Array 1 543189-539997 **** Predicted by CRISPRDetect 2.4 *** >NZ_KE161016.1 Myroides odoratimimus CCUG 10230 supercont2.2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 543188 30 100.0 36 .............................. GTTAGACTCGGTGTTTGATTAGTTTTTAATGTTCCA 543122 30 100.0 36 .............................. CTAAATAGCGCGTATGGAGTTGTAGCCGGAGCAACA 543056 30 100.0 36 .............................. AGAAAAGCAAAAAGAGCAAAACAGACAGTTAGAGAA 542990 30 100.0 34 .............................. AAGGCTGTTTGTTTTTTAGTCTGGAGGAAATTCA 542926 30 100.0 34 .............................. AATGATGGTAACTCATTTTTTTGCACCAGATCCA 542862 30 100.0 36 .............................. AGCGAAGTAATAACAACCTTGCAAATCTTCTCTGTT 542796 30 100.0 37 .............................. ATAAAAAGTTTGATGCAGTTATACAGTTGCACAATGG 542729 30 100.0 34 .............................. TTGTAAAGTGCGTTACTGCTTTATTTCTGTAACG 542665 30 100.0 36 .............................. ATGTTAATCATTGCAGAATCATTCATATTGATCCCA 542599 30 100.0 35 .............................. ACGGCTGGATGGAATGGAGATGACTCGGAATTTTC 542534 30 100.0 36 .............................. CTGGATGCTCTTGCTCATCCAGTTCCTCCAGTATAA 542468 30 100.0 36 .............................. TATATATTTCTGCAAGCATTGAAGTTTGTGTATAAT 542402 30 100.0 36 .............................. TTACTTTTCAGATCGTAGATATTAATAAAACTAAGT 542336 30 100.0 35 .............................. AAGATTATTTTCACTTCGAGTTTAACTACTCTGAT 542271 30 100.0 36 .............................. TCAATTCCTTTTCGCATTCTTCAGTATCGTCAAAAC 542205 30 100.0 36 .............................. TAGCTTAATAATCGTTTAGATTATACTTTAATCCGA 542139 30 100.0 37 .............................. GCAGTTATAAGAACAGGTTTCTCGAAGAGAGATTTTA 542072 30 100.0 37 .............................. ATACTCCCCCATTGTCCACCTGTAACCTCTGTAATTT 542005 30 100.0 35 .............................. CTAATAATTCAGATCCGTTTTTAAAAGAAGCTCTT 541940 30 100.0 36 .............................. TTAAAATTCTGTGTCATAAAAGAATCCCCCTAAAAA 541874 30 100.0 37 .............................. ACATTAAGATCCTTCTCTCTTTGTATCTCTATTCGTA 541807 30 100.0 37 .............................. AAAACAGTTCTTTACAATTTTAATATTGAACCAGAGC 541740 30 100.0 37 .............................. ATGTCTCTAAATACAGCTTGAGTATTTATAGGGTCTT 541673 30 100.0 35 .............................. TCTATTTGAAAGGATGGTTAAAGCATACTAAAAAT 541608 30 100.0 36 .............................. GTGCTTGACGAATCAACTACTTTGCCTATAAACTCA 541542 30 100.0 36 .............................. CAGATGAAGGATTAGTAAGTACAGTTGTTACTTTAA 541476 30 100.0 38 .............................. ATATGAAGAAAATAAAAGAGTACTTCAGTTCTATGCCC 541408 30 100.0 36 .............................. GCAAACATGATTGCGAAATTTCAGCAGTAAATAATA 541342 30 100.0 36 .............................. CTGGATAAAGGGTTGTTAATAATTGGAAGCACTGGA 541276 30 100.0 36 .............................. ATTGATTGTTCAAATAGGGGGTATTAATAATAGTGT 541210 30 100.0 35 .............................. AAGTTTACTTTAATTATATTATTGTAAGCATTACC 541145 30 100.0 34 .............................. ATATTATCAGTAGTTACTAAACCACCTTCTTCAT 541081 30 100.0 35 .............................. ATATATATACCATTATGCGCTGGTAAATCTTTTTC 541016 30 100.0 35 .............................. ATGGGTGGGATGACAGGCACAGTTGTAGATATAAG 540951 30 100.0 35 .............................. TTCCTTGCCAGTTCTCTATTAAATTGGCTTGTTCT 540886 30 100.0 37 .............................. TCATTTCCCAGAGTGCTAAACTCAATTGCAACATCTC 540819 30 100.0 35 .............................. TTGTAAACTAACACTCCAGATCCAAAGAAAGTAAA 540754 30 100.0 37 .............................. GTGATAATAACGCCTGAATGTGTTATATTTTCTGCTC 540687 30 100.0 37 .............................. ATAACATAGCTTGTTGCTGTCTTGTTTATTCTATCGA 540620 30 100.0 35 .............................. GCTATCCTTACTTTGTCTATATATATATCTGTCCA 540555 30 100.0 36 .............................. CTATAATCTACTTTAAGTTTTATAGTTCTTCCTGAT 540489 30 100.0 36 .............................. TGGGGTAAGATTGATTTTGTTATTGGTAAAGAAATA 540423 30 100.0 36 .............................. GAACTTAATGAGGAGTTTAAAAACAGTGCTGGATCA 540357 30 100.0 36 .............................. TTTGATTTGCTTCGTATACTAATTTACTACCTACGT 540291 30 100.0 36 .............................. ACATACTTTCCATAATGCTCCATTAATATCTCAATC 540225 30 86.7 36 .......TC............A.......G ACATTATAAGGAAGTTTAAACTTCCCTGCTGGAGAA 540159 30 80.0 36 ...C...TCA...........A.......G AGTATAACTACTTCAGTATTATCAAGCTTAACATTA 540093 30 80.0 37 ...C...TCA...........A.......A GAGTATAACTACTTCAGTATTATCAAGCTTAACATTA 540026 30 73.3 0 ...C...TC............A.ACA...A | ========== ====== ====== ====== ============================== ====================================== ================== 49 30 98.4 36 CTTTTAACTGCACCATATAGGTATTGAAAT # Left flank : GAAATAGATTTAGGATTAAAAAAGGATTTAGAATCTCTAAACTTTTAACTGCACCATATAGGTATTGAAATATGGCTTGTTTAATGCCATTGTAGTTTTTATTTCCTCTTTTAACTGCACCATATAGGTATTGAAATTCCACTTTAAGGATTTGTTTTTTGATAACTTCTTTTCCTTTTAACTGCACCATATAGGTATTGAAATATAGATATCAAAACAGATAAAAAAGACCCGTTAAACTTTTAACTGCACCATATAGGTATTGAAATCTGGATGACCTTGCTCATCCAGTTCCTCCAGTATAACTTTTAACTGCACCATATAGGTATTGAAATGTTAGACTCGGTGTTTGATTAGTTTTTAATGTTCCACTTTTAACTGCACCATATAGGTATTGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNA # Right flank : ACACCAACAAAAAAAACGCACTATATAAGTGCGTTTTTCGTTAGTAAAAGGGTAATAATTGAAGAGAAAAAATATCTATTTAGCAAACTTCTTACTTGCAGCTACACAAAGAATCACTCCGAAAGTGACGTATAGCATCGTAGGGCTTACTTTTTCGTTTAATACTGTTGCCGCTAATATCATCCCTAATAGCGGTTGTAATAATTGGATTTGACCTACTGTTGCGATTCCTCCTTGTGCTAATCCTTTATACCAAAAGATGTACGCTAAAAACATACTCACAACAGAAATATAGAATAGTCCAAACCAAGATTCACCACTTACTAGAACTAAGTCTGTAGGTACCGTATAAATCATAATCGGCACTGTAAGAGGTAGTGAGATAATACACGCCCAAGAGATCACTTGATATCCTCCTAGTGTTTTAGATAGTTTAGCACCTTCTGCGTAGCTCTGACCACATAAGATGATCGCTAAGATCATTAGGATATCCCCGATAG # Questionable array : NO Score: 6.18 # Score Detail : 1:0, 2:0, 3:3, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTTAACTGCACCATATAGGTATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.00,-1.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [24-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-1.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,4.91 Confidence: HIGH] # Array family : NA // Array 2 545897-543354 **** Predicted by CRISPRDetect 2.4 *** >NZ_KE161016.1 Myroides odoratimimus CCUG 10230 supercont2.2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 545896 30 100.0 36 .............................. TAATGCTGAAATGCTTTCTGTTGAAGTACAAAGAAA 545830 30 100.0 36 .............................. TTAGATATTGTATCTATGGAGTATTTATTTATCTAA 545764 30 100.0 36 .............................. TTAGTAGAAAAATCGTGTATCATATCAGATAATTTT 545698 30 100.0 37 .............................. ATTGAATACAAACTTAAAAAATACTTTTGTAATAATC 545631 30 100.0 35 .............................. TGAAGTAGATCATATCAAAAGACAATTAGAATGGG 545566 30 100.0 36 .............................. ACGTCTGAACACCTGTATTTGAATCGAAATTAGCAG 545500 30 100.0 36 .............................. AGAGAAGTAATCTTCTTAGAATCAAATAAAATTATT 545434 30 100.0 37 .............................. TCGTTTTGCTCCTTTACATCGTCAAACCAAAATAGCA 545367 30 100.0 36 .............................. AGAGAAGTAATCTTCTTAGAATCAAATAAAATTATT 545301 30 100.0 37 .............................. TCGTTTTGCTCCTTTACATCGTCAAACCAAAATAGCA 545234 30 100.0 36 .............................. AGAGAAGTAATCTTCTTAGAATCAAATAAAATTATT 545168 30 100.0 37 .............................. TCGTTTTGCTCCTTTACATCGTCAAACCAAAATAGCA 545101 30 100.0 36 .............................. GAAGAAGTGGGGTTGAAAATTATTGGGAGGTTTTTT 545035 30 100.0 36 .............................. GCAGAAACTACAGCCCCTAATGCACTTAAATTTTCT 544969 30 100.0 36 .............................. AACTTCACTGCCTCGTTAAATGCAAAACCTAATCCA 544903 30 100.0 35 .............................. ATAAACCCTCCTTTTACAAGCTCACTAGCAGGAGA 544838 30 100.0 35 .............................. TTCCAGAATAATCACAGTTTTTTAACCCTGTAAAT 544773 30 100.0 37 .............................. ATACTCTTACTAGTTCTATCTATCTTAACTATTCCAT 544706 30 100.0 36 .............................. ATGTTATTATTTTCTTTCTTTACTTCTTTAGCACAA 544640 30 100.0 37 .............................. TTAGATAGAATACAGTTAAAAAGAACAGGTAATGTTA 544573 30 100.0 34 .............................. AGAAAGAGGTGCGGAGGTTATTACAGATAAACAA 544509 30 100.0 36 .............................. ATATCTGTGTTTAGGTTATTTTTTAGACTTACATTT 544443 30 100.0 37 .............................. ATAATTACATCTCCTTCATCTGTGAATATTTCTATTA 544376 30 100.0 37 .............................. ACATTTAATACTATGTCATTATCCTTAATGTACTCTT 544309 30 100.0 37 .............................. GCTAGTATAGCAGAAGACCCGACACCAGTTTCAATAA 544242 30 100.0 35 .............................. TTGATCACAACCCTGATAATGGCGAGATTATTATT 544177 30 100.0 36 .............................. ATTTTAATTTCACTCGCCTTAAAGCGACTATTCTTA 544111 30 100.0 36 .............................. GTATAGGTTCCTATATGTGTTTTACCCGCACTAACT 544045 30 100.0 37 .............................. ACATAAAACACATCAACAGGTTCTTCTTTAGGAATGA 543978 30 100.0 36 .............................. TAATGTGTCCCTTTTTTAGATAGAAAGGGGAACTAT 543912 30 100.0 36 .............................. CTGTTAGTCGGCTTCTCTATCCACAGTGGCTTCTTT 543846 30 100.0 37 .............................. ATGAGCATGAAAGCTTGTGTTTCATCGAGTTTAGCTT 543779 30 100.0 36 .............................. AAGATTAACTAAAAGATAGTTTTATCAAATTCAATT 543713 30 100.0 36 .............................. AGATTTAGGATTAAAAAAGGATTTAGAATCTCTAAA 543647 30 100.0 36 .............................. ATGGCTTGTTTAATGCCATTGTAGTTTTTATTTCCT 543581 30 100.0 37 .............................. TCCACTTTAAGGATTTGTTTTTTGATAACTTCTTTTC 543514 30 100.0 35 .............................. ATAGATATCAAAACAGATAAAAAAGACCCGTTAAA 543449 30 100.0 36 .............................. CTGGATGACCTTGCTCATCCAGTTCCTCCAGTATAA 543383 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 39 30 100.0 36 CTTTTAACTGCACCATATAGGTATTGAAAT # Left flank : AAGAGTATAAACCATTTAAAGCTCGTTGGTAATGTATGTGATTTTAGTATATGATATAGGGGAGAGGAGAGTAGGAAAGATGCTCAAACTATGTAGGCGTTATTTGAATTGGATACAGAACTCTGTCTTTGAAGGAGAGATTAGTGAAGTGAAATTAAAGGCACTATTAGCTGAAGCGAAAGAAATTATGAACAAAGAGGAGGACAGTGTAATTATTTTTAAAAGTAGAGAAGAAAGATGGCTTGAAAAACAAGTAGTAGGTAAAGAGAAGAATGAATTGGATAACTTCTTGTAGTCGTCGATGATTCAGCTCTCTTGAAAATTTGTTCTTTGAAATATCGTAATTAATGATTAGGTGTTGATAATTAGTTATTTATATGTTAGTCGCTCTAAGGGATAAAATCGGTTATTATAGAGCGACTAATTTTTGTGTTTAAAAAAGAAATAAATATATTTGTGAAGCCTTGTAAATAGGCTTTTTTATGTCGTGTATTTCACGG # Right flank : GTTAGACTCGGTGTTTGATTAGTTTTTAATGTTCCACTTTTAACTGCACCATATAGGTATTGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACTTTTAACTGCACCATATAGGTATTGAAATGTTAGACTCGGTGTTTGATTAGTTTTTAATGTTCCACTTTTAACTGCACCATATAGGTATTGAAATCTAAATAGCGCGTATGGAGTTGTAGCCGGAGCAACACTTTTAACTGCACCATATAGGTATTGAAATAGAAAAGCAAAAAGAGCAAAACAGACAGTTAGAGAACTTTTAACTGCACCATATAGGTATTGAAATAAGGCTGTTTGTTTTTTAGTCTGGAGGAAATTCACTTTTAACTGCACCATATAGGTATTGAAATAATGATGGTAACTCATTTTTTTGCACCAGATCCACTTTTAACT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTTAACTGCACCATATAGGTATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.00,-1.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [66.7-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.5 Confidence: HIGH] # Array family : NA //