Array 1 31284-33246 **** Predicted by CRISPRDetect 2.4 *** >NZ_SHTI01000027.1 Bifidobacterium longum subsp. longum strain MCC10119 contig0027, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================= ================== 31284 36 100.0 28 .................................... CCAGTGACGTGCATGACGCGTCCGGCTC 31348 36 100.0 29 .................................... CATGACATGGCCGCATATGGTGTCGTGAG 31413 36 100.0 28 .................................... AACCTGTTGGCCTGGTCCCAGTCGCTCG 31477 36 100.0 28 .................................... TCCACCGACGTGATGGACAACTACACGA 31541 36 100.0 28 .................................... GAGGCCCGCGACCTGATTTCCAGCGGCG 31605 36 100.0 28 .................................... GCCTCATGATGAAGAGTCGCAAATCATC 31669 36 100.0 29 .................................... GTGAGCTTGTCCGTGTCTTTCATCAGTGG 31734 36 100.0 28 .................................... TGTTTACGCTCAAAAAGCACATTAGATT 31798 36 100.0 28 .................................... CCGAGGCCGGTAGGGTTGCGTGTCTGGT 31862 36 100.0 28 .................................... TCTCCCAGTTGCTGCCCCTTGGCGTCGA 31926 36 100.0 28 .................................... CGTATTCATCGTGGCCTCTTCGCGGTTT 31990 36 100.0 28 .................................... CGTACATGATGGGGTCCTTGACCTTGTA 32054 36 100.0 28 .................................... TTGGTGGTGTTGGGCGTCCGGCGCAGAA 32118 36 100.0 28 .................................... AGGTCGAGCGCCTCCTGCCATCCGGCCT 32182 36 100.0 28 .................................... ACAGTATTATTGTCCTGATATTCATGTC 32246 36 100.0 28 .................................... TCCATGACCGCGTCCATCACCTCATGCC 32310 36 100.0 28 .................................... CGTTCCCCAGTGGGGTGAGTGTGATGCC 32374 36 100.0 29 .................................... ACCGATTGCAACGCGAATATCCCGGGTAT 32439 36 100.0 28 .................................... TCCTGCAACTCCTCCTTGCGGGCCTTCA 32503 36 100.0 28 .................................... GTTGTTCCGGGAACAACTGGGAACAACT 32567 36 100.0 28 .................................... CTTGCCTCCGTTCTGCATCCAGCTGTCG 32631 36 100.0 29 .................................... ACGCGGCGAAGAATCTTGTTATCGCGGCT 32696 36 100.0 29 .................................... GTCGCACGTGGCATGGCATGTTGGCGAAC 32761 36 100.0 29 .................................... TGTTGAGGGGAACCGTATCAAACCTGATT 32826 36 100.0 28 .................................... TGGTTTCCGTGCCGCATTGGTCGCAGTA 32890 36 100.0 29 .................................... TCATGGGACTGTGAGCGGCGGCGGCGTGA 32955 36 100.0 28 .................................... TAGAAGTGCAGATTCCGTTCCTGCAAAC 33019 36 100.0 28 .................................... AGGACGTGCAACGCAAGTATTTCAAGAT 33083 36 100.0 28 .................................... TCGTCGATGTGTTCCAAGAGGTTTGGTG 33147 36 100.0 28 .................................... TATTGTTCGGGTGCGATGGTGATGATCA 33211 36 86.1 0 ..............................TTG.AT | ========== ====== ====== ====== ==================================== ============================= ================== 31 36 99.6 28 CAAGCTTATCAAGAAGGGTGAATGCTAATTCCCAGC # Left flank : ATTCAACGGTTCCGGTTTGACTATACCGAGCTCATTGAATGATTTTGCGCAGCAATTTGGTTTATATTGCGAAGGCAAAATCGACAGGTTGCAGGTTCCCGAATATGTAGGCGAGTCATGAAACGCGATGAGGACAGTGGCGGCATGTGGTGCTTGGTGATGTTTGATTTGCCGGTCAAGACAAAACGGCAACGGCATGCTGCAACTGTCTTTAGAAATATGTTGCTCGACATGGGATATGGAATGGTGCAGTATTCCGTATATGTGCGGTATACGCCTACGCAATCGGGTAATAGGGCGACGGTCAAAATGATTAAAGACAATCTGCCAGCTAATGGCTTAGTTAGAATTTTGCATATTAGCGATCATCAGTGGTCCACGGCGGCCCGATTTTCTTCTGGAAAACGTGAGATTGAGGAAGAAACGCCTGACTTTCTCACGCTTTTTTGAACGTAGGAGAGTCTGAAAAGATTGAAAAATAGCCCTTCTTGATAGGCTAT # Right flank : TGCTGGAATGCTTGGGTTGATTTGGCTGATTTAGCTGTGATGGCCGCTGCGGGAATGGCCCTTGCGCGGTTGGCGGCAGAGGTTGCGGCGCGGATTGCGGCACTGATTGTTGTGCCAATTGCGTCTGCGGTGAAAAATATGGCGACGGCTGTGTCTGACTGTTTATCGGCGGATGTTCCGGCTCAGGTTGTGGCTGGAATGGAGAATATTGCGGTTGCGCCATTGTATGCCCCTGCCCCTTCATTGCCATTTCATTGGCGCATGGCGAGGGCTGAAAACCAAGATGATGAATCCTGCATGAGTTATCCGTGATTCCTGTACGTTGGTACAGCGCGGAAGGTTGAGCAGCCGACATATGCAGGCTTGTCGGTTCAACTGAATATCTTTAAACTATGACTTCCAATACCCTTCGTATGTCAACCATGTTCCTGCGCACCCTGCGCGAGGACCCCGCTGATGCCGATGTCGATTCAGCCAAGCTGCTGCAGCGCGCCGGCTAT # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CAAGCTTATCAAGAAGGGTGAATGCTAATTCCCAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.50,-0.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [63.3-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA //