Array 1 218601-216637 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADPDM010000001.1 Bifidobacterium longum strain BSD2780061687b_171204_C6 NODE_1_length_285698_cov_65.1886, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================= ================== 218600 36 100.0 28 .................................... GGAACGCCGGAAGGCTGTTCTAGCGGCC 218536 36 100.0 28 .................................... ATAGAGTCCAGCGGGTTGTATTCCATGT 218472 36 100.0 28 .................................... AAGCAGGCCATCGCTCGCGCCGACGAGG 218408 36 100.0 28 .................................... CTCAGGCATGATACTGTTTTATATGACT 218344 36 100.0 28 .................................... TCGTCTTCGGTGCCCACTCGCGTGCAGC 218280 36 100.0 29 .................................... ATTCATGACGCTTCGGGTGCTGTTGCCGT 218215 36 100.0 29 .................................... GTGAGCTTGTCCGTGTCTTTCATCAGTGG 218150 36 100.0 28 .................................... TGTTTACGCTCAAAAAGCACATTAGATT 218086 36 100.0 28 .................................... CCGAGGCCGGTAGGGTTGCGTGTCTGGT 218022 36 100.0 28 .................................... GTTGTAATCGGTCATAATAGTTTTCAAT 217958 36 100.0 28 .................................... TCTCCCAGTTGCTGCCCCTTGGCGTCGA 217894 36 100.0 28 .................................... CGTATTCATCGTGGCCTCTTCGCGGTTT 217830 36 100.0 28 .................................... CGTACATGATGGGGTCCTTGACCTTGTA 217766 36 100.0 28 .................................... TTGGTGGTGTTGGGCGTCCGGCGCAGAA 217702 36 100.0 28 .................................... ACAGTATTATTGTCCTGATATTCATGTC 217638 36 100.0 29 .................................... TCGTCGTCCATCTCTGTACCTCGGTTTCT 217573 36 100.0 28 .................................... TCCATGACCGCGTCCATCACCTCATGCC 217509 36 100.0 28 .................................... CGTTCCCCAGTGGGGTGAGTGTGATGCC 217445 36 100.0 29 .................................... ACCGATTGCAACGCGAATATCCCGGGTAT 217380 36 100.0 28 .................................... GTTGTTCCGGGAACAACTGGGAACAACT 217316 36 100.0 28 .................................... CTTGCCTCCGTTCTGCATCCAGCTGTCG 217252 36 100.0 29 .................................... ACGCGGCGAAGAATCTTGTTATCGCGGCT 217187 36 100.0 29 .................................... GTCGCACGTGGCATGGCATGTTGGCGAAC 217122 36 100.0 29 .................................... TGTTGAGGGGAACCGTATCAAACCTGATT 217057 36 100.0 28 .................................... TGGTTTCCGTGCCGCATTGGTCGCAGTA 216993 36 100.0 29 .................................... TCATGGGACTGTGAGCGGCGGCGGCGTGA 216928 36 100.0 28 .................................... TAGAAGTGCAGATTCCGTTCCTGCAAAC 216864 36 100.0 28 .................................... AGGACGTGCAACGCAAGTATTTCAAGAT 216800 36 100.0 28 .................................... TCGTCGATGTGTTCCAAGAGGTTTGGTG 216736 36 100.0 28 .................................... TATTGTTCGGGTGCGATGGTGATGATCA 216672 36 86.1 0 ..............................TTG.AT | ========== ====== ====== ====== ==================================== ============================= ================== 31 36 99.6 28 CAAGCTTATCAAGAAGGGTGAATGCTAATTCCCAGC # Left flank : ATTCAACGGTTCCGGTTTGACTATACCGAGCTCATTGAATGATTTTGCGCAGCAATTTGGTTTATATTGCGAAGGCAAAATCGACAGGTTGCAGGTTCCCGAATATGTAGGCGAGTCATGAAACGCGATGAGGACAGTGGCGGCATGTGGTGCTTGGTGATGTTTGATTTGCCGGTCAAGACAAAACGGCAACGGCATGCTGCAACTGTCTTTAGAAATATGTTGCTCGACATGGGATATGGAATGGTGCAGTATTCCGTATATGTGCGGTATACGCCTACGCAATCGGGTAATAGGGCGACGGTCAAAATGATTAAAGACAATCTGCCAGCTAATGGCTTAGTTAGAATTTTGCATATTAGCGATCATCAGTGGTCCACGGCGGCCCGATTTTCTTCTGGAAAACGTGAGATTGAGGAAGAAACGCCTGACTTTCTCACGCTTTTTTGAACGTAGGAGAGTCTGAAAAGATTGAAAAATAGCCCTTCTTGATAGGCTAT # Right flank : GCTGGAATGCTTGGGTTGATTTGGCTGATTTAGCTGTGATGGCCGCTGCGGGAATGGCCCTTGCGCGGTTGGCGGCAGAGGTTGCGGCGCGGATTGCGGCACTGATTGTTGTGCCAATTGCGTCTGCGGTGAAAAATATGGCGACGGCTGTGTCTGACTGTTTATCGGCGGATGTTCCGGCTCAGGTTGTGGCTGGAATGGAGAATATTGCGGTTGCGCCATTGTATGCCCCTGCCCCTTCATTGCCATTTCATTGGCGCATGGCGAGGGCTGAAAACCAAGATGATGAATCTTGCATGAGTTATCCGTGATTCCTGTGCGTTGGTACAGCGCGGAAGGTTGAGCAGCCGACATATGCAGGCTTGTCGGTTCACGCGAATATCGTGGAACACATGACTTCCAATACCCTTCGTATGTCAACCATGTTCCTGCGCACCCTGCGCGAGGACCCCGCTGATGCCGATGTCGATTCAGCCAAGCTGCTGCAGCGCGCCGGCTAT # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CAAGCTTATCAAGAAGGGTGAATGCTAATTCCCAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.30,-1.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [43.3-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA //