Array 1 62342-63301 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_WJNE01000012.1 Limosilactobacillus reuteri strain Rat19 NODE_12_length_69801_cov_101.900092, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
     62342	    36	 100.0	    30	....................................	GCGCAACAAGCCCGAATGTTTGTTTGTTAA	
     62408	    36	 100.0	    30	....................................	CGATGTTGAGCAAAAGAACAACGAACAAGA	
     62474	    36	 100.0	    30	....................................	CCAAACGAAACCGAGGAGAACCCCACACCA	
     62540	    36	 100.0	    30	....................................	AAGCCTTGACTAACTCCGCCGGTGCTTGGT	
     62606	    36	 100.0	    30	....................................	AACGGAGCAAAAGGTAAAGCTAATACAGTA	
     62672	    36	 100.0	    30	....................................	CGATGTTGAGCAAAAGAACACCGAGCAAGA	
     62738	    36	 100.0	    30	....................................	GGAAATTCAAAATCTAAAACAAGATAACGA	
     62804	    36	 100.0	    30	....................................	AAACAGTACGATTATTTCAATGTTTAAATA	
     62870	    36	 100.0	    30	....................................	TTATTATTTGGATAATCGATGTGACGCTAA	
     62936	    36	 100.0	    30	....................................	TCGCCGTTTAATTTTAGCGTTGCATAATAG	
     63002	    36	 100.0	    30	....................................	CGTCTAGCTTGGTTACGCTTAGAATAATAC	
     63068	    36	  97.2	    30	...................................C	AGTGAACGGTTGAGTATTGTTGGTAAGATG	
     63134	    36	  97.2	    30	...................................C	TCGTAATGATTTTTTAGTAGGATTTAGAAT	
     63200	    36	  91.7	    30	.......A.......T...................C	TTAACTTATAGATATATTTCTTTAACCATT	
     63266	    36	  91.7	     0	.......A................G...A.......	|                             	
==========	======	======	======	====================================	==============================	==================
        15	    36	  98.5	    30	GTTTTAGGTGTACTTCAAATCAATAATGTTTAGAAT	                              	       

# Left flank :   GAATAATAATTTAGCAACAATTTATTCAACGGAAATTGTAAAGTCAATAATAAAAAATTTAACAGAAGAGGCTCGTCATTTGCTAGATGCTGAAGCACGTCGGCTTTATTCGAATGTTCAAGAAATTTTATTTATGACAGATTTACCGCTCGAAGTTCGTTACGATGGTGACATCAAACGATTATTAAATTATTGTAAGATTAAATTTTCACCATTAGTTCAGCAAAGCCCTTATGATATAATAAAAACAGATTTAAAGTTACATTTAGAATGTGCTGATAGTTCATGTGTTGGGTTAAGTAATGTCGCTAATTACCTAGATTCAGCTCAATTTAACGAACTACAACAACTAAACATTGAATTGAAAATTCCTGTTTTATTAATAGAATTCACAGAAATAGATAATCGTAAATACTATGGAAATGCGAATTTTTATTATATTGACAAGGATTTTGTTGATTGGAAGTTATAAACTATTAATTCAAAATTAGAAAATAATG
# Right flank :  TAAATATTAGTCGAACTCACGGCTGAGAAAAATCTTAAATATGCTTCAAATTTTCCCGCCAACTTCAGCGGGGCTTTTTCATTTTCTTTTTAAACTAGTGTATAATATTTACTAAACCCATTACTAAAAGAGGTGAAGAATGATGGCGACAATTAAAGAAATTGCGGAAAAATCAGGATATTCACCAGCAACGGTATCGCGCCTTTTGAATAATGACCAAAATTTATCGATCAGTCCAAGCACCCGCAATAAGATCATGACGGTGGCTAATGAGCTTGGCTATTGGAACAACCACAAGAAAAACTCTCAGCAGCAACCAATCCGTCCTAATCTTGCTTTATTGTATCGGGTAAGCGGTAAAGAGCAACTGCAAGATGAATATTTTGCGTTTTTACGCAATGCAATTATTAAAGAAGTTGATGAAGCGGGAGCGCAGGTTGAAATCTTTAGTAATATCAAAGATTTAATTGCGGCGGCTGATTCGTTCCAAGGATTTATTG

# Questionable array : NO	 Score: 3.19
# 	Score Detail : 1:0, 2:0, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGGTGTACTTCAAATCAATAATGTTTAGAAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:75.00%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  NA [0.00,0.00] Score: 0/0.37
# 	Array degeneracy analysis prediction:      F [0-6] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [78.3-65.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [0.68,0   Confidence: HIGH] 

# Array family : NA
//