Array 1 134658-137008 **** Predicted by CRISPRDetect 2.4 *** >NZ_PQLH01000011.1 Citrobacter freundii complex sp. CFNIH5 NODE_11, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================== ================== 134658 29 96.6 32 ............................T TTCATTCCATCCTCCGATATTAACCACGTGCG 134719 29 100.0 32 ............................. GCTTTCACCTAAATTTGCTGTTCAGGTTTCAA 134780 29 100.0 32 ............................. CGGGCAATTTGCGTTTCAGGGAACTGGCTCTT 134841 29 100.0 32 ............................. TCTGCTCTCTCCATCGCCGTCATTGAGGCGAC 134902 29 100.0 32 ............................. ACAGAGGGAGGCCGCTGTCGGGTGCGGTTCGT 134963 29 100.0 32 ............................. CTGGCCAATCTGGAAAAATTGCGCGATGCCGT 135024 29 100.0 32 ............................. CTGAGGTCTGCGCTCGCTGATGAGGTGGAAGA 135085 29 100.0 32 ............................. ATATTCAGAAACTCGGTGAGCGTCTTGGTTTG 135146 29 100.0 32 ............................. CCTGTCATTCGTTTTGATGGAAATATGCTTCA 135207 29 100.0 32 ............................. CAAACCGACGAAAAAATCACGCATACCGTCAT 135268 29 100.0 32 ............................. TGCATCTGGAAGCTGGCAAAGTAGTTACAAAG 135329 29 100.0 32 ............................. ACGAGCATACGGAGGTGGTTTGGGTACATGAA 135390 29 100.0 32 ............................. GCGTAACCCCAGCTTCTCTAGCATCTGCTGAG 135451 29 100.0 33 ............................. ACCGCTGGCACTGGCTGGAGGCTCGCCATTGGG 135513 29 100.0 32 ............................. CCATCAACCCTGATTTCAATACGCACGACGAT 135574 29 100.0 32 ............................. TAAAGTACCAATAGTACATATTTAAGATAAAA 135635 29 100.0 32 ............................. ATTACCAAAGGCAGCCTGAACGGGTTTCGCGT 135696 29 100.0 32 ............................. AAACCAGACCCGGCGTTGGATAAGCCTCTGCC 135757 29 100.0 32 ............................. ACAGCCAGATCAGTGGCGTCTTTATGATCTCG 135818 29 100.0 32 ............................. CGAACAATTTGAACATAACGAGAACCCCGCCA 135879 29 100.0 32 ............................. GCGGCGCAGCGGCTGCGGCCATCACGCCACGC 135940 29 100.0 32 ............................. CCGGGTAAAACCATAGGAAAAATCGGGTATGC 136001 29 100.0 32 ............................. TTTCGTGGAATTGAGATATAGCGACTGACCGA 136062 29 100.0 32 ............................. AACGAGGGGGCAATTGAGCCGGACGTTGACGG 136123 29 100.0 32 ............................. ATATTGAGGACTCGATATCGATTGCGATGATG 136184 29 100.0 32 ............................. TTGCCCGACCAGGCTTTCACTGACGTGCTCAA 136245 29 100.0 32 ............................. GCATACGGCAGGATTTACGAAATTACTATCAA 136306 29 100.0 33 ............................. GGTATTCTTTGTCTGAGTAACTGCCTTTTCTAA 136368 29 100.0 32 ............................. GCGATACACACAGCCGCCGATCTTTCCGTTTC 136429 29 100.0 32 ............................. ATCCTAAACAACAGCTCGCCTATTTGGCCGTA 136490 29 100.0 32 ............................. ATATCGCCGCAGCACTCACGCAGTTTGCCACC 136551 29 100.0 32 ............................. CAGGGATAGTCAGCAGCGTTCGCGGTCCCGGC 136612 29 100.0 32 ............................. GTTTGAATAGTGCATTCATTATTTGCGGGAAC 136673 29 100.0 32 ............................. AGCGGGGTCGGAGTTACTTTTTGTTTTCGCGT 136734 29 100.0 34 ............................. ATCGAATATAGACAGTAAGCTAAATTATGCAAGT 136797 29 100.0 32 ............................. GTGCGCGGCCCCATTTAGCAGGGCGTTTTGCG 136858 29 100.0 32 ............................. CGCATAGCCGAGCTGGAGGCGCGGACGGTGAA 136919 29 100.0 32 ............................. TCTCTGGCCGCGTTTAAATACTCAGTCGAGAA 136980 29 93.1 0 .........................T..A | ========== ====== ====== ====== ============================= ================================== ================== 39 29 99.7 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTCCTTGACGCTGGCGAAATAGACCCTCCGCAGCCTGCGCCAGATATGCTGCCGCCTGCAATACCGGAACCGGAATTGTTTGGAGATGGTGGTCATAGGGGGCGTGGTGGATGAGTATGGTTGTCGTTGTAACGGAAAACGTTCCGCCGCGTCTGCGAGGGCGTCTCGCCGTCTGGCTGCTGGAAATTCGTGCGGGTGTTTACGTTGGTGATACCTCTAAGCGAATTCGGGAAATGATTTGGCACCAAATCATACAGTTGGGCGGAGCGGGAAACGTTGTGATGGCCTGGGCGACAAACACGGAGTCAGGTTTTGAGTTTCAAACCTGGGGAGAAAATCGCCGTATTCCGGTAGATTTGGATGGACTTAGACTAGTGTCTTTTCTTCCTTTTGATAATCAATAGGTTGAGTGTTCTTTAATAAAACGGAATTGTTGTTCCCAAGTTGGTAGATTGTTACTTGATGAAAATTGCAATAGAAAACAGTTATATATATTTAGT # Right flank : ACTTTGAAAGCAGAAATATTATGGGGCTGGATGGGTTACGAGGATTTTCCCGCTTTTGCCAGTTCTTTTACCAGCGGGAGCATAATGCGTACCACGTCGCGGCTACGGTGCTCTATCCTGCCCGGTAAGGCTTTATCGATATGCTGCTGGTTATCCAGTCGCACATCGTGCCAGCTGTTGCCTGCCGGGAACGAGGCGCTTTTGGCGCGCTGTTGATAGCCATCTTTCTTGCCCAGACTCCAGTTGGTTGCTTCAACGGAGAGCACGGCAATGCCTGCGTTGTCGAAGACCTCTGCGTCGTTACAACATCCAGTACCTTTCGGATAGTTTTTGTTCAGTCCCGGATTGGTGCTGGCTACGATACCGCGGCTGTGCGCGATGGCCAGTGCCCGGTCGCGCGTCAATTTTCGCACCGCTTCCGGGGTTTTCTTACCGCTATTGAAATAGAGCTTATCGCCGACGATCAGGTTATCGAGGTTGATAACCAGCAGCGTATTTTT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //