Array 1 448153-451112 **** Predicted by CRISPRDetect 2.4 *** >NZ_MWJJ01000001.1 Clostridium sporogenes strain CLS_DGF_0088_06 CLSDGF008806_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================================================== ================== 448153 29 100.0 36 ............................. ATCTCTTACATCAATATAAGTAGGCATGTGAAGCCC 448218 29 100.0 37 ............................. AAGCCAACAAAAGTGGCTATTGGGGTTTGGGATAAGA 448284 29 100.0 37 ............................. TAGATGATTTTGGGAACATATCTTTTTTTATGCATTC 448350 29 100.0 37 ............................. ATTACCACATACTTTACTCATTTAATCACCTCTATTT 448416 29 100.0 38 ............................. CCATCTGTAAATAATAAAACTATGTTAGTTTATATTAA 448483 29 100.0 36 ............................. CAATTCTTCAGCAGCTATAGAGTCATAAACTTTACA 448548 29 100.0 40 ............................. CCCCGATACAGTTGGGGCGGGGAATTTATTAGGTTTGAAA 448617 29 100.0 72 ............................. TATCTTGTACAATCTATAAAATGGTTGTTCTTATCTGTTTATAAATTGCTTTTTAACATGCTCTTTTGGAGT 448718 29 100.0 38 ............................. CCCCTAGTGTAACTATTACACCACCCCTAGTGTAGATT 448785 29 100.0 36 ............................. TTAGATTTAACTAAACTATCAATTATCTCAGCTTCA 448850 29 100.0 38 ............................. TTACATTTTCTTTATATATTTTATATTTCTATATATTC 448917 29 100.0 37 ............................. TCTATCTTTAATGATATTATATCATTCATATTAGCCA 448983 29 100.0 37 ............................. TGTTGATTACCACCAACTTTTATTACATCAGCATTCC 449049 29 100.0 37 ............................. TTACTTTATTTTCTCTTTTATCACATTAATATCTTCT 449115 29 100.0 36 ............................. TTATATAAATATATTTATTGTGAAATCTTCCATTGC 449180 29 100.0 38 ............................. TAAAATGGTATATCTCCATCTTCTTCATTAAAATCTAC 449247 29 100.0 37 ............................. CCTCCATGTGAATTTATAAATTTTTGCATTTCATTTT 449313 29 100.0 37 ............................. AATACTTTAATAAGTATCTCTCTAACATCTGCTATTT 449379 29 100.0 37 ............................. GTAACTTTAACAGTTCCAGAAGCATAAGTGGCATCTT 449445 29 100.0 36 ............................. TCATAGAAGGCTACGGCTGCATTTGGGCTAGCATGA 449510 29 100.0 36 ............................. ATATATAAATATTCTAATATTTTTTCATGCTTATTA 449575 29 100.0 37 ............................. TTATCTATTGCGGTACTTCTTGCTGTGTCATCTGCTA 449641 29 100.0 36 ............................. ATGATTTAACTGTTACAAGAGGATTTGGTGGAACAA 449706 29 100.0 36 ............................. ATTATTGAAACACATTTTTCTTTATTCATAATTAAA 449771 29 100.0 37 ............................. TACTCTACCAGACTTTTTATAGTCTACACCTTCTATT 449837 29 100.0 36 ............................. TGGAACATTTCACAATTACTATTGATGCAGTACAAT 449902 29 100.0 37 ............................. CTATCTTCATATGCTAATACTTTTAAATGTTCTAGAT 449968 29 100.0 36 ............................. AAATCAGAATACATTCTTTTATCACTTTCAGATATT 450033 29 100.0 37 ............................. TAAACTTAGTTTTAGCGTGGAATCCATTTTGATTCAG 450099 29 100.0 37 ............................. TTAGAATGAATGGGTTTAGATATACTATAAAAGAAAA 450165 29 100.0 37 ............................. GAACAAATAAGAGATAAATTAGGAACTCTTATAGGTA 450231 29 100.0 37 ............................. GGGGAAATTAATATGAATGCATCAAAGGTTAAGGCTA 450297 29 100.0 36 ............................. AATGAAACAGCATGGAAAAATGGTACAGGTGGAATT 450362 29 100.0 35 ............................. ATAGTATCTATAAATTTAATTGTTACTGTATAATT 450426 29 100.0 38 ............................. TAGGGTGTACTTATTTTCTTACTAGAATCTTCCTGTTG 450493 29 96.6 36 .........................G... AGTGATGCGTTTTATGTTGTTTATAAATCAACCATT 450558 29 100.0 37 ............................. GATTATGTAGAAGCTTATAATTGGGGTAAAGTTCCTT 450624 29 100.0 37 ............................. AGCATAAAAAATAGTATAAATGACTTAACTAATGCTA 450690 29 100.0 37 ............................. AAAAACAATACAGTTATTAAATTAATAAAAATAAATT 450756 29 100.0 37 ............................. TTATTTTTTCACCTCTCTATTTAGTGACATGTTTTGA 450822 29 100.0 36 ............................. AAAGTCAATTCTGCTGAATTGTATGGAGATGATCAG 450887 29 100.0 36 ............................. GCATTAGCCATTAATCCAAGAGCAAAAGCAGTCTCT 450952 29 100.0 37 ............................. ATAGGTATATATCTAGGTACTTTTATACCTATAGTGT 451018 29 89.7 37 .............A......G..A..... CATGTTTCATCTATCATTAAAGCATGCTAAACAATGG 451084 29 82.8 0 A..C.............A.GA........ | ========== ====== ====== ====== ============================= ======================================================================== ================== 45 29 99.3 38 CTTTTATATTAACTATGTGATATGTAAAT # Left flank : AGGTGATGCTATATATAAACCATTAAAGGCTTGGTGGTGATAATTTATGTTTGTTATATTGACATATGATATAGAAGAAAAGAGAATTAATAGAGTTAGAAAAATGCTAAAAAAATACTTAGTTTGGACTCAAAATTCTGTGTTTGAGGGAGAAATAACAGAAGGAAAGCTACATAAATGCCTTTCTGATGTTAATAAATTAATTGACAAGAAGTTTGATTCAGTATATGTTTATAGAGTAAAAAATTCTAAAAATATAAAAAAGGATGTAGTTGGAATAGAAAAGAGTTTTGATGAATTATTTTTGTAATTAGTTTTGCATTAAACCTAAATTTAAATTAATTAAGGTTAAACTATTGAAATTACTAGCTTTCTTGACAATAAAAAATAAATACTAAAAACGCTACTGAAGGTTTACTGCAAAATGTGGAAAATATGATAGATTAAGCATTGCTATAAATACAGTAATGGCGGTGGTTACAGGCTTTTTGAATTTTAGG # Right flank : TCAATATGCTGTGAAGTCTTTTTTTGTTATACCAAGATTCTATATACTCAAATATTGAGAACCTAGCGGTATCAAAATCATAATATGTAGCTAAATTTACTTCTTCCTTCTTTAGTGAAGCGAGGAAGGGTTCAATGTAGGTATTATCATAAGGACAATTCTTACCGCTGAAAAGGTGAATTATATTAATTCCTTTAAATATGCTTAACTGTTATCAAGCTTAATTTAAGAGTTTTGGAAAGATTTATGCTAGATTGCTGTAAAATTAATAAAGGTAGAAAGAAGTCTGCCTTGATTTTATCTGCTTCTATAAGTTTGTATATTTATCCTATGAAGGATTTTAAAATTTATTATAGAATACTTAGTGTAGTTAATGAATGAAATTATACATAATCTAATAAATTTTTTCCTAAATAAAAAATAGTTATTTATTTAGGAAAATAAACAGGGGGTTATACTAATGAAGATAATAGTTATTGGACCTAGGGGAAAAATGGGGA # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:-0.05, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTTATATTAACTATGTGATATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:82.76%AT] # Reference repeat match prediction: F [matched GTTTTATATTAACTAAGTGGTATGTAAAG with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.00,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], //