT 10850 33 100.0 34 ................................. TAAATGGGATACTCTTTTTTCTAGTTCTGCGTAT 10783 33 100.0 38 ................................. ATCTATGCGTTACTATTTAAATATACTTAATTCACCAT 10712 33 100.0 38 ................................. TTGGCATGAGTCTACAAGCAAATACGAATGCAAACAAA 10641 33 97.0 34 ......................T.......... TACTATTTGAAAATCTGTAGAATAAAAATCTAGG 10574 33 97.0 34 ......................T.......... TTATTATACGGTGGAAAGTCAAAAAATTCTTTGA 10507 33 75.8 0 ......T...............TAA...ACTT. | ========== ====== ====== ====== ================================= ====================================== ================== 20 33 98.3 35 GTCTAGCTCTGTTTAGAGCTAGGGGATTGAAAT # Left flank : GTCCACCCAAGTGGGAAGCCATTTTTTAACAAAAGTGAAGTAGATTTACAGAATGCAAAGAAAAAAGTTTATTTAGAAACTAATTTTAGTCAAGATTATGGCGATCGCATTGCTATGAGAATGGTCAAAAAGACAGAAGAGTTAGGAAAAAGAAGAGAATCTAGCCGAATTAAGCAGGAGATTAGCCAGTTAGGGAAGGAACAAATGGGCGCGAAACCGATTGCTAAATCATTGGAAACCATGATAAAATGAAATAGAAAGAGCTTTTCAGATTGAAGATTTGTTGAAAAAGGGTCAAGAGATTTTTAAGTATGAAATAAGTAGAATGAATCTAGAAAAATAAGTGCGAACCCCAAGTGCCCATAAAATCCCCAGGAGATTCGCACCAAAAATTCAAGAGAAACGATGGGAAAACAGTCTGTTTTCTCATTAAAATCTAATTTATTGATAATCAAAATGATAAAAAAGGAAAAAGGTTAAGGAAATAGACCTTTTTCACT # Right flank : CTATATTTCCAATACCTATTGAATATAGCTAGTACTTAGAATACAGAAAAAATGTTTAAAAATGATTGGAGATTGAATTCTTCATCTCTAGATTAAAAAAAATTTATTAGATATATCTATTGATTTTGAAGAATAATGATAGGATAAAGGTGTTTAAAAAAATCAATGAAATGTTAAGAGGAAAATCAAATAATAAATGACGAAGGGATAGTATTAGCGAAAAAGCTTGATGCTGTTCTGTTTTTTTAGTTACCCAAGACAGATGCGTTGCTATATTTATAAAAAATAAAATGTTATTAATGTAAAAAATTCAGAAAAGATGTTGTTTAAAAAAGGCCGATTGGCTTTAGTCTAGGTACTCTTAATTTAAAGTGATTTTTTACAAATTTTAAATAAATATTATTTTAAGTAAAAAAAGAAAATAAATAATTTTATAATTAACGTTGTGCATCTATGTAATTATTGATATGATTAAATCAGAATCATTTTCAATGTTACAT # Questionable array : NO Score: 9.17 # Score Detail : 1:0, 2:3, 3:3, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTAGCTCTGTTTAGAGCTAGGGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.58%AT] # Reference repeat match prediction: R [matched GTCTAGCTCTGTTTAGAGCTAGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-5.70,-5.70] Score: 0/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.41 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 1867-553 **** Predicted by CRISPRDetect 2.4 *** >NZ_MIEK01000046.1 Enterococcus rivorum strain LMG 25899 50, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 1866 33 100.0 34 ................................. TTTGCTGAATAATGATGATATTCAATACCTAGTC 1799 33 100.0 35 ................................. CTCTCTAGTGTACTTATAAGATGTTGCAGCGTTTT 1731 33 100.0 35 ................................. TATTTTTGGGGGATTTGCCAATCGATGATAACCAT 1663 33 100.0 35 ................................. ATCCCAAATATATGAAGCAAATTCTTGGAATAAGT 1595 33 100.0 34 ................................. ATCTAGGATTGCCCGCCAATGCCTGCAAAAAACA 1528 33 100.0 33 ................................. TATCCCTAAATTAAACATACTATTACCTGTTTT 1462 33 100.0 34 ................................. GTATTCCTCACGCTTTCTTTCCGGAGATTGTGGA 1395 33 100.0 35 ................................. TCTATTAATCCTGCTGGTTGGCAAATAGGTGATTT 1327 33 100.0 34 ................................. AATGTAATGTCAGTCGTTTTATAGTAAGCATCTT 1260 33 100.0 34 ................................. CTTTACAAAAAGATGCTCTCTATCTTATATTTAT 1193 33 100.0 33 ................................. TTACCTAGATTTTCTAGTCCCTCAAATTAGTAT 1127 33 100.0 34 ................................. ATTTCATTTCCCTCCACGCTACGCTGCCGACAAT 1060 33 100.0 34 ................................. AAAAACTTCTATTAAAAGAAGCTGAATCTCATTT 993 33 100.0 36 ................................. AAATTGACGATGAAAAGAAACAGAAAGATATCGATG 924 33 100.0 33 ................................. GAGTAATACTTAATAGAATGTTTTTTTAGTATT 858 33 100.0 35 ................................. TTGGATGCGCTTGGAAACATGGCCAACGATAAAGA 790 33 100.0 36 ................................. CATTCATCGCCGCCGACAAGCTCTTCTTTAGATTTG 721 33 100.0 36 ................................. ACAAAAACAACAAAAACCTAAATTAAATAAGAGTCG 652 33 100.0 34 ................................. ATACTCAATAGCAAGAGGGAAAAGTACAATTTTT 585 33 81.8 0 .......................AA...ACTT. | ========== ====== ====== ====== ================================= ==================================== ================== 20 33 99.1 34 GTCTAGCTCTGTTTAGAGCTAGTGGATTGAAAT # Left flank : ATGGATATCCACCTTTTTTATGGAAGTAGGTGAGTGTTATTCTAGTTTTAATTACCTATGATGTGGCGACAAGTTCTGAAAATGGAACAAAACGATTAAGAAAAGTAGCAAAAAAATGTCAAGATTACGGTCAAAGAGTGCAAAATTCTGTTTTTGAATGTATAGTAGACGCAACCGAGTTAACAAAATTGAAAAAAGAATTAATTGATTTAATTGATGAAGAACAAGATAGTTTAAGAATTTATCGGTTAGGCAATAACTATCAGAATAAAGTAGAGCATGTTGGAGCGAAAGAAAGCTTTAATGTAGAAGACCCTTTAATATTTTAATATGATTTATTTGGTGCGAACCCTAAGTGCACATAAAATCTCTAGGGGATTCGCACCAGAATTTGAACACTTTTTAAAGAAAAAAGGTCTTTTTTCTCATTTAATTTTAATAGAAAGGTTCTTTTAAAGTGAAAATAGGATAAAAAGTACTTATTTTGAGCTATTTTCACA # Right flank : CTATATTTCCAATACTTATTGAATATAGCTAGTACTTAGAATGCAGAAAAAATGTTTAAAAATGATTGGAGATTGAATTCTTCATCTCTAGATTAAAAAAAATTATTAGATATATCTATTGATTTTGAAGAATAATGATATGATAAAGGTGTTTAAAAAAAACAATGAAATGTTAAGAGGAAAATCAAATAATAAATGACGAAGGGATAGTATTAGCTAAAAAGGTTGATGCTGTTCCGTTTTTTTCAGTTACCCAAGACAGACACATTGATTTATTTATAAAAAGTAAAATGGTATCAAAGTAAAAAATTCAGAAAAGATGTTTTGAAAAAAGGCAGATTGGCTTTAGTCTAGGTACTCTTGATTTAAAGTGATCTTTTACAAATTTTTAATAAATATTATTTTAAATAAAAAAATATAATAAATAATTTTATAATTAACGTTGTGCATCTATGTAATTATTGATATGATTAAATCAGAATCATTTTCAATGTTACATA # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTAGCTCTGTTTAGAGCTAGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.61%AT] # Reference repeat match prediction: R [matched GTCTAGCTCTGTTTAGAGCTAGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-5.70,-5.70] Score: 0/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.41 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 1761-2116 **** Predicted by CRISPRDetect 2.4 *** >NZ_MIEK01000050.1 Enterococcus rivorum strain LMG 25899 54, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ===================================== ================== 1761 29 100.0 37 ............................. ATTATCTCTAACGAGTAAAACTCGTAAGAATAAATGG 1827 29 100.0 37 ............................. ATTATCTCTAACGAGTAAAACTCGTAAGAATAAATGG 1893 29 100.0 36 ............................. CCTATTTCTACGTCGCTTCGCTTCCTAGAATAGCGG 1958 29 96.6 36 ..............T.............. CCTATTTCTACGTCGCTTCGCTTCCTAGAATAGCGG 2023 29 93.1 35 ..............T..........A... TCTATTTCTAACTCACTTTGTTCGAAGGATAGTGG 2087 29 89.7 0 T.............T...C.......... | A [2090] ========== ====== ====== ====== ============================= ===================================== ================== 6 29 96.6 36 CTCTCCTTTTACCTATTGGTCCGATGTCC # Left flank : GGTAAAGATAATTACAGGCAGACGTTTTTCTATAGCACGTTCAAATAGGCGAGTAATTTTCTCTCCAACAACCGTTCCCATACTACCCATGATAAAATTAGCATCCATTACACCAATGGCAATCGCTTGTCCATCAATCGCCGCTTTCCCCGTCAAAACGGCTTCATGAAGTTCAGTTTTCGCTTGCATTTGTTTGATTTTATCTAAATAGCCTGGAAACTCTAATGGATCTTCCGTCTCTGTATCTGTATCCCATTCCTTAAAACTTTTTTCATCAATAGTTAGTGATAAGCGCTCCCAAGCTCCAATCCGAAAACTATACTCGCAATAAGGGCAAACTTTTTCTATTCCCATGTCCTTAGTGTATAATGTTCGTTTACAACAAGGACACTTCGCCCACATATTATCTGGAACAGCCGGCTTTTTTTGAGAAGATAGGTCAGTTTCACGATTTGGATTGATTCGAATATAATTTTTCTTTTTAAATAAAGCCATGGTTA # Right flank : CTCTATTCCTATCTCACTTTGTTTCCTAGAATAGGGGATTTCTTTTACTCTGTTTTTTATATTCTCGATTTTTTTATTAGAAAGTTACTAATTGTTAGTTTTCGTTGGCTGGTTCCCACTCAGGTAAAAATGTTTCTTGCAAGAAGCTTGTATCATAATCCCCTGACAAAACATTCTTATGAGCAATTAAATCCAATTGGAACTCTGCATTTGTAATGATTCCTTCGGTTACAATTTCGTTCAATGCCCGTTGCATTTTCATTAAAGCATCAAAACGATCGACTCCATGAACAATCACTTTTGCAATCATAGAATCATAATAAGGTGGAATCGTATAGCCAGAATACATGGCGCTATCAACACGCAATCCCATACCACCACTTGGCAACAATAAATTTTTTATTTTCCCAGGAGATGGAGCAAAATTGAACGCTGGGTTTTCAGCATTTATACGACATTCAATCGCATGTCCTTTAATGCAGATATCTTTTTGTTCGTAA # Questionable array : NO Score: 2.69 # Score Detail : 1:0, 2:0, 3:0, 4:0.83, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCTCCTTTTACCTATTGGTCCGATGTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.72%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-2.00,-2.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 1 3805-3445 **** Predicted by CRISPRDetect 2.4 *** >NZ_MIEK01000063.1 Enterococcus rivorum strain LMG 25899 66, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 3804 30 100.0 36 .............................. CTGGCAAAGATGAGTCCAAGTTGAGTTCAGAGGGTG 3738 30 100.0 36 .............................. ATCGTTGCAAGAGGATGTAAACAGACAGCAAGCAAC 3672 30 100.0 36 .............................. AAAGTATCATTGCCAATTGTGACAACTTTATTTTTC 3606 30 100.0 36 .............................. CACGTCCATTACGAGCTACAAAAAGACGGTAAACAT 3540 30 100.0 36 .............................. TTAGTAACAATTGTTAAAGCTTTGCCGGAAAGTCCT 3474 30 93.3 0 ........................T...G. | ========== ====== ====== ====== ============================== ==================================== ================== 6 30 98.9 36 GTTTTAATCTAAGTACTGTGAAATGTAAAT # Left flank : TTTGATAATAATAGTCAAAATCGTCTCTGTTTTCTATAAATAGTAGTTTATTGTCCCACTCTCTTTCTTGTTTCTGTTCAATAGCTCAAAAAATAAGGAATTGCGAGAAAATATACTCTTGTTAGAAACAAGTTGAAGTGCTCAAAAGGATTAGGAAAGAAGGCGTAGGATTTCATCTACTGTATATTGAGGATTACCAATAGAAAATGTGGTGATCCCACTTCTTGAACTATAAGAATTAAGCATTTTTTTACAGTATGTTGATTATTATTTATGATTTTGACTCAATCTAGATGTTTTTTTGTGAAGAAAATGAAATGGAAATCTGTCGAAGTCCAATAGCCCAAAATAATGGGGAGATCGACAGATGCAAAAAAAGCCAGAGAAATAAGTTTTTTTAAGGAATAGGGAATGTTTACTAGTAAAATGGAGTAAAAAAATAGACATCGACAGATTCGGCTTCTGTAAGGTATGATAGAAGTATCTTTTTTGAGGTACCT # Right flank : TTGGACAGCAGAGGAGTTTTCCTTATATATATATTAATTATTTTAGACCATAAAATCTTAAATTTAAAAATTATTTTGGAAATCTCCAATAAATATAATTTTAAATAAAAAAATATAATAAAGAATTTTATACTTAGCATTGTGCACCTATGTAATTATTGATATGATTGAATCAGAATCATTTTCAATGTTACATAGTTTTTATTTTATTATTGGAGGAAAAAGAATGGCACAAATCAAATTATCACCAGAAGAATTAGAAACATCTGCAACAAAATACACGCAAGGGTCAGAAGAAATCTTAACGGTTTTATCAAATCTTGAGAGAGAACAGGATGCTATCCGTTCAAATTGGGAAGGTAGCGGATTTGAAAGCTTTGACAATCAATTTGTAGAATTACAACCGAAGATTCGTGAATTTGGTGAATTGTTAGAACAAATCAACCAACAGCTACGTTCAGTGGCGCAAATTATGCGTGATACGGATAACGATATTTCAC # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAATCTAAGTACTGTGAAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA //