Array 1 38075-39356 **** Predicted by CRISPRDetect 2.4 *** >NZ_LT797683.1 Planktothrix sp. PCC 11201 isolate BBR_PRJEB10991, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================= ================== 38075 37 100.0 34 ..................................... ATGAGTCTGCTTCCTATGTTTTTGAGCAGTTTCC 38146 37 100.0 37 ..................................... TTCAACTTGCTGCTGACTCAACTGCACCCCTTGTTTC 38220 37 100.0 38 ..................................... CCAATGGGGAGAATACAAGATTCCCTAGCCTGTCCTTG 38295 37 100.0 35 ..................................... AATTAATAAAGGTTCGGGTTTGGCATGATAAAAAC 38367 37 100.0 35 ..................................... AGCCTAATCTCAAAGCCGTTTGGGAGCATTATAAA 38439 37 100.0 37 ..................................... TAATAATAAGGAAAATTAAAAGGAAATTATCATGGGT 38513 37 100.0 37 ..................................... GATATTAGTAGTGCGGGGACGGCAGATCAAGCCGTAA 38587 37 100.0 34 ..................................... TTCTTCTTTGATTTCGGGAATGGGAATTATGACA 38658 37 100.0 35 ..................................... TTTTGTTTTTGTTTCCAACTAGCAACAAGATTACT 38730 37 100.0 38 ..................................... CAACGCGCACACGTTCTACTTGAGTCTCAAGATCGGGT 38805 37 100.0 34 ..................................... TAGCTGTTTGACAATTTCACTGGAGCCAGACTTT 38876 37 100.0 35 ..................................... TGAGTCGGGGGGTCTACATTTTGAAAAGGGGTTTG 38948 37 100.0 34 ..................................... ATTGAAAATATCATGATAGTTGATGATTTCAAAA 39019 37 100.0 41 ..................................... TTCAACGGCAACGCAGCTAGAGACTTAGGGAAAGCGGCTAA 39097 37 100.0 35 ..................................... AAATTAGCGGCTTCAACATTTATACTAATACTTTC 39169 37 100.0 39 ..................................... TCGGAATCCGCCTGATGAGACTTAGCCCAAAAGTCGAAA 39245 37 97.3 38 ........C............................ GAGATAAGGCATTATTAAATCGCGGCGCCCCTCCATGG 39320 37 94.6 0 ........C.............T.............. | ========== ====== ====== ====== ===================================== ========================================= ================== 18 37 99.5 36 GTTGAAATAACCTATAATCCCTATCAGGGATTGAAAC # Left flank : AACCTGGGGGATATCCCTCTAAGTCCGACGGCCTTGGGATTACGGTATCGGGTGGTGGTGGAAAGTAACAGTGATGCAGACCTTCGCCGTGTGCGGTCGGTTGTCCCTGAAGCCTTTACAACGGTGGTACAGGGTCGCTCTGTGGTGCAAGCGGGGGCGTTTCGAGATCAATATCGGGCAAATTCACTCTTGCAACAGTTAACCCGCAGTGGGTTGCGAGCCAGAATTGAGATGATGAATTAGTGTTTTTGGCGACAACCTATAGCTGTTCAAAATGGGAGGGGAAATTTTGGCTCTGAAAGCTCTGTCTGTTATGGGTTTGAGGTGTCTTAAGGCAGAAAAGAGGTTGTCGGAGTTTCTGAATACCTTATGGGAAAAGGGTTTTGGCGTTTTTTTATTTTTGCCCGTTGACAAGTCGATGGCTGAAATGATACATTTAGATCAGGTTGTCAGAATCGTACCTCGAAAACCAAATATATCAAGGGTTTCAGAAGCCTGCG # Right flank : CGAATCTAGTAATTCGTAATTCGTAATTCGTAATTCAACTAATTCACCCTTTTACCCCTGACCCGGCATCTGTCGGTACAATATAGCGTTGTAATATTAAGAATAATAGTAAAACAGGGGCAATAGAAATCACAGAGCCCGCCGCAATTAATCGCCAGTCGAGGGAGAATGTTCCGGCTAGGGTTGCTACTCCTAAAGGCATGGTATAGAAGTCCGGCTGGTCTAAAACTAATAGCGGCCAGAGAAAGTCACTCCACGACCCAATAAACACAAATATTGCTAGGGTAATTAACGCGGGTTTAGCCGCAGGTATCATCACATTCCACCAGATTCCTAATTCTGAACAGCCATCAATTCTGGCGGCTTCTTCTAATTCTTTCGGGACACTTTGAAAGGCTTGTCTTAACAGAAATATGCCAAATGCGGAGGCAATACTGGGAAAAATAATTCCCAAATAACTATTTCTTAATTCTAATTGTACAGTTAACACATATAACGGA # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAAATAACCTATAATCCCTATCAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.20,-7.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [56.7-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.64 Confidence: HIGH] # Array family : NA // Array 1 186347-191674 **** Predicted by CRISPRDetect 2.4 *** >NZ_LT797701.1 Planktothrix sp. PCC 11201 isolate BBR_PRJEB10991, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== =========================================== ================== 186347 37 100.0 38 ..................................... CAAATACAGACGGGGGTAAATGATAAGCAGAAATTAAA 186422 37 100.0 34 ..................................... AGCTGCGATCGCCTCCAACTCCTTCCAGAATCCG 186493 37 100.0 33 ..................................... CAACATTATAGATGGCGGGAAATTTGGCAAAAA 186563 37 100.0 36 ..................................... ACCCCTTGGCTACCAGGTAAGGGAACTGCTATATCT 186636 37 100.0 34 ..................................... TTAATCTCAAAGAAGATCCAAGCATTGCTGCATT 186707 37 100.0 34 ..................................... GGAATGCAGACAACTAACATACAGGGAATATAAA 186778 37 100.0 35 ..................................... CAGCAAATTCAGTCAGATTACAAACCCTCTCCTTA 186850 37 100.0 36 ..................................... GTGCCAACCGAAGTGAGTTTGGATTCCTTGATTGGC 186923 37 100.0 35 ..................................... GGGGAAAGCGCAAGGCAAAATGGTCGGGTTCAGAG 186995 37 100.0 35 ..................................... AGAGTCCCAACCTTCACAGCAGGGAAGGGATTTAG 187067 37 100.0 34 ..................................... AACCAATCCCCGCAATAACTGGTCAGAATTTCTG 187138 37 100.0 35 ..................................... AGCTCAAAACCCCACTTCCGGATTAAAGACCGGAC 187210 37 100.0 38 ..................................... ATTCAGTTTGGTGACAAAGTTCCCGAAAAGAATCAGGG 187285 37 100.0 38 ..................................... GCCATGAACGAACAGGGGAAGTATATTCTAATAACTCA 187360 37 100.0 34 ..................................... ACTCCCCAATAATCATTTGGCGATCGCCTTTTTG 187431 37 100.0 33 ..................................... GCTACCTTGGATTCAAATGCCAAGATCCCAAAA 187501 37 100.0 35 ..................................... TACTTTATGCAACAAATGAATATATCAATTATGAG 187573 37 100.0 35 ..................................... ATCTGACAAAATATGTGATCGCTGTGATTGGAGTA 187645 37 100.0 33 ..................................... GTTACTAATTCAAATTCCTGTCTGGCTTGTTCC 187715 37 100.0 35 ..................................... GGGTTTTATATCACCAGAGAACCTTGTAATCGTGA 187787 37 100.0 37 ..................................... ATTGCTGCATACCATAGCTGCAATGATAGGATATCTA 187861 37 100.0 34 ..................................... ATTGCAGCCGAAACATTAGCGCTACCATCAAAAC 187932 37 100.0 37 ..................................... TAATCAGTACGATTTAGGGGAGAAAATAACTTATCTT 188006 37 100.0 37 ..................................... CAAAAAAATCCGAGTTCAGCCGACAAAATTAATTGGA 188080 37 100.0 36 ..................................... CCCAGGGGGGTGGATCGCGTTCCTTTCCTTATACAG 188153 37 100.0 33 ..................................... CAATACCCCAAACTGTCCAGCTTACTGATTTAG 188223 37 100.0 37 ..................................... CGGCTTGCAATTTTTGAGCCTTTTTCTTCATTTCGGA 188297 37 100.0 32 ..................................... CGGCCACTGCCCCGGTGAGGTAACAGGTAACT 188366 37 100.0 33 ..................................... CCATTTGCAGCCCATCGCTTTGATTTGCTCTTT 188436 37 100.0 34 ..................................... AGATCCTTTTAGCTGTGAACAAGCTAATCAAATT 188507 37 100.0 34 ..................................... GTGCTTTGGAGTTTTCGAGCCAAACCCGAACAGG 188578 37 100.0 34 ..................................... CTCTTTAACAGAAGCAAAACTCAAATCCTGAACT 188649 37 100.0 42 ..................................... TTGCCATAATTGCGGAGCCAAATCACCCCGCCCGGTTTTCTG 188728 37 100.0 34 ..................................... ATTAACAATCTTATATCAATATCCACTCGCAAGG 188799 37 100.0 34 ..................................... GGACTTTGGATTAGAACAGGAATTGTCGGGGCTT 188870 37 100.0 36 ..................................... GTTTAAGTCCATAAACCATTCTCTTTTTACTGGTTT 188943 37 100.0 35 ..................................... TTGTTTGTAGGGTTTGAGGGCGGCTTGGAGTTCTC 189015 37 100.0 40 ..................................... TCATCGGCAAAAAATTCATCAACCGCTTCTGCTGTCATTT 189092 37 100.0 34 ..................................... ATGGTCATAATAGAAAAAACCCTGAACAGCAACG 189163 37 100.0 37 ..................................... GGCTCTCAGTTCACGAATCTTTAGCCAAGGAATATGT 189237 37 100.0 34 ..................................... ACCTCCTGACGATCAGCTAAAGGAAGAACTCTGC 189308 37 100.0 34 ..................................... ACTTGATTAAATTTGTTTTAATGCTGTTTGTTTG 189379 37 100.0 43 ..................................... CAACATTAAGCGAAGAGGCTTACTTCAATGAACTCACAGTTTC 189459 37 100.0 35 ..................................... GGGTGTAGGCAAAAGGATTCTTGATTGATATTGTC 189531 37 100.0 35 ..................................... ATTATTTTCTCCTTGATTACTTCCAAAAGCTATGA 189603 37 100.0 35 ..................................... CATCTTCCTGACATCAAACTTTATAGTGCCTGTGT 189675 37 100.0 36 ..................................... AGTTATCTTGAGGGGGATTTTCACCCCCTCGGATTT 189748 37 100.0 34 ..................................... TTCCCACTGCGATCAATTCCTTCAAAAACTATTA 189819 37 100.0 37 ..................................... TAGATGCAAGCCTGTCAGACCTCAAGGTGATAAGATT 189893 37 100.0 35 ..................................... ATCCTAGAAGATTTTGAATCAGCCCCTTCAAATAG 189965 37 100.0 32 ..................................... GAACTCTCAATAATTCCCGCTAAAATATCTTC 190034 37 100.0 34 ..................................... ATTAACAACTTATTAATCAAGATGACACAAACAG 190105 37 100.0 35 ..................................... GAAAAAATCCAGGATGGAAAAACGAACCGCTTATC 190177 37 100.0 37 ..................................... ATTCTTTTCAACCAAGAAAGATGCCAACGGTAATCCC 190251 37 100.0 36 ..................................... TATAAACCTACTCCCGATGGAAGTTTCCTATATTGT 190324 37 100.0 35 ..................................... AAGAATATTATAGATGTCTTGAAGAATATCAAGAG 190396 37 100.0 38 ..................................... AACGCAAAACTAGATTCTCTAAGCAACAACATCCTGAT 190471 37 100.0 35 ..................................... TGGGCTTTTCAAGGGAGCGATCGCCACAAACGATG 190543 37 100.0 35 ..................................... TCCATAGCCATAACTGCGTTTTTTCCCAATTCCTT 190615 37 100.0 40 ..................................... GCAATAAATCTCCAGTATTGGGATCTACGAGTTTCCCTTC 190692 37 100.0 35 ..................................... ATTCAATTTGATAAATCCCCTGTAGAGAAAAATAT 190764 37 100.0 34 ..................................... CATCTTAAGCGGTAAGACGATCTGAACTGTTCTA 190835 37 100.0 34 ..................................... CCATTTTTAGAGGGATCAAATTGTGGTCTAGGAT 190906 37 100.0 37 ..................................... AATGAAAAAGTGCGTCAAAATCCGTCAACAACGAATG 190980 37 100.0 34 ..................................... ACATTTGATTTGTCTCCTAATTGTTGTTAATTGA 191051 37 100.0 34 ..................................... GAATTGGGATAATAATTCGATTCCTGAAAAAATC 191122 37 100.0 38 ..................................... GTAGGCGGAAATTGATTTACAAACGTGGCTGAACTGGT 191197 37 100.0 38 ..................................... CTCGATTTGACTGGCATCAATGCCGAAATACAGCAGGA 191272 37 100.0 33 ..................................... AGGATGATTATGGCGATGATCGACCTTTTGGAG 191342 37 100.0 37 ..................................... GGTAGATACCACCCTGCCCGCTAATCAGGAAGTGATT 191416 37 100.0 33 ..................................... TCCATTTGTTGAATATTGAACATACAATAAGAC 191486 37 100.0 36 ..................................... GAGCAGTATTCTTTTGTAGTAATATAGTCATTAATG 191559 37 100.0 42 ..................................... ATAATCGCAATTAACTTCCCATTCCCAGCCGGGGGCGTGGGT 191638 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== =========================================== ================== 74 37 100.0 35 GTTGAAATGCCTTATAATCCCTTTCAGGGATTGAAAC # Left flank : GACAAAAATGGAATCTTTGGAGTCTGAACCTACGGCAGCATCTAAGGTTTTATTATATGATGAATCTATTCCTGAGCCAGAGGTTCAGCCCCCCTCCAAGTCAATGTCTAAGTGGAAGGAGGTAGTTTTTATTTTGAGTTTATTTGTGATATTTATTGCCGGGGGTTTTGCGATTTGGTGGCAAATTCGTCAGTCTCAACTGCAATCCATTCCCAGTCAACCCACTCAGACACGCTGATGGGGCCCAATTTCCGACAACCTATAGCTGTTCAAAATAGAAGGGGAAATTTTGGGTCTGAAAGGTTTATCTGTTATGGGTTTGAGATGTCTTAAGGCGGTAAGGAGGTTGTCAGAATTCCTGAATGCTTTATGGGAAGAGGGTTTCAGCCTTTTTTTGTTTTTGCCCGTTGACAAGTTGATGGCTGAAATGATATATTCGATTCAGGTTGTCGGAATCGTACCTCGAAAACTAAATATATCAAGGGTTCCAGAAGCCCGCT # Right flank : CATTTCCAGGTTTAGGAAACAGCCAGAAGTATTACCCCTGTGCCCTGTTCCCTGTTCCCTCCTTAAGCAATATTAGGCGGAATTTTACGCGATTTTAACTGACGCCGTTGTTGATAGTCCTGTAAATAAACCTGAATTAACTCTTGGATTTCACTACGTTTAATTTCCGTAGCCGACTGAAAATTATTCGGCGTTTCAAAAAAGCATAAACTATCCGGCATTTCTAAAACAACCATTTGAAATAAAATATGGGTCACAGGTAAAGGAATCGCTAAAACCCGAGAATCCGCATCAGGATTCGTATAACTCAAAGCATCTTCTAAGGTAGAAAAAGCATAAATCACTCGTTTTTTAATCTGCGGTTGATCTACATTAATAAACGGTTGCACCACCCAACTTTGGTCTAAAGTTTGTAAAATATAATATTCGGGATGTTCTAATTGTTCCGCTAATAATTTTAACGCTGGAGCGATCGCTTCCACAATTTGAGGAGTGGTTCC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAAATGCCTTATAATCCCTTTCAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.16%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.20,-7.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [55.0-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.37 Confidence: HIGH] # Array family : NA // Array 1 148062-149736 **** Predicted by CRISPRDetect 2.4 *** >NZ_LT797705.1 Planktothrix sp. PCC 11201 isolate BBR_PRJEB10991, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================================== ================== 148062 36 100.0 39 .................................... TTCATTAGATATCACCCAAAATGTTTTTTCCGTCATTTT 148137 36 100.0 37 .................................... CTTTTCGTAGACCTTTTGAAGAATCAGATAACCTACT 148210 36 100.0 39 .................................... TCAACAACTACAGCTGACGTTCCTTGAGGAATTCGAATA 148285 36 100.0 34 .................................... CCAGTTATCTGTTCCGGAGTATTCGCATATTTTG 148355 36 100.0 50 .................................... CTTTCATTTTACCTAGTTATGGTTAACAATTAGTTTAGCTGAAGTTTTTT 148441 36 100.0 37 .................................... TTTAAACTCAAAGCCCATCCGTTTAAAATGGACGAAA 148514 36 100.0 37 .................................... CAGTATACAGTGATTTTTGAACGAACGGTAAAAAAAT 148587 36 100.0 36 .................................... AAAAAACTGCGATTGTACCGTGGAAAGCGGAAGTTA 148659 36 100.0 36 .................................... ATGTAACTGCAGTATTTGCTAACCGTTTGGATAAGT 148731 36 100.0 39 .................................... AATTCACGGATGAGACTTTCATAATCTATACCGTAAATT 148806 36 100.0 41 .................................... CAAACTCAAAACAACAACATATTTTTTCATTGTCTTTATCC 148883 36 100.0 42 .................................... TGGATCATACGGTTCTGGTTCTTTCGGTGGTATTGGTTGTGG 148961 36 100.0 39 .................................... ATTCGACTGTTTGTACTGTCGGTCTGAAGCAAAAATTTT 149036 36 100.0 34 .................................... ATTAAGTTAAACACTGATTGATTGATGGGTGTGA 149106 36 100.0 43 .................................... GCTTCTACTTTTAAATCAGAAGGGATTGAAGAAAGTAAAACCA 149185 36 100.0 34 .................................... CTTTAATTACAGGGGAATATCCAATAATTTGAAA 149255 36 100.0 43 .................................... AAATTACCCAAAAACAAGAAGCAGAGAAGCAACAACTAAAACT 149334 36 100.0 40 .................................... AATTTGGTGCTAGTTTGCCCATAGTATTCCACAACTAGTG 149410 36 100.0 36 .................................... ATTATATTCCCTGAATAAGATCGAAGCATTTCCAAG 149482 36 100.0 37 .................................... CTTGTCGGTTTGTTTCTTTCGGTTTCTGTTGGTTTTA 149555 36 100.0 37 .................................... TCTATAAGAAAATAGACGGACATGCAAACCCCCAAAC 149628 36 100.0 37 .................................... TTCCGTTCATAATGATATCCCCATACTAAAAACAATG 149701 36 91.7 0 ...........................T..A...G. | ========== ====== ====== ====== ==================================== ================================================== ================== 23 36 99.6 39 CCCTTCCGAAGGGTTTAATTCGGATTAGTTGGAAAC # Left flank : AATGTTTTATTAGCTTGGAAGAAATGCGACAATTGCATCAAAAGGTGAAAAAATTGGTTTTACCGCAGGAGGATAATGTCCGTTTCTACTGGATTTCTAATGATGCTCTTTCGATTGTTTTAACTATTGGCAGTCAAAAGCCTGAACCTCCTCCTCAATATTATGTGATTTAGGAAAATTCTGGTGATCCGATGTTCTGTCCTTGGGGATGGGAAGGTGCGTCGATAGGGGGATTTTAGGTATTGTTGAATTGTAGAATAGGCTCAAATTCCTTTCAGATAAGGGTTTTAGCGGATTATGGGGATGACGCTGGGCTAATCGACGCACCTCGCCCAATTCCTGAAACCCCTATGTTTTCGTTGAGGTGCGTCGAATCTTTACACAGAGGGCGTTTGAGGGCTATGAATTTGCTGTTTTTGAGTCATGATCTATGGTATATTCAGGGGGTGCGTCGATTTGAAGGCTGTAGCTCCCTCTGGGTCTACCTTCTGCGGCGAACT # Right flank : CGATCGCTCTTTTTCCATGTGAGTCAGACTCACCTTTTTTTGTGACCTTTAACTTAAAGATCACCTCAAGGAAAACCCCATTTCCATAGCTGTGCTTTAATCCAAAATAAGTTAAAGCAAAAAAACCGAGGTTTAAAAAAACCTATGACAGCAAATCGTCGGGTACTGATTTTGGCAGATAGTGATAATACTTTCTTAGCCGCACAAACATTTAACCGAAAACTAGATTGGCATAAAATCTGCAATTATCTCGCCGATCCCAATGAAGGGAGAGAATTAATTGAAATGGTGATTTATGTCGGTTTACCTCCGGCTAGAGAAAGATTTGAAGAACAACGGAAAAGCAAAGAACAATTTATTTATTGGGCAAAAAGTAATGGGTTTTTAGTAGTTCATAAAGAAGGAAAACCCAAAGGAGATGATTATGAAACCAATATCGATATTGTGATGGCAATGGATGCCATAGAATTAGCCATAGAAGCTCATCCAGATATTGTGGT # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.00, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCCTTCCGAAGGGTTTAATTCGGATTAGTTGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.80,-4.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [40.0-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.27 Confidence: MEDIUM] # Array family : NA // Array 2 161070-161841 **** Predicted by CRISPRDetect 2.4 *** >NZ_LT797705.1 Planktothrix sp. PCC 11201 isolate BBR_PRJEB10991, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================================ ================== 161070 36 100.0 36 .................................... GTAACTTAATTTACAATGCGGGTAAAAAGGAGTCAA 161142 36 100.0 34 .................................... CGCTACCAGTAATGTCTGGACCTGCTACGCTAGT 161212 36 100.0 38 .................................... TTCTGGTACCCATTGCTGGGGTTCGACCACAGGGGTGG 161286 36 100.0 36 .................................... TGACAAATATCAAACCTATAAACACTCAACACCTTC 161358 36 97.2 36 ..C................................. CAACAGGCTTCTGCTCGTAGTCAGGAAGCATATTTT 161430 36 97.2 39 ..C................................. TTGACGTTCATATAACCCGCGTCAAGGTTCATGAACATT 161505 36 97.2 44 ..C................................. TCACCCGGATCAGTTAGGATATCCCCACGGAGAGAAAAATCTGA 161585 36 100.0 37 .................................... TGCCATGAGCGAACATAGAAGCGTCGCGCCTTTTCTG 161658 36 97.2 37 ..C................................. TCGAGTGCTTTGTACACCGTCCCCCAACCTGTAAAAG 161731 36 100.0 38 .................................... TGTTTCCCCATTGCAAACGCCATCATCTCAAAGTTAAA 161805 36 97.2 0 .....................A.............. | A [161808] ========== ====== ====== ====== ==================================== ============================================ ================== 11 36 98.7 38 CCTTTCCGAAGGGTTTAATTCGGATTAGTTGGAAAC # Left flank : CAACTTCTTTTAGTTGTGTTTGGCATCGAATGTTACCGATTAATTCTTCTGAATATTTGGAAATTATCACGATTTTTCATGGGGGAGGAGGTTTTATTCCTAGGGATTATCCTTGGTCGGACAAATGGTGTCGAGAAAATTCACAGGGTCAGAAGGAAAATCAGTTTCCTTTATTTGTGGGAAAATTAAAGAACCAAGGGTTTCAATTGACTTGGGGGACAGAAGTTGATCTCAATTAATTGTCTTGAATAAGAAATCCTTAGAAGCTTTGTCAGTATGGATTTTCAGCCATTTGAGAAAGGTTGGTTTACATCCCTATCGACGCACCTCGCCCAACTCCTGAAACCCCTATGTTTTCGTTGAGGTGCGTCGAAGCTTTACGCAGAGGGCGTTTGAGGGCTATGAATTTGCTGTTTTTGAGTGATGATCTATGGTATATTCAGGGGGGGCGTCGATTTGAAGGCTGTAGCTCCCTCTGGGTCTACCCTCTGCGGCGAACT # Right flank : CCAGCAATAGCTACTAGAAAACCACCTACACTCAAAACTCTGTTTGTGTAGGTGGTTTTCATTAAAACCTAAAATAAATCATCGCTTAATCTTTATAAAAACTCCCTAACTTTTGAATATCCTCAGCCATTGTTTTTCTTAAATTCCAAGGTAACAATACCTCAACTTTCGGCCCCCAAGCCCTTAACCGCATAATCACATTATAATCATCAACCCGATAGTTAACTCGGCAATAAACATCATCGGGAGAACGAGAATTTAAAACCATAATTAACCGTTGTTTTTCTGAATCATTGAGATGAGACTGAGAAATTAAACCCTGGGCATATTTATAGGGAATTTTCTTAAATAGTTCATCTCGTTCTGTTCCTTCAATATAACGGTTATGAAAATAACGATCAAAACGAACTAATAATAAATCATCCGGTTTATAGAAATCAAATCCCCAGGCTTGACTTCTTAAATCTTCTATAGTTTTAGGGGTTTTAGATTGGCAAATC # Questionable array : NO Score: 3.20 # Score Detail : 1:0, 2:0, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCTTTCCGAAGGGTTTAATTCGGATTAGTTGGAAAC # Alternate repeat : CCCTTCCGAAGGGTTTAATTCGGATTAGTTGGAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.80,-4.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [36.7-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.27 Confidence: MEDIUM] # Array family : NA // Array 1 533239-530363 **** Predicted by CRISPRDetect 2.4 *** >NZ_LT797710.1 Planktothrix sp. PCC 11201 isolate BBR_PRJEB10991, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================== ================== 533238 37 100.0 36 ..................................... TCAAAATAACCTTTAAGATGGGAAGCGATCGCGATG 533165 37 100.0 35 ..................................... TTCATCCGTTTCGGGCTGTGGGTCGCTATCATTCG 533093 37 100.0 37 ..................................... ATTCTCGGATTGATTTTGATAAAGATGGAAAATTTAG 533019 37 100.0 36 ..................................... TTGAGCTATATAGGAATAAGGTTGCCTCCGTGATTG 532946 37 100.0 37 ..................................... GAAAAAACTTGGGATATTTGTTAGCCCGTTCGAGTGG 532872 37 100.0 36 ..................................... AGAATTACAAATGGTAAACGCGACGGCGTTTGCAAG 532799 37 100.0 37 ..................................... CTACTTTGAAATATTCCCGAATCTCCCGCCCCTGTTG 532725 37 100.0 36 ..................................... CCATTGATAGAGACGTTAGCTCTGAATCCTTTCTAG 532652 37 100.0 35 ..................................... TGCGACCTGCCTGGCTCTTCTGGCTGGCAATATCG 532580 37 100.0 35 ..................................... GGTATGGAATTCCCCGTGCCATGAGAAAATTAGGG 532508 37 100.0 38 ..................................... ACCTTTAATGGCCTGGAATTTACTCTTAATGTTTGGCG 532433 37 100.0 34 ..................................... GCTTTAAACCGGACAATCCTCGCCCTGACCCTTG 532362 37 100.0 38 ..................................... ATCTGTCCCTAGAGATATATCCTTGAGACGCAATAAAG 532287 37 100.0 39 ..................................... ATTCCGGTTTTATTCCCAATCAAACTAATAGCGCCACAG 532211 37 100.0 35 ..................................... TTCGGATTTGAGAGAAAGCGGCTCAACGGAACAGG 532139 37 100.0 36 ..................................... ACCCAACATGATATACCATCTTTAAGGTGAATAGTG 532066 37 100.0 35 ..................................... GTTCAACATTAAACTTTGTTACGATTCGGATATTG 531994 37 100.0 36 ..................................... ATTATTAACGGCGGTCAATGGGGGGATTACTACGCG 531921 37 100.0 35 ..................................... TTATTTGACGAGGCAGGCGCTTTGATGTTTTCTAG 531849 37 100.0 35 ..................................... AGGTTCCTGCGATTGGAGTTGTGGCGGGTGAAAAG 531777 37 100.0 36 ..................................... AAAGATTCAGTATCGGGTATTAGGTGAGGGTTGGTG 531704 37 100.0 35 ..................................... CGACTCAACTCTAGGGAATCCCATCTGTTGCCAGG 531632 37 100.0 37 ..................................... GAAATGATTAATCTCACTCGACTAGGGGCAATCTTTG 531558 37 100.0 35 ..................................... AAACTATCTGCCATATCTTTAGATGCTTTTAATTG 531486 37 100.0 34 ..................................... GACAAAACGCTCCAACTTAGACTATAGGCTTCAA 531415 37 100.0 36 ..................................... CGAAAATTGCCAATAGGGGATTAATTGCCAGAGACG 531342 37 100.0 35 ..................................... CAGGAAGTCTATAGCCCAGTCTAACCAAGGATACG 531270 37 100.0 35 ..................................... TGTATGTATTGGAACTATGAAACATCTTCGCCCTT 531198 37 100.0 36 ..................................... TGATCTCCTCCGGTGGCTTCAAAAATATCTTGAATT 531125 37 100.0 34 ..................................... TTCCACAATCTTCGCTACTTTATCTTGAATAGAA 531054 37 100.0 33 ..................................... ATCGGAAAACTCACAATTCATGGAAGCGATCGC 530984 37 100.0 34 ..................................... CCATTAATAGCAAATTCTAAGATGGCTTCTTGAT 530913 37 100.0 42 ..................................... GTAGAAAATAATCCCATTAGAAAGCACCAACTATTAAAAGAG 530834 37 100.0 36 ..................................... CGTTGTTTAGACCAGAGGAATATTTGAGGCGATCCA 530761 37 100.0 40 ..................................... AAAAGTTTGTCCGGGCTGTAGTTGTGGACAAGCCCCGATT 530684 37 100.0 35 ..................................... AAAAGGCAGATAATGGGCGGTGCGAGTCAAGCTGA 530612 37 100.0 34 ..................................... TCTATCGTTGATAAACTCATTGATTAAATTCCAG 530541 37 100.0 35 ..................................... TCATTTTATTAAATGTAATGAGCATCTTCTTCATA 530469 37 100.0 33 ..................................... CAAGGGGGATTAGTCCTTCTCCAAAGCAGTGAT 530399 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ========================================== ================== 40 37 100.0 36 GTTGCAATAACCAATAATCCCTTTCAGGGATTGAAAC # Left flank : ACCCGAAAATTACTCGGATTTTATCTACTATTCATGTTGAGCGTCCTTCCCAAAAGGGAATTTTAATTGGCCATCAGGGCAGTATGTTGAAAACCATTGGCAGTGATGCCCGCCAACAGATTCAAAAGTTGATTGATGGTAAGGTCTATTTGGAGTTATTTGTGAAGGTGCAACCGAAATGGCGTCAGTCCCGCAGTCAGTTGGCGGATTTGGGTTATCAGGTTGAATAGCCGTTTCTAGGATATGGTTTGCGCTAACCTATAGCTGTTCAAAATTGGAGGGGGATTTTTGGGTCTGAAAGGTTTATCTATTATGGGTTTGAGGTGTCTCAAGGCTTCAAGGAGGTTGGCGCGATTCTTGAATACCTTATGGGAATGGGGTTTTGGCGTTTTTTTATTTTTGCGTGTTGACAAGTCGATGGCTGAAATGGTACTTTACGATCAGGTTGTCGGAATCGTACCTCGAAAACTAAATATATCAAGGGTTTCAGAAGCCTGCGG # Right flank : GCAAAATAGATAAAATAGTTGTTGTTGCTTTAGCCCCTAGAAAGAGCGCTAAAGCGCAACAACGTATCAAAGTTTATTTCCAACCTGCGCGATCCATAATTTGAATCGCCTGGGAATTGAATTTTCCGTAGGCTGCAACATTGATCGGATTACTTTTAAATGTGCCAAAACTCGATAGCACAGGAGACACAGGAACACCCGCAACTACAGGATATTCAAAAGCACTTTGAGCAAAAATCTTTTGAGCTTCAGGACTCGCTAAATGCTCTAAAAATTTAATTGCTCCCGCCTTATTGGGGGCATTTTTAATTACCCCAGCCCCGCTAATATTGGTGTGAGTTCCCTGGGCCCTTTGGTTGGGGAAAAATAAACCCACCTTACTGGCGATCGCTTTATCTTCGGGTTTGGGAGAGGCGACTAAACGCCCTAAATAATAAGTATTAGCTAGGGTTAAATGTCCCACACCCGCCGCCACAGCTTTAATTTGAGAAACATCATTT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCAATAACCAATAATCCCTTTCAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.16%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.50,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [60.0-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.5 Confidence: HIGH] # Array family : NA // Array 2 630516-628078 **** Predicted by CRISPRDetect 2.4 *** >NZ_LT797710.1 Planktothrix sp. PCC 11201 isolate BBR_PRJEB10991, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 630515 37 78.4 34 TCGCCC.C...T......................... GGGCGAACTGCTGCTAGACCTGCTGACTGGGCTG T [630506] 630443 37 100.0 35 ..................................... AATAACAATAACTTTAAAAAGGATGGAAGTAAATG 630371 37 100.0 36 ..................................... ATTAGTTCCAGATGAGTAAACCGCATCTCCAATCCG 630298 37 100.0 36 ..................................... GGAAAATCACCTAATTCAATTCAAGAAAAATGGATT 630225 37 100.0 36 ..................................... TCACACTCTTTTTCACCTGGTTCATCATTGTCAGAT 630152 37 100.0 36 ..................................... ATTTTTTGACTGCCTGTACTAGACAAGAACCCAGAT 630079 37 100.0 35 ..................................... ACATGGTACTATTTCCTTAAGTGACTTGTTCACTG 630007 37 100.0 33 ..................................... TCTGGAAATCATGGGGTAACAGCATAATTGTGG 629937 37 100.0 35 ..................................... AGATAATAACCCTAGATATAGAGAGAAAACAAACC 629865 37 100.0 33 ..................................... TTAACGGAAGCCGGTTGGCTTCCCGCCGACGAT 629795 37 100.0 34 ..................................... GTGTGGCTATGATTGATCAAATTGAAAAAATCTA 629724 37 100.0 36 ..................................... TTTTAGTGTTTCTATTTACCTAGTCCCATTCCCTTC 629651 37 100.0 34 ..................................... ACTGGCATGGAGAGGGTTTAAGCAGGCTTCATCA 629580 37 100.0 34 ..................................... AAAGGAAAATTGCACCTGTCCCCGATGCAAAGGG 629509 37 100.0 39 ..................................... GAACCCCGTACATTTTCAACACCAGTGGATTCATTGTTT 629433 37 100.0 39 ..................................... TATTTGTGTGAGTAAGCCCCGCAATTGCTGTTAAATCAG 629357 37 100.0 35 ..................................... ATAGCTATTTTCACCACTACCTTGAGACTGTGTAG 629285 37 100.0 37 ..................................... GGATTGCTCGGTCGTAGTTTGGCGGTGTGATCATCTT 629211 37 100.0 36 ..................................... CCCCAATTACCAACATTATTTCTGAGTTTCCCAAAG 629138 37 100.0 36 ..................................... TATACTGAGAATATATTAACAACATACTTCTAACTT 629065 37 100.0 39 ..................................... ATGAATAATCCCGTATAGGGGTCTGGGGAAGTTCCGGTA 628989 37 100.0 36 ..................................... TTTTGATTGCTATGGTTTCAATGTTACAGTTGTACC 628916 37 100.0 35 ..................................... TAAATATTTATTTGAATGGGAGATTACCTGCCCCC 628844 37 100.0 37 ..................................... TTGAAAGTAAATAGTTTCTCTGATTTTTTAGTTAGAG 628770 37 100.0 39 ..................................... ATTTATGAATCGGGGACAAAGTTGGGTTATGTAGTCCAG 628694 37 100.0 34 ..................................... ATAATGTTTTGCCTGGTAGTCACGGGAAATGGTG 628623 37 100.0 36 ..................................... CCAAATTTACCCAGTTCTACCGACGCACCAACCCCG 628550 37 100.0 35 ..................................... CATCTTAAGTTTGACGGGGGGGAGTATTGGTACTT 628478 37 100.0 32 ..................................... ACGACCAAATCCTATCCCGTTATCCCAGAGAG 628409 37 100.0 37 ..................................... TGATCGCGATCAATTGAATTGGATGGGCATGGAGGGG 628335 37 100.0 38 ..................................... AGGGAACAAATATTAAAGGATCATCTTGATAGACAAAA 628260 37 100.0 38 ..................................... ATCCGACCATCGACTGCATTGTATTCAGGATCTACATC 628185 37 100.0 34 ..................................... CACCAAGGGTATGCCAACCTGGTAAAATGAAACC 628114 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ======================================= ================== 34 37 99.4 36 GTTGAAATCACCTATAATCCCTTTCAGGGATTGAAAC # Left flank : GAGGGGAACAAAAACGTTTAGAACAAACACATCGTCGGGGTCGAAGATTAAGTATTATTGGGTTTTTGCAACAGCAAATCAGTTTTGTTTACGGCTTGGTGATTGGAGGTGTGAATCGCAAGTGTTATATCCAAATGATGGAACAAGAAGCAACAGAGGCTGAAAAAGCCGGACGGATGAGAGTTATTGTCCAAGATAATAGCCCGATACATCAATGCCATGAGGTGAAAAAACTCTGGCCAAAATGGGAAAGTATGGGTTTGTATATTTTCTGTTTACCTAAATATTGTTCCGAAATGAATCCGATTGAATTAGAGTGGCAACATCTCAAAAAAGATGAACTATCAGGACAAACATTTGAGGATGAATTAGACCTAGCTTATGCGGTAATTAATGGTATTCAAGCTAGGGCAGAAAGAGGAAACTACACCACACAACGGATGAAATTTCACTCGGAGCAACAACCAAGTTAACTTTTCGTTACATACTTGTTGATTTTC # Right flank : TATAAATTCTAATGTTAAGTTAGTAGTTTCTAAGTAACAGAGTAAAATTTGTAATTGTTTTTCTAAATGTATGAAAAAACTCTTTTCATTACTTCTATCAAGTTATCTAGTTTCCTCTGTCATCGGGGGTTCCCTTTGTTTAGCTCAAAATAGCCGAATACGAGATGGTATACCGACTAGCAACGATGGCTTTATTACACTAAATTTGCAAAGGGTAACTATCAAAAAAGGACAGACTCAGGAATTGTCGGGTGATCAAAACAGTAGATCGATTCAACCCATATTTATTCACTTAAATGAAGGGGATACTGTTTTCCTCACTCCTGTTTTAGTTCAAGTTCCATTCCGAAGCGTGGATGATCCTATTGTTTATTTCACATTGCGAGATGATCAAAGTAGGGTAGTAAAAAACATTTTTGGCTATCTGGGGACAACTTCATTCAATTATTCTGCCTCTAAAACAGGAAACTACATTCTTGAGATGGCATCCCCCTCAGAAT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:0, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAAATCACCTATAATCCCTTTCAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.16%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.50,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [80.0-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [1.05,4.5 Confidence: MEDIUM] # Array family : NA // Array 3 633359-631727 **** Predicted by CRISPRDetect 2.4 *** >NZ_LT797710.1 Planktothrix sp. PCC 11201 isolate BBR_PRJEB10991, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================== ================== 633358 37 100.0 35 ..................................... TAGAGCATTGTGGGGATTATTTACTTATTTACAAT 633286 37 100.0 40 ..................................... CCATGCAGTATCGGTCAGAGTTAAGGTGTGATTTTTTCTG 633209 37 100.0 38 ..................................... CTCGATGATTTATCCCGATGATAAATTAAACGAATTAA 633134 37 100.0 34 ..................................... ATATAGTTATGGTCGAAAGTTTATCATCTCCCAA 633063 37 100.0 35 ..................................... GGAATCCTAAGACTGGAGAAGCAATTGAAATTCCT 632991 37 100.0 33 ..................................... TGACATCTTTAGGACAAAACCAAACATAAAGAA 632921 37 100.0 33 ..................................... TGACCTAATCCATTGACAGACTTAGAAGCTAAA 632851 37 100.0 33 ..................................... AGGGATGAAAACCGCCTTTTGAATGCCGAAGCC 632781 37 100.0 39 ..................................... ACTGCTTGAAAATTAGAAAGGGTAAAATAGGTATAGATG 632705 37 100.0 33 ..................................... CAGGATTTGATTAAGGAACTTAATGGCAGCAAA 632635 37 100.0 36 ..................................... GCATTCCCTTCAGGGTTTATCATTGTTTCTGGCCCT 632562 37 100.0 36 ..................................... AACGGGACGCTAGGGGCAATACAACCAATTAAGTCG 632489 37 100.0 35 ..................................... GAGGCTTTTCTTACCTCAAAAGAAAGATTTAATTT 632417 37 100.0 36 ..................................... GTGGAATCATGGGGTTTGGTGATGTTGGCTTCTAAG 632344 37 100.0 34 ..................................... CAACCATTCCAGACTCAGGCTTTCTGAAATCTGA 632273 37 100.0 35 ..................................... GAGCAACTTCTGGAGACAGCGATTTGAGGAATGCG 632201 37 100.0 37 ..................................... AATGACACTTGGCCACTAATTCTAGCGACTCCAAAGT 632127 37 100.0 38 ..................................... TTAATGCCTGTGATTCACAGTTTGGTAAATGGATTGCC 632052 37 100.0 35 ..................................... CAAACAGTACCGTTTGAAATTAAGAGGTGTTTATT 631980 37 100.0 38 ..................................... ATAGTGATGCTAGTAAAACACTCATCTATTTTGGTACT 631905 37 100.0 34 ..................................... AATTAGTCCAAAGACTTTTAGCCGGAGAAGCAAA 631834 37 100.0 34 ..................................... CCGAGTTTCTGCCATTTTAAACGGTACGGTAGAA 631763 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ======================================== ================== 23 37 100.0 36 GTTGAAATCACCTATAATCCCTTTCAGGGATTGAAAC # Left flank : ATTTCCGAGGATAAACGTCGCACTAAAATTCATTCGATCTTAAAATCCTATGGTCAATGGATGCAGTACAGTGTGTTTGAATGCGAGTTGACGAACACGGAATATGCGAAATTGCGATCGCGTCTTAACAAAATTATTAACCCTGAAACGGATAGTATTCGCTTTTATTTCCTCTGTGCTTGTTGTCAGGGTAAGGTGGAACGTATCGGCGGTGAACAGCTACGCGATAGTACGATTTTTTTTGCTTAGTGGCGACAACCTATAGCTGTTTGGGAAAGGGTGGCTAAATTAATGGCTGAAACTTCTATCTGTTCTGGGTTTGAACCCTCTCGACTATCTGGGGAGGTTGTCAGAATTCCTGAATGCTTTATGGAGATAGGGTTTCAGCTTTTTTTTGTTTTTGCCTGTTGACAAGTCGATGGCTGAAATGATACATTCAATCCAGGTTGTCAGAATCGTACCTCGAAAACTAAATATATCAAGGGTTTCAGAAGCCTGCG # Right flank : AAACTGCATACCGCACCCGTCGCCCCTGGGTCAATGTTGAAATCACCTAAGTAGGTAGGCAGGAAGAAACGAAAGTATGTAAAGATAAATAAAGAGGAAGAAGAAATCTACCGAGGTCATGAAAATATGGGTGCTCGTTTAAGGGTATTTCTAACTCGTGAGCAAGACAAAACCCTGTTCAACCTGAGAACAGCAGATATACCACAGAAAGTTAAAGACCGAGCCGAAGTGATTCGCTTAAACTCACAAGGTTGGTACGTCGAAAAAATAGCAACTTATTTCAATTGGACGGCACAGACTGTCAGAGAAGTGTTGCACAAATGGGAAAAGTTGGGGCTAGAAGGGTTATGGGAAAAACCAGGTCGCGGGGGGAAAGCCAAGTGGAAAGAAGAGGACTTAGTATTTTTAGAAGAATGTCTCAGAAGAGAACCCCGGACATACAACTCTGAGCAATTAGCCCAAAAATTAGAACAAGAACGGTCGATTAAATTGAGTCCCGA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAAATCACCTATAATCCCTTTCAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.16%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.50,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [46.7-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.77 Confidence: HIGH] # Array family : NA // Array 1 43733-44975 **** Predicted by CRISPRDetect 2.4 *** >NZ_LT797711.1 Planktothrix sp. PCC 11201 isolate BBR_PRJEB10991, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================================== ================== 43733 37 100.0 34 ..................................... AGTTAGTGTATGTCCTTAAGTTTTACCTATTAAT 43804 37 100.0 38 ..................................... TACCCGTTGTGTCCTTCCACTTTAACTTTCGGTTTTGC 43879 37 100.0 51 ..................................... TAGGTATCCCTTTAGCTACTAAGGCTAATGGTTCTGATGTATTAAAGGAGT 43967 37 100.0 41 ..................................... GACGTATACCCCCTTTAATGGGTATACCTTTCTCATGTTCA 44045 37 100.0 42 ..................................... GTTTTACGGTTAACACCTTCAGCAGCAGCAGCAGCTTGTCCT 44124 37 100.0 53 ..................................... TTCAGGGTATAGAAACGACCCATTCATAATTCAAATCTTAGTGCATGAGTTTG 44214 37 100.0 43 ..................................... CATTAGGCGGGTCTCTCTCATCATCTAAGAAAAGTTTGTATGT 44294 37 100.0 49 ..................................... CAGACACTCAAGTGTTCGACAATATTGAGTGTCGATTTCTAGAAGGGAA 44380 37 100.0 43 ..................................... TCAAGTATCCAATTGATTAAGTCCCTTTGGCTATCTATATCCA 44460 37 100.0 42 ..................................... AGCTGTTGAACATGAAGGTGTTTGGCAATTACCAGAAGCAGT 44539 37 100.0 39 ..................................... AATCAGAGTAGCTTGATATACTGACATTACAGAAGCAGT 44615 37 100.0 43 ..................................... TTCTTCTCCAACCGACACACCAACAAAAACTTGAACTCCTTTA 44695 37 100.0 42 ..................................... TACATAGTAATCAGTAGGAAATGATGCAAGACTTCCATCCAT 44774 37 100.0 45 ..................................... AATGAAAGTATTTTCCCATACTTGGATGAATTTAGCCATGGTATT 44856 37 100.0 46 ..................................... TTCAGTGATGTTGAGAACATCGTAACTTGGAGTGTTGTAAACACCT 44939 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ===================================================== ================== 16 37 100.0 43 GTTAGTTTCTATCTTTTCCCCGCAAGGGGACGGAAAC # Left flank : AATTGCTCGGACGGGCAAAATTGTCTTGGTGCGCGAGTCGGGGGTCAATACGGAATTCCTGAAAAGTAAAGCTTCGGTGGAAGCGAGATTTTAGCTGAAACAGCAGAATCTTAAACCAAGTAGGGGCGAATGGCCATTCGCCCCTACCGTGGCTTCTCAGATTTGTCGGACGTTTTAACTCGGATTTGATTAACAAATTGGGGTTGAGCGTCCTATTTTATTGGGTTTTAGGGGGTTGTAATGTTTTGTAAATTTTTTTCATCCGTTGTCGCACGAAGCTAGAAAGCCTAATTCCATCAGAATAGGAGCTTTTTTAAGATTTTTATGGATTTGGGGGTTGACTCGTTAGGAGAATTCGGTTATAGTCTTGAATATCGAGAAATTTACAGGTTCGGGCAGTTGAAAACAACCTATTTTAGTTTTTATACCAGCCATACATCCGTAGTCTCGCGCAAACGCACTTTGAAAACTAAATAGGGTAAGGTTTCCAGAAGGGTAGG # Right flank : CTCAGAAACTGTAACAACGCTCAAGTGGTAATCTGTCAGGCATTTAAACGGCTACACATCCCCATAATTAAGGGTTTTTGGTCTTTTTGCAAAAAAAGTTGATTTTTAAGTCATTTTTACAAAAAATTGTTAAAATAGAGAAAGGTGAGCGATCGCGCAGTGTCGAAACTCATCAGAAACCATCATGAATCAAGAAGATTGTTTAGCCGTTTATCAGGCACTTGTAGAGATGCTAAACTCTATAAAATTGGGGTGGGTAACCGAACAAGTTGCCGATGTAATTAGTGCGGGAAAAACTACCGAAGAATTGGTATCAGGACGGAAATCTCCTGATTTAAAGTTAAATTATTATACACCCCAAGAACAACTATTACTTTTAATTAATGCGATTGAGAAATCCGTCATTAATACCGGAGAAATCGAAACAGAAATTCTGGATATTTTCAGCCATGAAGCCCAAAATAGTGATTTAAAACCAGAATTGAGATTTACCTCCTCGG # Questionable array : NO Score: 3.19 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:-0.06, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAGTTTCTATCTTTTCCCCGCAAGGGGACGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.35%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-9.20,-8.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [53.3-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA // Array 2 190490-188049 **** Predicted by CRISPRDetect 2.4 *** >NZ_LT797711.1 Planktothrix sp. PCC 11201 isolate BBR_PRJEB10991, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================================== ================== 190489 37 100.0 45 ..................................... TTTCTAACCCTTCTCGTAACATAGCATCATCGCCTTGACTACACA 190407 37 100.0 42 ..................................... TTGGTATACTATATATACTAGCACATTAAATATTTTATAAGT 190328 37 100.0 49 ..................................... CGGAAACTTACAGTCTAAAGCTGGCAAAAATTTAATGCTTGCCAGTAGG 190242 37 100.0 45 ..................................... CATGTTATATTTATCAGGGACTGCAGCACCTTCATCAGCAATAAC 190160 37 100.0 39 ..................................... CCATTGCTTGCTGAAGGTTGTCAGTCAGAACTACACCCT 190084 37 100.0 46 ..................................... TCCTATAAAGTTTTATATGTTAAGCAAGTGCTTGACTAGTCAACAT 190001 37 100.0 37 ..................................... TTTGTAATCTGGGATATTTTTCACATCATTTGAATCG 189927 37 100.0 41 ..................................... CTTTTTCAAGTTGGGCTAACCGATGACGTTCTCTTAATCCA 189849 37 100.0 42 ..................................... AAATGATGGAACATCCTTACTATTAATTTGTTTCTTACTTGC 189770 37 100.0 45 ..................................... TAAGGTTTCTTTAATCCCAAAGATTAAATACCTCATAAATCTTTT 189688 37 100.0 42 ..................................... ACAAGTAAGTACAGAAGATGAAGCTAGAGCTATTATTTTGTT 189609 37 100.0 38 ..................................... CTGTTTTAACATCAGGGATATCTTTTACATCTTCGGAA 189534 37 100.0 41 ..................................... AAAGACACTCAGACTTAATGCGGCAAGCTGTTGCTGCATAA 189456 37 100.0 54 ..................................... CTGCCAGACTTATTAAAAAGAAAGGATGACATCATCAAAAAACGAGTTTCTCAA 189365 37 100.0 38 ..................................... ACTTTATTAGTAGTAGTAGTTCGTACTTCAAATCCTTG 189290 37 100.0 48 ..................................... ACCAGTAATTCTGACCTTCCTCTGAACTAGGATTCAGCAAAGTGTCAA 189205 37 100.0 36 ..................................... GTTGAAAAGTCGAGGTGAAACAGCCTCACCATTAGT 189132 37 100.0 44 ..................................... GTAATATTACTCAGATTAAGAAGGAGAAAGGACTTACTAAATCA 189051 37 100.0 39 ..................................... ATTCATCCACTTCAACGTTAAGGGGATTTACTCCCTGAG 188975 37 100.0 51 ..................................... TTCAATCCATTAAAAGTGATTCCGGTTGGGTGTCTGAATTTTTAAGTCTTC 188887 37 100.0 39 ..................................... GTCGTTTTTCGATTGCCAAGCAATCGAACTTACCATCAA 188811 37 100.0 46 ..................................... AAGGGCACCACCCTTTTTATCAGAGAAATCGAAGCAGTTGATGAGA 188728 37 100.0 43 ..................................... ACTTAGAACATTTAATATCACCAGATGGTTTAGTAGTATCTAA 188648 37 100.0 37 ..................................... AGTCGTGGTCCTTGTCCTTTTAAATGAGTAAACATAA 188574 37 100.0 41 ..................................... GTCCTGCTAATGAATGGGGATGGGAAGAACAAAAGGGGTGG 188496 37 100.0 40 ..................................... TCTGTATTGCGACTAAGTGTTCCTAGGAAGTATGCCTGGT 188419 37 100.0 40 ..................................... ATATCATTAACAATAATCTCTACTTCCTGAACTACCACAA 188342 37 100.0 52 ..................................... AAGTGAGAGCTCTTGGTAGAACCTTCACGAGGTGTAGCAATTTCAACTTCAG 188253 37 100.0 46 ..................................... CCTATAATGTTTTAACTATTTCTTAAATCTCTTAGAAGGTTTATAG 188170 37 100.0 48 ..................................... AGGAGAGTAAAACCAGGTGATCGCTATGCACTTGAATCTCTCCCCCCG 188085 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ====================================================== ================== 31 37 100.0 43 GTAGTTTTCTATCTTTTCCCCGCAAGGGGACGGAAAC # Left flank : AGAACGGCGTTGGCTGAAGGTGTTGAAGTTGGATGAGGATAGTTTGCGGGTCTATCCTTTGGATAATATGGCCAAGCAACAGACCCGGGTGTTTGGCAGTGATCCGCCCTATGAACCGCCGGATTATCTGATTTTGTAACGGAATATTACTTTTTCTCAGATTTTTAGAACGTTTTAACTCGGATTTGATCAACAAATTGGGGTTAAGCGTTCTATTTTATGGGGTTTTATGGGATTGTAATGTTTTGTGGGGTTTTCTCCTTCGTTGTCGCAAGAAGCTAGAAAGCGTTACGACGTCAGGGATGAAGATTTTTTGAGATTTTTATGGATTTGGGGGTTGACTCGTTAGGGAAATTCGGTTATAGTCTTGAATATCGAGAAATTTACAGGTTCGGGCAGTTAAAAATAACCTATTTTCGTTTTTATACCAGCCCTTTATCCGTACTCTCGCGCAAACGCACTTTGAAAACTAAATAGCGTAAGGTTTCCATAAGGGTAGG # Right flank : AATACTAAATAGTTATATAATAGTTTATTTGCGTAAGTTTTAATTTTTTAAGTAAAGGGGTAAAATCAGTACAAATAAATTCAGACTTCATCTACCATTTTTAAAATTTGCTCGTACAGAACTGAAGACACTCTAAACTCAGAAGTAGTAATCAAACTATCTATGAGAGGTTTTACATCAACAATTAGAAGGCGATATTTAGCCTCAACCAAAATACCTAATAACCCAGTAATTTTGAGTCCTAAACGATTAGCTTCTGCCCTTCCACGACGCTCATCAATTAATAATAAATCTGCATCAATTTCTAAAGCTAGGGCGATCGCTTGAGATTCCCCTAGATCTAACTTAGCCTCACCTTGAAGCCTTTTTACCCAATCATGATGCAACACGGGTCTAACTTCAAGCCATGAAACCGCTTGAATTTCCAAAGTCCCAGGGACAGGAGGATCAATATCTACAAGTTCAGCATAAACAGCTTCAGGAATCGTAACTTGGTTGTA # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:-0.04, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTAGTTTTCTATCTTTTCCCCGCAAGGGGACGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.35%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.40,-9.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [80.0-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.37 Confidence: LOW] # Array family : NA // Array 3 284035-286930 **** Predicted by CRISPRDetect 2.4 *** >NZ_LT797711.1 Planktothrix sp. PCC 11201 isolate BBR_PRJEB10991, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================================================== ================== 284035 36 100.0 50 .................................... TTCAAAATCCAAATAGGATCTTTAGCTTGAGTATCTGTATGATTTCCAAA 284121 36 100.0 42 .................................... TATTATCAAGTCTTTTACAGTAACCAAATGCGCTCGGTTATA 284199 36 100.0 36 .................................... GTTAGATAGTCCTTCATCTTAACTCAGTACCCTTGA 284271 36 100.0 41 .................................... ACTAACTGGAATGGACAGTTAATATGGTTTAGTTATACACC 284348 36 100.0 43 .................................... ATCCCTGGAGTAGGAGTCATATCATTCAACTCCTTGTCCACCA 284427 36 100.0 39 .................................... ATTAATGCTCCCTGTTACTCTTCAAGGTAGTATTCAATT 284502 36 100.0 49 .................................... CATCCCCATGAGAAAAACCTAGGGTTTTTCCTAATCTGGAATTTTCCCA 284587 36 100.0 45 .................................... TTCTTCAAAATTGGGCCACCACAAACCTCCAGACCAATCAAACCA 284668 36 100.0 45 .................................... GGGTTAAGGGTTGATTAAGTTTGGACTGGCGCAAGTTAACACCAA 284749 36 100.0 66 .................................... TAGAACGCAACACAGGAGCAGTAAATTGAGCAACCATAATATCAATCTCTTTTCTAAATATCAGAA 284851 36 100.0 37 .................................... TTTAGAGGTACTTAATACCTCTACCAACAACATTAAT 284924 36 100.0 46 .................................... TTGGGGTGGGACGATTGGTTCGTCCTGACCGTCCAGAACCCGATAG 285006 36 100.0 46 .................................... TGAGATTGTGATGAGAGATTTACTGAAGCAGTCCTTCAGTTCCTTT 285088 36 100.0 48 .................................... TTCGTTGTAATACTTATGAGGAACCACAGTAGGTTTCCGCATAGATAA 285172 36 100.0 37 .................................... TCCCTGGTGGAAGGCCTTGTACCTGAGCCAGGATGGA 285245 36 100.0 53 .................................... AAGATTGAGCTTGCTGAGAAGAATCTTCATCATATCCCCCCATCATTTCAGCA 285334 36 100.0 46 .................................... CCAGGATGAGAATTACTCATTCCTTGTTGGACAGCTCCAACAATGT 285416 36 100.0 37 .................................... GCCTTCATGACTTTAATAGTGGTCATTCATTGGATTA 285489 36 100.0 42 .................................... AGAGTTACGGAACACCCCAAATTCACCTCCACTGCACTTGGA 285567 36 100.0 44 .................................... AGCTCATATCAAGATGCTAACAACAAAACTCAGCCTTGCTACTT 285647 36 100.0 39 .................................... TGGAAATAGATTGAACAGTGATTTGATTGATAGTAGACA 285722 36 100.0 37 .................................... TACCAGAGTTTGAAACCTTATACATTACATCCACTAA 285795 36 100.0 49 .................................... TTGAGAAATCAAAGCAATCGATGAGGAGATTGACCAGAGGCTCCATAAT 285880 36 100.0 42 .................................... TAATAATTCTAGCATAGAAATTCGAGAAGATGGGTACTTTAA 285958 36 100.0 55 .................................... ATACCATTCTTGAAAGATCCCCGTAACAGATTAGTAGTACATATTTTTAGCCCTG 286049 36 100.0 40 .................................... TTGGTGTGCTTCACTCACCCACTGAAGAAGGGTTTCAGTG 286125 36 100.0 37 .................................... ACCCAGAGCATGGACTCTGGAAGAGGGAACAACTGAA 286198 36 100.0 43 .................................... GACCATCACGGAGGGCTTTCATCTCTGCAATGGTCATCATTCG 286277 36 100.0 43 .................................... ACTTTGAGAAGTGCATAACCACGGTACACCATAGGGGTGCGTC 286356 36 100.0 38 .................................... ATGAAAGTTAGTATTTCTACAAGCAGAGTTCACTTGCG 286430 36 100.0 39 .................................... CATCCTTGTCAAGTTTGGGCGACATATCATCCCCGAAGT 286505 36 100.0 37 .................................... CCTCATCATATTTATAAATCAAAACACTATTCCAATC 286578 36 100.0 42 .................................... TACAAACGCTACTAAGTAAAGGGGAATTAACTACTTGAGTTC 286656 36 100.0 36 .................................... GGAAGACCTTCTTCAACTCTATTATGCAGCTATCGA 286728 36 100.0 49 .................................... TTCCCATCCTTCTCAACACAATGGTCAAGGAATGCTTGTCGATTAGTAC 286813 36 100.0 46 .................................... TTATTAAGTAGTTAATAAATATGAGAGGGGCCCTTATTACTTCCTA 286895 36 97.2 0 .............T...................... | ========== ====== ====== ====== ==================================== ================================================================== ================== 37 36 99.9 43 GTCGCTTCTATTCGTAGAAGTGGAATTAATGGAAAC # Left flank : TTGAAGGGTACAAACCTTATGAAATTCGCTGATGTTATTTTACATTGTCGCTTATGATATTCCCTGTGATAAACGTCGTCGTAAAGTGGCGAATTTATTAGAAGGATATGGGAAGCGGGTTCAATATTCGGTGTTTGAGTGTGTGTTACCTCAATCGAAATATATTGAGTTACAGAAGCGCTTGAAAAAACTGGTGAATTTGACTGAAGATAATCTGCGGTTTTATCCCCTTTCTCGCCATACCTGGGGAAGTGTGGAAACTTGGGGTCAGGGGCCAAAGATTACGGAGTATCCGAGTTCACTGATTATTTGATGGTTTTTGCGAGGCTGCGGGTAAAATGGCTATGATGTCGATTCTGCTATTCAGAGCCTCGCCTAACCTCTCTGTAAGGGTTCTACGGGTTTGATGGTGGGGGGAAATCTTGTTTGGGCTAACGGTTTTTCCCAGCCTCGCAAACTGCCCCTAGACAGCCGATGGTGTCTGGGTTTAAAATAGAGGG # Right flank : CTCACATCAATTAATAGTGTCAGCAATTATTTGACACTATTAATTAGTTAAATAATTCTGAGATGTGGAATTATAGCGGTTTTCAGACGAACAGTTTCTAGGGATAAAAACCCGGTTTCTCAAAGAAGCCGGGTTTTTAGGTTTGTCTCACAAAGCCATGATCAAAAACAGGATAGGAAAAATAATCCCATCCTGTTGAATAATTGATATAAAAATCCGTTAAATCGATCTTAATTTTTTAACATCACATCGCTGTTACCCGTCGTTAAAATCCAAGTTGTCATCTTTTTTTTCCTTAATTAACAGAATTAATTTTGACCATTGATTGAGGTTGTTTATAGTAAGAGATCCCCCCTAACCCCCCTTATTAAGCGACAGGATTGGCAAGTTCTCCTTTTCAATGGGGATATCCGCTCTCAAAGTCCCCATTTTTAAGGGGGATTTAGGGGGATCTTATTAGTCTAACTAACCTCCTCCCCAAAGTTTTTCAAACTCACCAG # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:-0.09, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTTCTATTCGTAGAAGTGGAATTAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.30,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [46.7-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.27 Confidence: MEDIUM] # Array family : NA //