Array 1 7797-7281 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJMM01000024.1 Streptomyces cacaoi strain NBRC 12748 sequence024, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 7796 29 100.0 32 ............................. ATCGCTGCACGGCTGAAGATTTCGCTCGGGGC 7735 29 96.6 32 ............................T CCCTCCGCACCGAGGAGACGTGATGTCCGTCA 7674 29 96.6 32 ............................T GTGCACAGGTGTCTCCCACGGATAGAGCGGTC 7613 29 100.0 32 ............................. GTCGACGGGTACCGCCTCGTCTGCTTCGCCCG 7552 29 100.0 32 ............................. CCCAGCAGGAGAAAGGAAGCAGATGCCCCGAT 7491 29 93.1 32 .....................G......A GCGCGCAACCCCCCCTGCGGGGGTTCGGCATT 7430 28 93.1 32 ........A............-....... AAGAAGAGGATGAGAGAGGCGCCGAGTCCGGT 7370 29 96.6 32 .....................G....... GCGGCGATCGAGCCGTATGGCATCGCGGACTC 7309 29 82.8 0 .............C.......C...A.AT | ========== ====== ====== ====== ============================= ================================ ================== 9 29 95.4 32 GTGCTCCCCGCACGCGCGGGGATGGTCCG # Left flank : TTCGGCGCCTCGCTGAAGATCCCTGCCGCCAACGGGTTCTGGATATTCGACGAACGGCTTGTGATCGCGGAGGACTGGCATGCCGAGTTGCGGCTCGACGACGCCGACAGCATCGCCACCTACTCGCGCGTCTGGCGCACTCTGCGGGAATCCGCCGTGTACGGCGCCGACGCACACAACGTGATCAATACGGCACGGCGGGAACTGAACGCCCGCTGAAGGGTCTTCGGCTGGCGGGACGGCGGCGCGCTGACCGAAGGGCCGAGCCCTCAACAGGCCGACCACGCCCACCGCTACCTGTACGAACGCCACCAGCACGGCCCACCGCGCCCACCGCTCCGCCTGCTCCACTACTGCCTCCTCGGTCGTTGGCAGGACCGTACGCAGGACTGGCTGTCGGGCGTCGTGAGTTGTCCACAGGCGGGCAGGTAAGTCGTACCGGCAGCGGCGAGGTGATGCTGAATACGCCATTCCGCGAGTAACGTCGCTGGTCAGGAAGT # Right flank : GCCGAAATCGCCCCCGCCCGGCCAGGTGCGCCCGGCCACGTGCGCCCGGGCAGGGGCATTCAGCCAGCGAAGCCGAGTAGTCCCAAGGCGAAGGCGCTCCCAGCGAGGGCACGAGGCAGGGCGCGGTATGCGGATGCTCGCCGCGCCGGGGGCGGAGGGGAGACGGCGCCGACCCGCACCCACAAGGCCGTCTCCCGCCGCGTCCCCCCTCGGCTGAGCGGAGCGCCGGGCAGGGGCGCGTCCAGCCGAGGCGGCACACCCGGCAGGAGCCTCATCCCCGCCGGGGCGGCATACCCGGCAAGAACCCGTCCCAGGCGCGCGACACACCCGGCAGGAGCCCCATCCCAGGCGCGCGGCATACCCAGCAGGAGCCCCATCCCAGGCGGGCGAGCAAAACCCGGCAAGAGCCTCATCCCAGGCGCGCGGCACACCCAGCAGGAGCCCCATCCCAGGCGAGCGGCAGAACCCGGCAGGAGCCTCACCCCAGGTGGGCGGCATGC # Questionable array : NO Score: 5.62 # Score Detail : 1:0, 2:3, 3:0, 4:0.77, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.59, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCACGCGCGGGGATGGTCCG # Alternate repeat : GTGCTCCCCGCACGCGCGGGGGTGGTCC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCCCGCGCGGGGATGGTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [20.0-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 12170-11593 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJMM01000024.1 Streptomyces cacaoi strain NBRC 12748 sequence024, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 12169 29 96.6 32 A............................ CTCACCGCGTCGTTCGTGATCTCCAGATCACC 12108 29 93.1 32 A...........................C CAGGCGTCCGGGTCGGTGCGGCACGGCTCGCG 12047 29 93.1 32 A...........................A CGGAACGTCTTCCCCGACCCCATCGGGCCGAT 11986 29 93.1 32 .....................G......A GTCGCGATCAGGTTGGCTACCGCCGACCTGAT 11925 29 96.6 32 .....................G....... AGCGAGTTCTACCCGCTGGGCACCGGCGGCCA 11864 29 93.1 32 ............T........G....... GAGAACATGTCGATCCGGGTCTCCCTCACGGT 11803 29 96.6 32 ............................T CCCCCGTTCTGAACACGCCCGGGGCGGCCCCC C [11794] 11741 29 96.6 32 .............C............... CTCGCCGCCTCATCCGAGCCGCCGCCGGTCGC 11680 29 100.0 29 ............................. TCGAGGCCGAGCGGAAGGCCCGCGAGGGC 11622 29 75.9 0 AA.G.................C...A.AT | G [11616] ========== ====== ====== ====== ============================= ================================ ================== 10 29 93.5 32 GTGCTCCCCGCACGCGCGGGGATGGTCCG # Left flank : GATCGCTGAGCACAGCTTCCGCACGGCAGTGATCGGTTCCGTGTTCGCGATGATGGAGGGCGCCGACCCGGGCAGGGTCGCGCTGCTGTGCACCTTCCACGACACGCAGGAGACCCGGGTCGGCGACATTCCGTGGATCGGGCGGCGGTACCTCACGGCGGCGAAGAACGAGGATGTCACCCGCGACCAGGTCGCCGACGCACACCCGAAGGTTGCCGCCGGCATTCAGGCCGTAGTCGACGAGTACGAGACCGGCGACTCGATCGAGGTACTCGTCGCTCACGATGCCGACAAGCTCGAATGCATGATCCAAGGTCTTGAGTACCTGGAGCAGGGCTACCGGAACGCTCGCGAGTGGGTCGACAGCACGCGAGCGAAGCTCAAGACCCCGTCGGCGATTGCCCTTGCTGATGCCGCACAGAACATGTCCTCGGTGGAATGGCAGCGCACCTATCTGCGGTAGGTGACGCGAAGGCGCGGAAAGCTGCTGGTCAAGAAGT # Right flank : GACGAAAGTGCCCCCGCCCGGCCATGTGTGGCCGTGCGGGGGCATTGTCAGCGTGTGAAGTCGAGTAGTGCCAGGGCGAGGGCGCCGACACCGGTCAGCGCAGCCAGGGATGGCAGGGGCCAGCGGGCCCGCTCCAGTGTGCGGAGTCGGGACTCGTGGTCGGCGAGACCGTCGCCCCGCTCGACCGCATCGAGCCGTGCGTCCTGCTGGTCGAGGTGCTGCTCGTGCTCGGTGAGCCGCTGCTCGGTCTGGTCGGTGCGCTGTACCAGCAGCGCCAGGGCGCCGTCGGTGCGGGTGAACCCGACTTCGATCGTGCGGCGGATGCGTTCCAGTTCGACGGCGACGGCGGACGGGTCGGACGGGGGTGGGGCGGTGCTCAGGGGGCGGCCTTGGTCTCCTCGTCGACGATGCCGAGGCCGAACCGGTCGAGCAGCCGCTCGACGGGCGGGAGGGCCATGACGCGGGCGAGTCCGCCCGCCACGGACACGACACACGGAAGC # Questionable array : NO Score: 3.66 # Score Detail : 1:0, 2:3, 3:0, 4:0.68, 5:-1.5, 6:0.25, 7:0.01, 8:1, 9:0.22, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCACGCGCGGGGATGGTCCG # Alternate repeat : TGCTCCCCGCACGCGCGGGGGTGGTCC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCCCGCGCGGGGATGGTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-9.00,-9.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [33.3-40.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 61690-62388 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJMM01000006.1 Streptomyces cacaoi strain NBRC 12748 sequence006, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 61690 29 100.0 32 ............................. CACCCGCCACTGGAGATCGCCCAGCTCGGTGG 61751 29 100.0 32 ............................. GCCGCCGCTGCTGCTGCGGCCGGTGTCTCCGA 61812 29 100.0 32 ............................. GAGGAACCGGCTCCGAGCTTGTCGGCGACGCT 61873 29 100.0 32 ............................. TCCACCTGGACGCTCGGGGAGAGCTGCACCTC 61934 29 100.0 32 ............................. GGCTGAGCGTGAGACCCCGAGCTGTTTGGCGA 61995 29 96.6 32 ............................G CCGGCCAGCGGCACCGTGACGTAGGGGCTCTG 62056 29 100.0 32 ............................. TGCGGGAGCGGGGCCACGCCCTACCCGGGTCC 62117 29 100.0 32 ............................. CCTGGGTCTGCCACTCGTGCTTGCGGCCGACG 62178 29 100.0 32 ............................. CAGGCAGACCTCATAGACTATGTTCCCTTCCC 62239 29 93.1 32 ........T.....G.............. ATGTCTTCACCATGCGGCCACACCAAGGCCGA 62300 29 100.0 32 ............................. GACCCGATCTCGAAGATTGCGCATCATGAGGC 62361 28 75.9 0 .A.T.......C.....A...G.A.-... | ========== ====== ====== ====== ============================= ================================ ================== 12 29 97.1 32 CTGCTCCCCGCGCACGCGGGGATGGTCCC # Left flank : CCGGCGGAGGAGCGAACACCTAGTCGCGGCCGCAGCCCCGAGAGCCCGTGATGCACAGGTAGAGGCCAGAAGAGCCCGCGTTGAGGTTTGATCCACGAGACCGGGTGCCCCGGCTCCCGCTCGTGTAGGGAGTCCTGTCTGCTGCCGAGGCGGCACCCCGATGCGTCTCCGCACCCTTGCGGTCACCCCTGCCTTCCGTAGGGTTGAGATGGCCAGGGTGAGGCAAGTTGTATACGAAACGCCAACTGGGTCCTTCGGACAGGTGTGTCGGAGTCACGCACGCCAGGGGAAGCGGAACGAGTCCCCGGGTGCTCCGGCGCCCGGACCGGGCTTTGCCGTTGCGGAGGGCGAAGAGGACGGGGCACGTATGTTGGAGGTTGCTGTACCCGCGATGTTGCGGCGGCCGCTGACCCTTGTGTGACTGGATGGGAGGAATGCCTGAATCCCCGAAGGTTGCTCGAAACGGCCTTCCGGCCGGATAAACCCGCAGCTCACCGAGC # Right flank : CAGGCCCCCGGCTCAGGCCGGGTCCTCCAGGGCCTCGATGAGGAGATGGGACAGGCGGCGGAACTCCTCGGCGTTGGCTCTGTCGAACTTTTCCAGTGCCGGGGCCAGTCGGGCCTCGATCTGGGTGAAGGTCTCGTCGATCACCTTGTGTCCCTTGGGCGTGAGGTGGTTGTCCATCACGCGGCCCCGGGCCGGGGAGCGCTCGACCAGGCCCTCCTCCTGCAAGGTCCGGATGAGACGGCTGACGGCCTGCGGTGTGTGGACCGCGGCGCGCGCCAGCTCTGAAGCGGAGGCGCCGGGTGTCCGCTTCAGTTCGCGCAGCACCGTCCACTGCCCGAGGGTGAGCCCCAGTGGGTGGATGACCTGCTCGATCCGGTCGGCGAAGTGCTGACGGATGATCCTGGACAGCGCACCGATTTCGATCCCCTGCGGCAGCGGGTCGCCCGAGTTCTTCATCTTTGACAGTGTACTCGCCGCGTTCTATATTGAATCGCAGTTCA # Questionable array : NO Score: 6.11 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCACGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCGCACGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [36.7-25.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 22362-21966 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJMM01000008.1 Streptomyces cacaoi strain NBRC 12748 sequence008, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 22361 30 96.7 31 .............................T CCTGTAGATCGGCCCCGCTGACCAGCGCTGT 22300 30 96.7 31 .............................C AGATGGCCTCCGAGCTGGGAGTCTCCCCCAA 22239 30 100.0 31 .............................. TCACAAGGCTCCGGTTCACATCGCGGTTCAC 22178 30 96.7 31 .............................A GGCGCTTAGCCTCGTCGTCGGCGGTCAGCCG 22117 30 90.0 31 ...G..........T..............A GTTCTTCTGCGAGCGTGAAAGGCGCGGCCGA 22056 30 83.3 31 ...G.......A..T..A...G........ CGGGCAGGTCTTCTCGCCCTCGTGCGCAGGG 21995 30 86.7 0 ...G........TGT............... | ========== ====== ====== ====== ============================== =============================== ================== 7 30 92.9 31 GTGCTCCCCGCGCACGCGGGGTTGGTCCCG # Left flank : CTCACTCTCGGCGAATCTGCGCTGGCAGAGCGTCTTCGTCTACACCGTGCCGCCCGCGGCGAAGCAACAGGCGCTCACCGACGTCACGGCAGCCGTGGACGCGGGCGCCCTGCGCGTGGGCGAGGACGCCGGACTGCCCTTGCACCGCTTCCCCCTGGAACGCACCGCCGACGCCCACACAACACTCGAACAGGGCGTCACAGGAAAGGTCCTGCTCGACATCGTCTGACGCCCGACCCTCCCCTGCACACGTCTCCCAAGCGCTACCGTCAACTCCCGCCCGGCCTCTGTCACTTGTCACCGCGCATCCCTGGAGGAAAATGGCCCAGCACCGCCTACGAGCCGGTCCGGCAGCGGTGGAACGAGGCGGCCACGACGGAAACCGGGAGGACAACGATGAGCCGCGCTGGGCGTGTTCGCCCGACATCACCGAAAAGCCCGAGCTTGGCAAAGTGGGTAAAATCCGTGCACCGCTGAGAAGAAACCCCTGGTCGGCTCCT # Right flank : TGCACACCTCCCCGCAGATGCACGACGTGGCGGTGGCCCCCGCACGTGCGAGTCAAGCCGGAACTCCCCCGGCCCCCAGAACCCTCCCGAGCCCCCGCCCCTCCCAGCCCCACATGTAAAACGAACGTTGTACACTGGGGAGCATGGCTGGTACGCGAGCAGAGATCGTCTCCTCCGCTGAGCGGGTCTTCGACCGTCACGGCTTCGCCGGGACGGGGATGGACCGGCTGTGCGAGGCGGCGAGTGTGTCGACCCGGACGCTGTACAAGCACGTCGGCAGCAAGACCGGGCTGATGGCAGCGGTGCTGGAGTCGCGGATGTCGAGGTTCTTCGAGCGGTTCGACGTGCACAGCATCGAGGAGCTGTTTGAGGCTCTGGAGACCTGGGTCGCCGCCGAGGGAGCCAGAGGCTGCCTGTTCCTGCGTGCTCAGGGCGAGACCGGCGGGCTGACCCCGGAAGTCTCGGCGGTCGTCGCCGAGTATCACCGGCGCCTGCTGGAG # Questionable array : NO Score: 3.75 # Score Detail : 1:0, 2:3, 3:0, 4:0.65, 5:-1.5, 6:0.25, 7:0.01, 8:1, 9:0.34, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGCACGCGGGGTTGGTCCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGCACGCGGGGATGGTCCCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [28.3-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,5.18 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 9209-9726 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJMM01000073.1 Streptomyces cacaoi strain NBRC 12748 sequence073, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 9209 30 96.7 31 .............................A GGGCGAAACGGTGCTAAGGCAAAGGACACCA 9270 30 100.0 31 .............................. CGGCCTTCGCCGACTTGCTGTCGTCGCTCGC 9331 30 96.7 31 ........................A..... GCCGCCTGGAGGTGGTGCTCCAGCGGACGGA 9392 30 93.3 31 ........................A....C CGGTGCCCATACAGCGCCGCCGGGGCAGGTA 9453 30 93.3 31 ..........T.T................. CGTGCTGGATGGGCAGGCTGTCGTCCCAGAT 9514 30 96.7 31 ............T................. TGTACCACTTGCCCTTGTCCTGGGCGAGGAT 9575 30 93.3 31 .....G......T................. TGTACCACTTGCCCTTGTCCTGGGCGAGGAT 9636 30 96.7 31 ...............A.............. AGACTGCCGCGGGCGGCCCGATCGGGGCCCG 9697 30 83.3 0 .............AC......T..AT.... | ========== ====== ====== ====== ============================== =============================== ================== 9 30 94.4 31 CTGCTCCCCGCGCGTGCGGGGATGGACCCG # Left flank : CTGCACCCACCTCTACTGGCCCGGCGCCCACCACCCCCACCTCACCACCACCATCGCCTCGGCCCACCAGACCCTGACCCACCAGGCCCTGACCCACCGGGCCAACTCGCCCTGAAGCCCGGCTCCGTGGACAGTCCGGATTCTTGGGGGCTTGAGTGCTCGGGGTCGCCGCCCGGGACGCCCTTCCCGCTGGAAGAACCCGCAGACCCGGCCAGGTGGCCCCCTCTGCGCGCCGGGAAGGCCCCGCCTGCTGTCCCGTGCGGCACGGGTAAGCCTCGGCCGGGCCCGACGTGGTGCCGACGGGGGAGGGCGAACATACGTTGGTGCCCTGTGGCAGGCTGACTGTGCCCGGAGGGGCGGGCGGCAACTGCGCCGAGCCTGCTCACACGGACTGCGTCGATGGTTGTTGCCTTTTATGTCCCGAGTTGGAGGAAATGCCCGAACTCTCGAAAGTTGCTCAGAACGGCCATCGCGCGGGGTAAAACCGCAGGTCGCCGAGC # Right flank : GTTCGGCGGTTACGGCGAGGTGTGCGAGGGTCCTCGATCGGTCAACCGGCGTGGGCGCGGCGGCACTTCGGACAGCGGCACGGTGGCCAGGCCCCGCCCGCTACCGGTCCTCGGACGGGCCGTACGACGCGGCGTGGTGTCCAGGTGCGCCCGCCGTCGCGGGAGACGCGAAGGGTCATCCAGCTCACGGCTGATCTCCCAACGGCCGTGGTCCCAGAACTGCGGCTGCCGGCTCGCTGTTCCTCGCGTACTTGTAGCCGAAATGGCGAGTTGCGCGGGCCGATTGAGCTTCGCCCGTCGGCACCAACTCTCGACGCTGATCGGGTTCCGGAATGAGCTGTCGTGCATGCTGCCGCTTATCGACCATGGGTGTCCTCCCGGTGACGGATGGTGCGGTCACTCAACCCCGGGGCATCCTGGAGGGGCCACGAACCACCCGCGGACTGCATACGACGATGCGCGCAGCGCTTAGTGGTGCCGCATTCCGGACCCGTACCGCG # Questionable array : NO Score: 3.73 # Score Detail : 1:0, 2:3, 3:0, 4:0.72, 5:-1.5, 6:0.25, 7:0.01, 8:1, 9:0.25, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCGTGCGGGGATGGACCCG # Alternate repeat : CTGCTCCCCGCGCGTGCGGGGATGAACCC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCGCGTGCGGGGATGGACCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [38.3-28.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //