Array 1 284723-283171 **** Predicted by CRISPRDetect 2.4 *** >NZ_RSDU01000002.1 Brochothrix thermosphacta strain TMW 2.2101 Brochothrix_thermosphacta_TMW_22101_seq2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 284722 36 100.0 30 .................................... TGTTTCAAAGTTAGGTGTGTCAATCGTTGT 284656 36 100.0 30 .................................... TATTTAGTGGCACACCCGTTTTTTTACTAA 284590 36 100.0 30 .................................... AGGAACGTCCAAAGGAATAATTATCATGAA 284524 36 100.0 30 .................................... TGGTTTCAGAGAAACGGACATGATGACGGA 284458 36 100.0 30 .................................... ATCACTAAAAGCAATTTCCTTATCATCTTC 284392 36 100.0 30 .................................... TACCCAAAAACGCAAAATAACGTCCGACAA 284326 36 100.0 30 .................................... TGAATCAACAAAAGCGCTCTATATCCCTGA 284260 36 100.0 30 .................................... ATATCTCAGGTGATTTATACCCAATTGAGT 284194 36 100.0 30 .................................... TAATGTGAATGTCACGACCGCTGCTCCTGA 284128 36 100.0 30 .................................... GATGTATCTTTATAACAATTGGTCTTCTAT 284062 36 100.0 30 .................................... TTTTAAGAATAATAACCAATACTGCATATT 283996 36 100.0 30 .................................... ACCACTAGCTACCAAAAAAGGCTGGGTTAT 283930 36 100.0 30 .................................... AGGAACGTCCAAAGGAATAATTATCATGAA 283864 36 100.0 30 .................................... TGTACCTTGCTAGGCAAGCCTCGGAACTAT 283798 36 100.0 30 .................................... CCATACCATGTACATCTTGACCGACTTATC 283732 36 100.0 30 .................................... TACGGCATTCGGTATTCCGTTGTCTCGTTT 283666 36 100.0 30 .................................... TTTAAATTGGGAGCGAGCTAATAAAAATGT 283600 36 100.0 30 .................................... TGGCTAACGGAAGCAGAAAACACAAAACAT 283534 36 100.0 30 .................................... ATATGGTGCAACAGGTATGTTAGGTGTTAT 283468 36 100.0 30 .................................... ATATGGTGCAACAGGTATGTTAGGTGTTAT 283402 36 100.0 30 .................................... CACGCATTTCTTTTTCGTAATCTTTATTAA 283336 36 100.0 30 .................................... CAAGTTTCCAGGATATAACAATCGCCTTAA 283270 36 100.0 30 .................................... AGCGCCTCGGAATATCATATAATTCCCACG 283204 34 88.9 0 ..........................--.....G.G | ========== ====== ====== ====== ==================================== ============================== ================== 24 36 99.5 30 GTTTTAGAGCTGTGTTAAATTGAATGGTATTAAAAC # Left flank : TATTACTAAAATTTATAAACAGCTAGAAAAACAGTATCATAATAATAAGGAAATCGATCTTATTGCTGATCAATTAATAGAGCTCCGTCAACTGATAGGCATTCAGTTAAATGACTATGATTTACCGCTACAACTGAATGAAGAAGTAAAACTATCTTCGCTTTATAAGCTGTTTAATGTTACTATAGAGGTTGAAACAGAGTCGATTTTGGATAGATTATTACTACTGATTGATCTTGTCGCACAATTGAAAATCGCTCGTATCATTATTTTGAATAATGTAAGGTGTTATTTTGTAGAGCAAGAGCTTCTAGAAGTATACAAGTACGCACTCTATAAAAACATAAAGCTATTACTGATTGAATCAACCTTCAAAAAAGGCAAATTGCAATATGAACGAAAATTACAAATTGATAACGATTATATCGAATTTTGGCAGTAATACCTTCATTTTTGAATCGCGCAACGAGAGCAGTAATGACAAAATTTCATTGTTTGAG # Right flank : ATTGACGTCCATTGATATAATGGATGTCTTTTTTTGTTATCTATAACTTTATTATGTCAACTAAATAAAGGGCATTTAAAATAACATGACAAACGTTGTTATGCAAGGTATGATAGAACTAGATTAACATTACTTAAAGGTGGTTGGAGGATGACTGGATTAAAAATTAAGCAATTTAAATTAGATAAACAGGCGATTAAGCAAATTAGTGATGACTATATTGTCGACTATCCAACTGTTTATTTGTTAAATAATGATAAAGAAGCGTATATCGGCGAAACTGTCGCGCTGAAGAATAGAATGCGTGCTCATTTAGCCAATCCGCAGCGCAGTAAACTTACAAAAGCTCATGTCATCAGCCACAATGAATTTAATCAATCCGCCACCTATAATATTGAAACGAAGCTGATTAATTACTTTTTAGCGGATCAAAAATATATCTTACAAAATAAAAGTCAAACGGTTCAAAGTATCACTCATAACTACCATAATAAAGCTTA # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGTTAAATTGAATGGTATTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.78 Confidence: MEDIUM] # Array family : NA //