Array 1 2193751-2198449 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP054140.1 Desulfobulbus oligotrophicus strain Prop6 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ====================================== ================== 2193751 32 100.0 36 ................................ TAGCGCTAGCTGAGCAAGCTGAATGCTATTTGCCGC 2193819 32 100.0 35 ................................ CAAAAAGGCAACTTGCAAGGCACGGTAGCAGACCC 2193886 32 100.0 34 ................................ TTTCGTAATGCAATCGCCGAGCATGACGGCTGGA 2193952 32 100.0 34 ................................ GCTAGCAGGAAATCGAGGACAGATTGGTTGCCGC 2194018 32 100.0 34 ................................ TGCTGACTGTGGCGGCAGTTCTTGCCGGCCTTTG 2194084 32 100.0 34 ................................ GATCTTTATAAATCAGCTTCAAACGATGGCAGCA 2194150 32 100.0 35 ................................ CCATCGATATTGAAGAGTCCGGGATTTGTGACCTT 2194217 32 100.0 33 ................................ GTAATATATATATATAGGAAGTTAATCATCAAT 2194282 32 100.0 36 ................................ ATTCCCTTGATGTTGATGTGGCCGGTACTCGTGCAC 2194350 32 100.0 35 ................................ TAATTCCTTACGGCGCCATTCGCGCCATTACCTGA 2194417 32 100.0 35 ................................ AATACCAACCCTGGAGAAGTGTATTGGGATGGGCC 2194484 32 100.0 35 ................................ ACAGCGTACCCGTCGTCAGACCGGCGGATACCCTC 2194551 32 100.0 34 ................................ CTGTGATCGGCGTGCCGCCCACCTCCAAGTCAAC 2194617 32 100.0 34 ................................ TTATCAGCTCAGCCACACATGGCGCATGGGAGCA 2194683 32 100.0 33 ................................ GTGCTGACCGGTCCGGAGCTGGAGACCACAGCC 2194748 32 100.0 35 ................................ TAAACGATGTTTAAACGGTGTTGATGATGGCGGGC 2194815 32 100.0 34 ................................ TACCTGGGCCAAGGCGTTTCACTCCGCAGCGTCC 2194881 32 100.0 33 ................................ CACAGATGGTCAGCTTGATCCACAGCCCACCCT 2194946 32 100.0 35 ................................ CCTGTACTGCGCATAATATAATCGGTGAAAATTTT 2195013 32 100.0 35 ................................ TCGTGCACGTCAACGCATAACCATAGCACCGTTAC 2195080 32 100.0 38 ................................ ACCAATTGAAACAGTTGTACCGATTGCTATACCGTTAT 2195150 32 100.0 34 ................................ TCAATTGTTGCCACTGCATACCATCTGTGCGGTT 2195216 32 100.0 34 ................................ ATTCTTCCTCCACCCTCCACGGCTCTCCTTTTCC 2195282 32 100.0 36 ................................ GTGGATGTGACCTTTGAGGGCGTACTGGAGACACCG 2195350 32 100.0 35 ................................ AAATGATGTGGTTTTACCCGGTGATCTGCGCTGGA 2195417 32 100.0 34 ................................ CATGTCTACCCGAGTACCCGGAGCGATCTCTCCT 2195483 32 100.0 36 ................................ TATCCGTATAGGAGCATTTCGCACCAGAACGGGCCG 2195551 32 100.0 35 ................................ ATGCAGGCGGCAAACGCCTGTTCAAAGCTCATGAC 2195618 32 100.0 35 ................................ ACATCGAAGATGAGGCTACCGTGGCTGATGATGCC 2195685 32 100.0 33 ................................ AATGCCCTGCTGGCAAAGCTCAAGGCAGCTGGA 2195750 32 100.0 37 ................................ AAGCGTATCAATGATACGTTGTCCAATGCCAAAATGA 2195819 32 100.0 34 ................................ CAGTCCGGTGACGCAACATATTTCAGTGCCAACC 2195885 32 100.0 36 ................................ TTGCCAACAGACGACAGTATTTCCTTGGCCACACTC 2195953 32 100.0 35 ................................ GTGGCAACAGCTCCGAAGATTGTTGCCTCGTCCGG 2196020 32 100.0 35 ................................ AAGCTTAACAACTCCGCCACCAACGCCGTGGATGT 2196087 32 100.0 36 ................................ GGCAGCGTCGGGTTGACCAACAAACCAAACCTGCCG 2196155 32 100.0 34 ................................ TCTTCATAGCCATAATTTCCCGCAGGCGGAAGAG 2196221 32 100.0 34 ................................ CCCCTCGCCGTTGTATGGGCGATCGAGTGCGACT 2196287 32 100.0 35 ................................ AAGCTTAACAACTCCGCCACCAACGCCGTGGATGT 2196354 32 100.0 36 ................................ GGCAGCGTCGGGTTGACCAACAAACCAAACCTGCCG 2196422 32 100.0 33 ................................ TCGCCAAACAGATACTGATACATCCCGCTGCGC 2196487 32 100.0 34 ................................ TCCCAACAATGCTCTGACGTGTGCCTCTGCCGCG 2196553 32 100.0 34 ................................ ATATTTGCCTCGGTCATCACGGATATAAAACCGG 2196619 32 100.0 35 ................................ CCCATGTCGGATGTTCGATTTTAAGCCGCCTCAAA 2196686 32 100.0 37 ................................ TGGTGCGTCCAGCAACGAGTCGATGAGCTTCAAACAG 2196755 32 100.0 34 ................................ CGGTGATGCGGCATAACCTGCATTTTGCCACCGC 2196821 32 100.0 33 ................................ ATGTTCATGGCGTCCAAAAACGTTGACGCCTCG 2196886 32 100.0 35 ................................ CGAGCGTAAAGAGCGCACAGCCCACGGCCGCAACA 2196953 32 100.0 35 ................................ AACCCCTTTGCGGCCTCTCCCATCAATTTTGTCGC 2197020 32 100.0 34 ................................ ACGACGGGCAGGAGATGGTGTGCCTGAGCAGAGC 2197086 32 100.0 33 ................................ CCGCTGGGCTCCTCGATCCGGTCGGGGAAACCG 2197151 32 100.0 34 ................................ TGCAACTTGTCAGCAGCTGATACACGCAACTCGC 2197217 32 100.0 34 ................................ CCGGTTACGGGCCCGCAGATTGACCAGGGCTCGG 2197283 32 100.0 35 ................................ ACGCCGGCGCTGAAGCCTACGAGAACACCACGGCC 2197350 32 100.0 36 ................................ GTCCTGGTTGGTGGAGGGGTGCCTCCGATGGCAGGC 2197418 32 100.0 35 ................................ GTAATGAGCGGCATAGGTATCGGAATTGCATATCC 2197485 32 96.9 35 ..............A................. TGAAATACGAGGCGACCATTGGCACCATATACGGC 2197552 32 93.8 34 ........T.....A................. GCAGATACCATCCAAAAAAACACCGGTCGCAATG 2197618 32 93.8 35 ........T.....A................. TGATGCAAGCCCCCAACTATGGCGCTTTTTCCGTT 2197685 32 93.8 34 ........T.....A................. ACCGGCAGAGCCTGACGACGATGACGGGCAGCTC 2197751 32 93.8 34 ........T.....A................. CTCCGCAAAGGTCTCCCGTTCGCCAAGGTTTATC 2197817 32 93.8 35 ........T.....A................. ATGGCCTTCGCCATCATGATAAAGCTCATTTGCTA 2197884 32 93.8 34 ........T.....A................. AGCATCAATATGATCGTGCAGGGTGACCTGCACG 2197950 32 93.8 35 ........T.....A................. GGCAATAGTATACCCCCCGAAGTGATATAGATAAT 2198017 32 93.8 35 ........T.....A................. ATGGCCTTCGCCATCATGATAAAGCTCATTTGCTA 2198084 32 93.8 36 ........T.....A................. TCCCAGCCATTACCAAACGTTTGCCAGGTGCTGAGA 2198152 32 93.8 34 ........T.....A................. AATAAATTAAATTTTACACCAACATCGGCAATAG 2198218 32 93.8 36 ........T.....A................. TCCCAGCCATTACCAAACGTTTGCCAGGTGCTGAGA 2198286 32 93.8 34 ........T.....A................. ACCACCTCTCCGAAAGTACCGGCACAATCAATTT 2198352 32 93.8 34 ........T.....A................. TGATTATCACCTTGCTCGTGGATTACGCGCAATC 2198418 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ====================================== ================== 71 32 98.8 35 GTCGCCCCCCACGCGGGGGCGTGGATTGAAAC # Left flank : CGGTAATCTGGAGGTAGGAAGCTGTTATGATGATATTGGTAAGTTATGATGTGCAAACAAGTGATCCAGGCGGTGCCAAACGACTGCGCCGGATAGCCAAAGTGTGTCGTAACTTTGGTCAACGGGTGCAGTTTTCCGTGTTTGAATGCCTGGTGGATCCTGCACAATGGACAAAGTTACGCCAGTCGTTGATTGATGAGATGGATCAGGAGACGGATAGTCTGCGATTTTATTTTCTTGGTGCCAACTGGCGTAAACGGGTAGAACATGTTGGCGCCAAGGCAGGCTTGGATCAGGAAGGCCCGCTTATTGTGTAATATGTGTAATATGGTTTCGCGAACCATCCGTACCCAGCAGAACCCGGCTGCTTCGCGCTCTATGAAAATGCGATGATTGATCAGGAAATACACCTGTACAGAGGAGGAGATAAAGACAGGTAGATCAACCTTCGCGGAAAGTGCTGGAAAAGCTGATTTGTTACATCGTGTTACGAATCAGCA # Right flank : CTTACGTCACGAGCAAAGCACAGTATACAGCCTGGGTCGCCCCCCACGCAGGCCGCTTTTTGATCATGGCTGAAGACTTTACCACCTACAGTTCATCTCAAGCTCTCTGTCAGGTTTGCATTAGAGTAATGAATGATATCTGTATCTGAAGTGTGTGAATTACCAGTTGAAATTATTATGATCAATGCGGAGTGAAAACGTTTTTTTCAGAAGACTGGATTGTTCGGGTTTTAAAAGAAGCTGGTACTGGTTGTCAGGTGTGGATATGTGCCAAAGACATAAACGTGCAGCAGGTGAAATCCGGATGTGGAGGAAGTAAAATATAGGGCAGAAATGGAAAGATATTGAGGTGTGGTCGATGAAAAACAGACAAACCGACTCTTGAGTTGCTCAGTGTGGTTTTGCCATATGTGCATTCCACTTCCGGCTTCATAGACACGGCTTCAGCAGGATATTTTTATTCTTTGCCGGTAACGTTGTCCTGTTGAGCGCAATGTGAC # Questionable array : NO Score: 9.20 # Score Detail : 1:0, 2:3, 3:3, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCCCCCACGCGGGGGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCCCCCCACGCGGGGGCGTGGATCGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.70,-10.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [56.7-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.42,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 2671871-2673730 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP054140.1 Desulfobulbus oligotrophicus strain Prop6 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================== ================== 2671871 36 100.0 36 .................................... GGAAGGCTGTCCAGGGCTGGAGCCTCTTTTTAAGCT 2671943 36 100.0 36 .................................... GATCAAAATTCATTGCGTTGAGCTGCGATGTGTTCA 2672015 36 100.0 35 .................................... TCTCAGATAAGACAGCTGAGAAGAGACGTTTCTAT 2672086 36 100.0 37 .................................... TGACCGTTGAGCTGACTGTAATTAATTTCAAAATTCA 2672159 36 100.0 36 .................................... TAGGTAAACAATTTTAGCGTCAGTAATGTAAACCTG 2672231 36 100.0 37 .................................... ACTGAGATTATTCTTAACCTCAATAACGCCGTCTTCG 2672304 36 100.0 36 .................................... TTGCCGTCGGTTGTAATTGTGGTTGCGAATCCGTTC 2672376 36 100.0 36 .................................... CCCTTCACAGATCTCTGGCGTTTGACCAATACCTGT 2672448 36 100.0 38 .................................... CAGCTGTATCAGCGTGACCGATACAGCTACTTGGGATA 2672522 36 100.0 35 .................................... ATAACAAACCGCCACGTGGGGTACCGTCACCACGT 2672593 36 100.0 39 .................................... ACTTCGGCCCCTGCTGCAATCATAATCTCTCGAACGTGC 2672668 36 100.0 37 .................................... TGGATTAACTTTCCGCTGGCAATGGCTTCTTTTAATG 2672741 36 100.0 37 .................................... TTTTTGCAAATATTGAATTAGTATGACAGATACAACT 2672814 36 100.0 38 .................................... GGTTTGTCCGCGGACTTACCGGAAGTTTCATTTGTTAC 2672888 36 100.0 36 .................................... TTGCGGACCGACCCGTGTCTGGATCGCGGCTGATGG 2672960 36 100.0 35 .................................... CGGCAACCGTCTCCGTTTCATGATGTACATTAGTC 2673031 36 100.0 35 .................................... CAATAGTTCTTGCAGTCGAGCGAAGGATTCCGAAC 2673102 36 100.0 38 .................................... CATTTGCTGTTTTGCCTCCTTGAAAAAGGGTTAATTGG 2673176 36 100.0 37 .................................... TGAATTTTGTAGAATCTCTACATCCCCGCCTATATGA 2673249 36 100.0 38 .................................... ACTGTCTCGTGAGACAGTGGATGCTCCTGTGGGTTAGA 2673323 36 97.2 37 ....................T............... ATATTATCAATTCTATAAGATTATCAAATGATCTTGC 2673396 36 97.2 37 ....................T............... GTGGCTGGGGCGGCCTTAATGATTTGTCGTGCCCTAG 2673469 36 100.0 38 .................................... TTAAATTTTGCCCTGCAATCGATCAGGCCTTTTTGCAA 2673543 36 97.2 42 .....................G.............. TCGGCAATATACCGTTCGTTTCTCGAACCATTAGAATTAAAC 2673621 36 100.0 38 .................................... ATGTAGCGGTAAGCGGTAAACATGAGTCCGATACCGAT 2673695 36 80.6 0 .......CA.T........C...........G.CT. | ========== ====== ====== ====== ==================================== ========================================== ================== 26 36 98.9 37 GTTGGAAGGAATGCCCCGATCAGAGGGGATTAAGAC # Left flank : ATGGCGACTGGTTAAACCGTCACCAGGACTTTCAAATAAACGAACTGAACCAGGCAGAAGCAACAGCACTGCTCACTCTGTTTAAAGACTGGAATCTTGATAACAACAAGTCGTGGAGAAAAACACCGGCCAAAAAAGAGTGGTGGCAAGAGGTAAGAAAGAGGATACAACAGCTGAAGAAAACCGGCTGATCTCTTTAACCAGATGCGGTCCAGGGGCTGTTTCTGACGATCCCCCCTGGACCAACCGCACAACCACCTTGTGTAATGGTATGGTTTATCAGGATAAACTGCGATAGGATGGCACAAACAGACCACCTGTACAGACCGATTGGGGGACCACCACATGCCCGCACTCAAAGTTTCTATGATATTTCAAAATGTTACGATGATTTTCTCACTGTTTTATCACCGTTGCAAAACCCCGGACCCTCTTTTTAGGGGACATGCCCGAATTTGGCCGTGGGACCTGTTGATATCATGATCAAATTCAGGGTAAGA # Right flank : CTTTTTTCCACTTCTGCAACAGGTAACCGGTGCCGGTACATTATCATCCTGTACCAGCTGGTTGACGTCCCTTGGCAACCCTACTGTGCTTTTTTAGTCTTTTTTAACCTCCCTGCCGAAAAATCGCTTTTCTGCCCGTATTTCAAAATAAAGCCGCCGAACAGTCATCTACCTGCGGAGGTGTTATGGAAAATACAGCCAGAAAAATCGATACCCATGAACAGGCCAAAGTTGTCGGCCACATTCAACTCGACACCATCAAAACGACACAGGTGCCCCTTCCGGCTCAGACCGATACGTCGCCGACCGCCGGATCGTTTCTGACCCAGTGGACCAGCACTGCTGATGATGCCGATACCCTGCGCCGCGAACACCAGCGGGTGGTAACGGAAATTTCACTGTTACAGGCCGAAAATCGGTGGCAGGCCATTGTTGACCTCTTTCATCCGGTGGATGATAAGGTGCCGGAGCTTGTTGCTGCCGGGATGGAGACGGAAATC # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGGAAGGAATGCCCCGATCAGAGGGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [11,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.50,-5.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.15,0 Confidence: HIGH] # Array family : NA //