Array 1 174256-171175 **** Predicted by CRISPRDetect 2.4 *** >NZ_FWJZ01000005.1 Klebsiella pneumoniae strain VRES0178, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 174255 29 100.0 32 ............................. TTGACCTCGCCGCTTCCGGCGTCGCCTACAAA 174194 29 100.0 33 ............................. TGCATCAGGAGTGTTGGATACTCAATTCCAGGC 174132 29 100.0 32 ............................. CCTACAGTCACAGCAGGCGGCCAGCACGTGGG 174071 29 100.0 32 ............................. CTCCGGGCGAATTTCGCGCCCGTCTACCGTCG 174010 29 100.0 32 ............................. TCGGAGATCAGCACCGACCACCACAACACCCC 173949 29 100.0 32 ............................. CACCACCATCATTAACCCCTGAAGAAGTGGGA 173888 29 100.0 32 ............................. TGTTACTAACCCTTCATGTGTGATACTTTCTA 173827 29 100.0 32 ............................. ATTTCTTCACCTGCATAGAGCAGTTGCGCCAT 173766 29 100.0 32 ............................. GCACCGTGGCCGCTGGCGACGATTACAGGATA 173705 29 100.0 32 ............................. TAGAGAATGCAGCCCGCGTGAGATCCATTGTC 173644 29 100.0 32 ............................. TGACGACACCTGACTGGTGCAGCGCCCGGTCA 173583 29 100.0 32 ............................. GGCAAGACGCGCAAAAAGAAAAATCATTTCAG 173522 29 100.0 32 ............................. GTGATCGGCCCGGCAATGCGTGAGCTAATCAA 173461 29 100.0 32 ............................. TTGAGTGACAGAGAGATTGACCGCCTTGTTTT 173400 29 100.0 32 ............................. CGTTTAACGCAGTGCGAAAAATTACGACACCA 173339 29 100.0 32 ............................. AACTGAATGTTCCAAATCCGGTTGGACGACCA 173278 29 100.0 32 ............................. TTCAGCAGCGCGCTCGTCCCCCTCCTGTCGGA 173217 29 100.0 32 ............................. CTCTACTACGATAACGGATCCCACGCGGGCTG 173156 29 100.0 32 ............................. GCTGCCAGCCCATTCCGTAATTGCCTGTTTCA 173095 29 100.0 32 ............................. TTTCTGCAAATCGAGTTGCCAGCGCGCCACGC 173034 29 100.0 32 ............................. GTGGAAATCAATTTTTGTTTTGGCCAGCGCGC 172973 29 100.0 32 ............................. GCCTCCTCCCGTTACACGGACGGCATTGACCC 172912 29 100.0 32 ............................. AGATTGAGCCATATCTATCACCGCCTTCGCCA 172851 29 100.0 32 ............................. ACCGGGCATTAAATTTGGTCTTCTCGTCCACG 172790 29 100.0 32 ............................. GCTGGCCGGAGTGTCGGTCATCGCCAGCCCCA 172729 29 100.0 32 ............................. AACAAACCGATCGCTCGATCAATCGCGTTAAA 172668 29 100.0 32 ............................. ATAATACTGTATACATAAACAGTATTTGAGGG 172607 29 100.0 32 ............................. TGCTGCGCAGACAATGGTCGCTATTTTGAAAC 172546 29 100.0 32 ............................. CCGGGCGATCATGTCCGCACAGTCAAACGCTC 172485 29 100.0 32 ............................. ATGAGTTCGTTCTGCCTGATAACACCCGCCGC 172424 29 100.0 32 ............................. TATACCGGCAATCACTGACGTCAACTCAGAAG 172363 29 100.0 32 ............................. GTACCGAGGTCAATGACGCTAACGGCCTGCAC 172302 29 100.0 32 ............................. CGCGCGCGCTGATCCTGGAGGGATACCGGGAC 172241 29 100.0 32 ............................. CTGAGTTCGTGACGTTTACCTGCGGGGAAGAC 172180 29 100.0 32 ............................. ATCCAGAGCTGACGGCATTCACGTTTGACGGC 172119 29 100.0 32 ............................. AGCCGATGCCTACAGTCACAGCAGGCGGCCAG 172058 29 100.0 33 ............................. TGTATTTCTCGGTATCCGTGGAGCGGTTGCCCC 171996 29 100.0 32 ............................. GCGAACATCCCCGTATAGGTGCCGTCTCCGGT 171935 29 96.6 32 A............................ GAGCTGGCGGTGTTTTTCTGTCAGTAGACGAT 171874 29 100.0 32 ............................. CGCTCTTCTGGTTGATGTGGCATGCCTTATAG 171813 29 100.0 32 ............................. CTCAGCCTTCACCTGCTCTTCCAGTTGAGCCA 171752 29 100.0 32 ............................. ATATTGAGGGGGTCTAGCGAGACGTCTAAGTC 171691 29 100.0 32 ............................. CCTGACGAAGACTTCGTTCGCCTCATGCAAGG 171630 29 100.0 32 ............................. CCACTCAAAAAAGGTCGAAGCCAAAAGGTTAT 171569 29 100.0 32 ............................. GGGAGCTTTCATTTGATCAGGCATTTGAGCAG 171508 29 96.6 32 ..............T.............. AGCGGCCGTTACGTAACTTTTCACGTAACAGC 171447 29 100.0 32 ............................. ACACGTCGTTAGGTGTTCCGTACTGGGAGAAA 171386 29 100.0 32 ............................. CCAGGCGACCGTATCTGGGTGCGTGAAACGTG 171325 29 100.0 32 ............................. CCGCAAGCCGTATCAACGAATTACTGCTCGAA 171264 29 100.0 32 ............................. ACTGATATCACCGAACTGGCTCGGGCCATGAA 171203 29 79.3 0 ...........ATTC..........G..C | ========== ====== ====== ====== ============================= ================================= ================== 51 29 99.5 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : GTCCACTAACGTTATCGATCCTGAGGGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [50.0-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //