Array 1 11682-12113 **** Predicted by CRISPRDetect 2.4 *** >NZ_FLNQ01000046.1 Hydrotalea flava isolate 4, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 11682 47 100.0 30 ............................................... AAAAACTTAATGATGTAGAAAATGTCATTT 11759 47 100.0 30 ............................................... ATTTAAACCTTTTAAATGCCACGGGGCCTC 11836 47 100.0 30 ............................................... TGTTTTATCTTTTTCCGCAACCTTATTGCG 11913 47 100.0 30 ............................................... TGGCCATGGAATTACTCAAACAATCCACCT 11990 47 100.0 30 ............................................... CTCTGTTTGGTAAGCAAAGAAAACAATACC 12067 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 6 47 100.0 30 GTTGTGATTTGCTTTCAAATTCTTTTTATCAGATCTTTGATAACAAC # Left flank : TTTCAAATCTTAGTCGGTCGAGAACCTGTTCTTCAGAGTATGGTAATAAAGTCATTTTTAGTCATTTAATATCGCAAAAATACAATAATAAGATTATTGTACAAATCTTATTTATCATAAAATTGTGTCAATAAGGAAATTTACTTTAATAATGTTGCTTAATTGTCAGAATTGGTTGACGCTAAAATACGCTTGCTATCAACAGTTTGCGTGTTGCCGTAGTTGGCAATTTCGGTGCACTTCACTGTCAACCTGCACAAAGGTTTGATAGTATGTCTCGACCTAAAAAAAGTTTACACTATTTGGTTAATAATCCTAACACAAGTTTACATATAATTGTTAATACTAAATAAGGTTAACATTAAAAATGTTAATTGTTGCCGAGTATTTGACAGGCAACTACACTTATCTTTGATAACAACGATAAAGGTGATTATAGTAGGGATGTGTCAAAAAACACTGGCTCGAAAGTAATCATCTTTATTTTTTAAAAGGTACTC # Right flank : TTCAGTTATTTTTGAAAGAATAACCATACTGTTGTGA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTCAAATTCTTTTTATCAGATCTTTGATAACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.34%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-3.80,-4.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [66.7-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.27,0 Confidence: MEDIUM] # Array family : NA // Array 1 3248-2107 **** Predicted by CRISPRDetect 2.4 *** >NZ_FLNQ01000080.1 Hydrotalea flava isolate 4, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 3247 30 100.0 37 .............................. AGTTTTTCGTCACTCTCATTAAGCAATGGGTTAGTGC 3180 30 100.0 34 .............................. GAACATCAAGCCGGCACTAATGATGATGATACAG 3116 30 100.0 34 .............................. TAGCTAATGTTAAAAGAATCGGCTGCACTGGTTA 3052 30 100.0 36 .............................. ACATTTGAACCTATTGACCATTTTGTATTGTCGTTA 2986 30 100.0 35 .............................. ATAACAAAAGCACTCTAAAAGAAATGCGTGATGCC 2921 30 100.0 37 .............................. ACAATATATGCATGGGCAAAAACAGCTACAAAGCCGA 2854 30 100.0 35 .............................. CAGGTTACACTTTTGCAGAAATTATTGAATGATAG 2789 30 100.0 35 .............................. TTGCTTAATGAGAGCGCGTAAAAATTTGGGGTATT 2724 30 100.0 35 .............................. TCTAAAGGTGTGTATCCATTTGCTGCACCTTTATT 2659 30 100.0 36 .............................. GGTAAAACATTAGATGCAAAAATTATTCATGAACCA 2593 30 100.0 36 .............................. TGTTTTTATAGTTTCAGAAATTAACGGCAAAGAATA 2527 30 100.0 35 .............................. ACGATTAAAGCAGCTGCACCATTAATTGCCGGTGT 2462 30 100.0 34 .............................. TAAAAGCGACAGTTTACGTTGTCAGCGTTGTTTT 2398 30 100.0 36 .............................. TTGTTTAAAATTTATGGGTTAGTAAAAATTAAATAC 2332 30 100.0 36 .............................. TTGGTACTTCAAAAAATAGAAAATGTACACACACCT 2266 30 100.0 35 .............................. TATCAAGGAAACATTAATCAATCAATTAGCGCTGA 2201 30 100.0 35 .............................. TTCAATAACCTCATTTGCTGTTTCGGCATCTAAAA 2136 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 18 30 100.0 35 CTTTTAATCGTACCATATTGGAATTGAAAT # Left flank : AATTAAATATAAATTAATATAAAAAATGTATATTATTTTAGTATACGATATAGAGCAAAAACGGGTAGGTAAAATGTTAAAACTATGCAGAATATATTTAAACTGGATACAGAATAGTGTTTTTGAAGGGGAGATTACAGAGGTAAAACTAAAAGAACTGATAGTCAAAGCCAAAATAATGATGGATATTAAAACCGACAGTTTAATCATTTTTAAAAGCCGACAGGAAAAATGGTTAGAGAAACAGGTAATTGGTAAAGAAAAAAATGAGGTAGATAATTTTATTTAACATCGTCTACCACCCTGTATGTAGCTTTAAGGCAACTACAAAAACATGTAAGTTTTTATCATAAAATAGCACCAATCATACTTTCATCGCATCGTCGAACAAAGGCTGCAATAATATTATCACAGATCGACTACTTTTTAGTGCAAAAACCTTAGTTTTACCTTATTAAATTACATTGTAAATCAACTGTTTATCATTTGCTGATAAGCGG # Right flank : GTTTATATTGGGTAACTAATTCCTGCTCTTTTTGTTGTACGGCAAAGGTTACTTCATTGCGTATTTTTTCCGGCATATCAGCAACCTGTATGCGTAAGTGTTTTAACTCGTCTTCCTTTTCACTGATTAGCTTTTCTCTTTCTTCCAGATTTTTTTCTACTACCAGTCTTTTTTCTTCCAGTTCATTTTCCTGCTTTATTTTTTTTGACTGGTATTCATCTTCCTCTTTTTTGCGGGATACAGTTAATTGATATTTATATTCTTCGGCCTCCCGCTGCAATGCTTTTTTTCTAAGTTCATCTTCTTCTTTCCATTGTTGTATTCTTTCTTTTTGTTCTTTTTCCCAAGCCAGTTTTTTTTCCTCCATTTCTTTTTCGAATGCCTGTTTTTTTTCTTTATTGACTGCAATGATTACGGCAAGTGATTCAGCATTGGCCTTTATGCCATATAAATCTTCTAAGTAAGCAGATTCATACTGTATGGCTTTCTGTAATTTTTCT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTTAATCGTACCATATTGGAATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [63.3-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.77 Confidence: HIGH] # Array family : NA // Array 1 8840-9040 **** Predicted by CRISPRDetect 2.4 *** >NZ_FLNQ01000057.1 Hydrotalea flava isolate 4, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 8840 47 100.0 30 ............................................... ACCCCCATCCCGCATTGTTTCAGCGCCGAA 8917 47 100.0 30 ............................................... GTCGTGATCTAAACAGAAAAGATACTATTA 8994 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 3 47 100.0 30 GTTGTTATCAAAGATCTGATAAAAAGAATTTGAAAGCAAATCACAAC # Left flank : GATGACAGACTGTTCCCTTTATGCCCAGGCACAATAACACATCCGAACGTTTCAATGCCTATCGTATTATGTGGATAATGGTATTTTTCGATTTACCTACCGAAACCAAAACAGAGCGAAAAACGGCACAAGAATTCAGGAAGAAAATTATGGCCGATGGCTTTGTAATGTTTCAATTTTCCATATACCTGCGGCATTGCCCCAGCATGGAAAACGCCGCCGTGCATATAAAGCGGGTTAAAAAAATATTACCTGAAAAAGGGCATGTGGGCATTATGACCATTACCGACAAACAATTTGGGATGATGGAGCTATTTCAGGGTAAAAAAGAAGCGCCGGCACAACCCATACCCCAGCAATTAGAGTTATTTTAATGCAATATAACAAAAATAGAAAAGTAAAAAGGCTGCCCTGCCAACTGCAGGCACAGCCATTTCAATCATTTTTTTCTTTCTATTTTCTTTGAAAACCCTTACAGTCATTGTATTACAGCATTTACT # Right flank : AGACCTTTATGGCTCCCGTATAATTACCTGTTGTTAC # Questionable array : NO Score: 2.67 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTTATCAAAGATCTGATAAAAAGAATTTGAAAGCAAATCACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.34%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-4.00,-3.80] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [73.3-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.27,0 Confidence: MEDIUM] # Array family : NA //