Array 1 139219-138849 **** Predicted by CRISPRDetect 2.4 *** >NZ_FOZH01000003.1 Enterocloster citroniae strain NLAE-zl-G70, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 139218 33 100.0 33 ................................. TACTTCAAGAAGAGCTATCTACTGTCAGAAATC 139152 33 100.0 35 ................................. CAAAACACAGTGTGTGCCCACGGCAACACCTCCGC 139084 33 100.0 36 ................................. CCTGCACTTGGCCCTCGTCTGGCCGGGAAAGGCTGA 139015 33 97.0 35 .A............................... CAAAACACAGTGTGTGCCCACGGCAACACATGATT 138947 33 100.0 34 ................................. TCTGCGCATGGCGGTTATAAGTCCACCCATGCCT 138880 32 81.8 0 ..............A.........C..-.T.GC | ========== ====== ====== ====== ================================= ==================================== ================== 6 33 96.5 35 GTCACAGTCTGCGAGGACTGTGTGGATTGAAAT # Left flank : GTCCATATTCTGTAGGGAAGGTTAATGCTTATATCAATTCCTTGAAAGACTTGTTTTCTGAAACTTTAATTTGGACCTTATCTATCATTACGGAAACGAGAAGAACATTAAAACATAAAGATAGTGAAGAAATCAAAATTGTGGAAAACGATAAGCTGGAGAATTATCATTTAAGTGATCTTGATATCAGAAATTTAAAAAAATCTCTTTGCTCTCCTTAGCGGTTCAATTGTTAAGTGTATGTTTACATATTATGGGATTGGAATAAATATTGCTTTGGGGTACAAAACTGAAAGTTTGGATTAAATATTATCAGAAAAAGGGAATACAAGTATTATGGTGCGAATCCCAAGCAAACATAAAATGTCTAGGAGATTCGCACCAAAATAAAGCACATAATATTTGATTTCGAGAGAAGATGTAGTATAATATGAAAAGAGATTTGTGCATTGTGTATGAGGGTAAGTTGTATTTAATAGTAAATATCATGCATAATTGCA # Right flank : AGACTTGAACTTGGTAATTTTTCAATTACGATCATACCAAAGGAAAAATGTCGGGGTGTATGAATTAATTTCATATACCTCGACATTTATTATAGAATCATCTTATCAATTTGAAAGTCACAAAAATCGAAATCCCCTCAGAACGCTCCATCACACTTCCTGTCTAAACATCACCCGCGAAGCGTGGGCTCCGCCCCGGTGGATCCTGTTGTGGGCTGTTTTGATCGTCACACTGTTAAAGCCATCTCTGGTGTTCCGGTTTGGAAAGATAAAATTTTTTGCACTGGAGGTTATTGTGACTCTCAGGCAATGACCTTTGCAAAAGGTGTGGGACAGTTTGGTAGTACGGATTTTAACAGGGTAGATCTGTCCCGGTTCCATAAAGTCCGGGTGTTCAAACTGGTTACGGTACCGTACGCTGAGGACACCGTCTGCCAGTTTCATGGAACGTCCCTCCCTATCCACATCCGTGATGCGCACGACCAGATCCGTATCCTCAC # Questionable array : NO Score: 8.88 # Score Detail : 1:0, 2:3, 3:3, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACAGTCTGCGAGGACTGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.52%AT] # Reference repeat match prediction: R [matched GTCACAGTCTGCGAGGACTGTGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.40,-4.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 1384513-1385086 **** Predicted by CRISPRDetect 2.4 *** >NZ_FOZH01000001.1 Enterocloster citroniae strain NLAE-zl-G70, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =================================== ================== 1384513 33 100.0 35 ................................. ATCATGATGGGCAAGGAATATGTGTTGTAGACATC 1384581 33 100.0 34 ................................. ACAATTCTATCACCGGCCATTTTGCACATCATTA 1384648 33 100.0 33 ................................. AATAGCAAAAGTGTTTGATACCGCACAGATAAA 1384714 33 100.0 34 ................................. TTTCAGGTAGTCAGCCTTGTTATTTACCTGCAAT 1384781 33 97.0 35 ..................A.............. CAGTTAATTTCAGAATGTTACCCAAATTATAAAGC 1384849 33 100.0 34 ................................. TTTCAGGTAGTCAGCCTTGTTATTTACCTGCAAT 1384916 33 97.0 35 ..................A.............. CAGTTAATTTCAGAATGTTACCCAAATTATAAAGC 1384984 33 90.9 35 ................A.T...C.......... ATTAGAAATTAAAATCAGCATGCGGAATTCTGACC 1385052 33 87.9 0 ............A...AA.........A..... | GT [1385076] ========== ====== ====== ====== ================================= =================================== ================== 9 33 97.0 34 GTCAGCTTCCGCGAGGGGGCTGTGGATTGAAAT # Left flank : GCAGGGAATGAGCGGAAGCCCGATCATACAGGATGGGAAGCTGGCCGGGGCGGTGACCCATGTGTTTGTGCAGGATGCGAGCCGGGGGTATGGGATTTTGATTGAGAATATGTTGGAGCATTGAGGGTGAGGGAGGATAGAGTGGGCATATAGGTGCTGTGATCCTGCGTTCTTGGCTCTTATAAGCCTTTGTCCACTCTATCTTATGGAGTAAAAATTTTTGGTGCTTAGACGAAGTAGTGAGCGGATAGAGGAAGAGATGTAAGGGGAGCAAGATTTTGAACCATAATTTTGGTATATAAATACTTGATAATGTAAGTTACTATATTGGTGCGAATGCCAAGTGCACATGAAAAGCATAGGAGATTCGCACTTGGTTTTTAAGAAAAATTTGAGAAAAGAGAATAATTTAGATATCATGGGTTGTAAAATGATTAAGAGAGTTGTATGATTTGTATAGAATATGTCTTGTATAAAAAAGAAAATTAGACATATTTGCT # Right flank : TCCATTGTAATATTGATGTCGCTGCTCCCTAAACGGTCAGCCCCAGCATAGGTTAATTCAATCCGAATAAATTAAGTCATATAATATAAAAAATATTAAAACATCAGATGAAAGCACTATTCTGATAAACCCGACTATCCTGTTCTTCCAGCGTACCGAATAAGTGATCGACATGCAAAAGAAATCAAAGAAATCAAATCACCCCAATACAAAGACCACATAGCCTCCCTCCATTAATTATTCCAATACACCCATCTTCCCAAAATAACATCTCCAATTTTTCCTAAAAAACAAAAACATCACTTCTACAATAAAGAAAACCAAACACACTCCCATTCCAATAACCCAAAAGTAATCACACGTTCAAACATCATATGCCTCAACTATCCATCACACTAAAAAGCATTCAACGATCATATACGGATCCTTCACCTATGTGGCAATGGAACAAAAGAAATTTTTATTCAGAAGTGGCGCAGCCTGCCTCAGAATATCATATC # Questionable array : NO Score: 9.11 # Score Detail : 1:0, 2:3, 3:3, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCAGCTTCCGCGAGGGGGCTGTGGATTGAAAT # Alternate repeat : GTCAGCTTCCGCGAGGGGACTGTGGATTGAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCAGCTTCCGCGAGGGGGCTGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.90,-1.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 79551-80639 **** Predicted by CRISPRDetect 2.4 *** >NZ_FOZH01000014.1 Enterocloster citroniae strain NLAE-zl-G70, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 79551 32 96.9 34 C............................... TCAGATGATCGCAGGAGACTTTAACCTGCGGGTC 79617 32 96.9 34 .G.............................. TCATTGTTGCTGTAATAGTCATACACTCGATCCA 79683 32 96.9 33 .G.............................. TCCCACTTCATCCCCCGAATATATCGGTATGTA 79748 32 100.0 34 ................................ CCTTTAAGGCCAGCAACTGTGGAGAGGAAAATAT 79814 32 100.0 34 ................................ ATGCCCCCATTACTATCAGCACGACCAGCGCAAA 79880 32 100.0 34 ................................ CTTTGCTGATCGGCTACTATACTGGTCTGCGAAT 79946 32 100.0 34 ................................ CCTTTTCGGATATCGGCTGTTGTGGCCGTGGCAT 80012 32 100.0 35 ................................ CGCATCCAACCAAACAATAGGGAGCGAATTTTACG 80079 32 100.0 35 ................................ CCCAGTTCCGGCCCGTTCCCGGTATTCCAGCAAGT 80146 32 100.0 33 ................................ TGTCCACCTATGAGTAATTTGCGCAATAACATT 80211 32 100.0 33 ................................ TGTTTTCTGTCTATGATTAATCGGGGATTATCA 80276 32 93.8 36 ..........C......A.............. TGTGATAAATGTCACGAGGGCATTTAAAATCCCCCT 80344 32 93.8 34 ..........C......A.............. TTTCCATGGTGGCTGCATCCGTTTTTGGTACAAG 80410 32 96.9 36 .................A.............. AGAATATTTTGGTTATGGAGTAGAGGGGAGAACTCA A [80427] 80479 32 81.2 33 ..........C...A.CA...CA......... CCCTTGACATTACGCCCAAATACGCATATAATA 80544 31 87.5 34 A.T.......-......A.............. AAAACTGATCGGGGGAGACTTGTCTACGGCGTTG 80609 31 84.4 0 ......-..........A..A...G....T.. | ========== ====== ====== ====== ================================ ==================================== ================== 17 32 95.8 34 GTCGTTCCCCTTGCGGGGACGTGGATTGAAAT # Left flank : GGATGCATATCCGCCATTTTGTGGAAGTGAGGTCAGAGTTTGCTGGTATTGATCACATATGATGTGAATACAGAGACCGCAGGAGGAAAAGCGAGGCTTAGAAAGGTCGCCAAACAATGCGTTAACTATGGGAGGCGAGTCCAGAATTCGGTATTTGAGTGTATCCTGGACAATGCGCAGTGTGTGATGCTGAAGTCATTATTGGCTGAAATTATTGATGAAGAGGTCGACAGCCTGCGATTCTATTATTTGGGTAATAAGTATAAAACAAAAGTAGAGCATGTGGGGGTTGATAAGGGGATTGCGGCAGATGAGACATTATTTTTGTAGTGCGAATGTGAAGCACACATGAAAAGTACGGGGGATTCGCACCGGAAAAAGTGCACAAAAGGTGCTTGGTTTGGGAGGGAGAGGCGATGATTTTGCTGTGTGGTATTCAAAGAAATGTATAGATGATATAAAAGTGTGATTGTTTTGTGTTATGATATTGGATATATTTG # Right flank : TTGTAATATGGCATCTATAAAAAGGTATATGGAAGATATTGATAGAGAAAGATATTAATAAAGAAAGATATAAATAAAGAAGTATCTTTGCAAAGGGATACCTCAAAAAGCGGGGAGTACAATATTTTCGGCCTAAGAATATCCTTGACAGATTGGAGACAGCAGTATTCGTCTGTTTGAAGTCATCTAAGATGATAAAATATGCAGCGATTATGGTATTTGGAGGAAAAATGGAACAGTTATCTATATTTGAGTGTATAAATGGAACAGAAGAAAATGGAACCCTTTCCACGGATGAATTGGCTGCAATTCATCCACGGATGGTTTCGTTATTTAGCGGTTGCGGCGGATTGGATTGGGGATTTAAAGAGGCTGGATATGATATTGTTTATGCAAATGATTTTGATAAGGATGCACAGAGAGTGTATGAGGCAAATTTTGGCGAGATGGACGAAAGAAGTATCCTCGATGTACCGGCAGAGGAAGTGCCGGACTGCGAT # Questionable array : NO Score: 5.80 # Score Detail : 1:0, 2:0, 3:3, 4:0.79, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.75, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTTCCCCTTGCGGGGACGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [5,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.20,-9.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-17] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.74 Confidence: HIGH] # Array family : NA //