Array 1 1793131-1789807 **** Predicted by CRISPRDetect 2.4 *** >NZ_AFIG01000001.1 Methylophaga aminisulfidivorans MP 54_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 1793130 29 100.0 32 ............................. TTATCCAGGTACGGGCTGGCTGTTTTCCCATC 1793069 29 100.0 32 ............................. GTTGCTGATCCGGATAGTAGTAGTAATGACAG 1793008 29 100.0 32 ............................. GACATTGAAAAACTAACGTTTCCGGATGGTAT 1792947 29 100.0 32 ............................. ATCAGTGTAAGAATCTTACGGTACTAACTTAC 1792886 29 100.0 32 ............................. GCGTCATCATTCTCTCGAATGGTGCTGAGATT 1792825 29 100.0 32 ............................. CTCAGGCACCGATCGTACTTCGGTGAGCTTGA 1792764 29 100.0 32 ............................. TATCAACCCACACCAGAAAACCCCAACGCCAC 1792703 29 100.0 32 ............................. TTACCTGGTCCTTTTGATTGTGCTACTTGCTC 1792642 29 100.0 32 ............................. ATGCTGTCATTCAAACTGCATCGACTGCTAAA 1792581 29 100.0 32 ............................. AAACGGTTCAAGCTTCCTATTTACTTTCAGGT 1792520 29 100.0 32 ............................. GCAATACCTACACATCCGTGGCAGATGCCTGC 1792459 29 100.0 32 ............................. GCGAGGACTCTAACCAGACTGAGCTACACACA 1792398 29 100.0 32 ............................. TGTTTGCCTGCTTCGTAAGAAATACGGAATAT 1792337 29 100.0 33 ............................. GCCATGCGGCATAACTTGTTTTGGCGTTTTCAC 1792275 29 100.0 32 ............................. ACCAAACCATCATCTTAGGTGAGTTCGTCGAG 1792214 29 100.0 32 ............................. ACAAGGGTGACCAGTGACGGTTCTATTCAAAC 1792153 29 100.0 32 ............................. TCTTTACCAATGGGTTTGGCACGCCTGTTCGC 1792092 29 100.0 32 ............................. TTGTGAGTTTCGTTCTCGACGAACTCACCTAA 1792031 29 100.0 32 ............................. CCATTAACATCGTTTACATCTAATGCATCCAA 1791970 29 100.0 32 ............................. GTCGACGCCACCTTCTGAGTTATCTTCGGCTC 1791909 29 100.0 32 ............................. ACGAAACACTCAAACTCATCCTGGATACATTC 1791848 29 100.0 32 ............................. TAACAAAAGACATTCGATAACAGCTTTCGGGG 1791787 29 100.0 32 ............................. CCTTCTGGCTTGAGTTGTCCATGTGTGTAAAC 1791726 29 100.0 32 ............................. CCTGTTCTATCCCTTATGGTCTATGATTCAAA 1791665 29 100.0 32 ............................. GTCAATAGGCAATTACAAGTAAATAGGTATAG 1791604 29 100.0 32 ............................. AATCAGAGCTTGCTGATATTCGTCAAAAAGTA 1791543 29 100.0 32 ............................. GTTTCTGTCTGTGTTGGCAATCCATTCATCAA 1791482 29 100.0 32 ............................. CAAAATGAACTCAGCCCCATTGCTATTGACAC 1791421 29 100.0 32 ............................. CGCCTTTTCATAGCTTGAGTGTTTATAAGTTG 1791360 29 100.0 32 ............................. GCGGATATCTGAATACACCGATAATTGTAGAC 1791299 29 100.0 32 ............................. GCAGTTTCCGTGGCGTAGTGTTTCAAACGAAT 1791238 29 100.0 32 ............................. CAGACGCAATTCAATACCAAGCTATATTAGAG 1791177 29 100.0 32 ............................. GACTATTAAAGAGTCCCAAAAACGGAACAGTA 1791116 29 100.0 32 ............................. GTGTCGTATCGAGAGGTGTGACGGGAAAATCG 1791055 29 100.0 32 ............................. CTTGGATATTCTGCAAACGAAGTTATTGATAT 1790994 29 100.0 32 ............................. GATGCTCTTATTGGTGAAATTGGTATCAGCTT 1790933 29 100.0 32 ............................. CTTCCCTCGTCTACATCAACAGCGTTCCAGGT 1790872 29 100.0 32 ............................. AGGATACCGTCGGTTCAACAATTCCTTATTGG 1790811 29 100.0 32 ............................. ACTGCTAAACGCGATGAATGCTATGCGTGATG 1790750 29 100.0 32 ............................. AAAATCATAGCCGGTGTTATTGGAGGCCTCAT 1790689 29 100.0 32 ............................. CCGTTACGCTCAGCCCAGATAGATGCAATATC 1790628 29 100.0 32 ............................. ACTGTGAAATTCGACCGAACAATCATCGTTTC 1790567 29 100.0 32 ............................. TTAAAAACAGAGTGGAAACGCATCGGTCGAAG 1790506 29 100.0 32 ............................. CGCATCTTCATAGGCTTGTTTTTTGCCCATAG 1790445 29 100.0 32 ............................. GCGACTACGACCTTGACCAATGGCTTGATTGG 1790384 29 100.0 32 ............................. TTTTTATTACATATTTCCATTGTTTCCGATAT 1790323 29 100.0 32 ............................. TGGTTAGGGAGATTCAGGCTGAGGCTGTTGAT 1790262 29 100.0 32 ............................. GAGAGGGGACACCTCCATTCTGTGAATATGCC 1790201 29 100.0 32 ............................. ATTCCGACGGAACAACAACCGTCTATTCTGAA 1790140 29 100.0 32 ............................. TTCTGTGGCGAGGCTTTTACCATCGACCATGA 1790079 29 100.0 32 ............................. GAGTGTGCATTAGGCTTCTCCTTTGATGTATT 1790018 29 96.6 32 ................A............ TCCATTTATTGACGCCTAAATGGTAGCGATTT 1789957 29 96.6 32 ...........A................. ACATTATCAGAGTTGAGGATTATGAGTGATGA 1789896 29 93.1 32 ..............T......G....... GTGCCACAAGGCAAAACTTAATAAGAGGATTT 1789835 29 86.2 0 ...........A...........T..G.T | ========== ====== ====== ====== ============================= ================================= ================== 55 29 99.5 32 GTGTTCCCCGTGCCCACGGGGATGAACCG # Left flank : AGAGGTGCTTGCTGCAGGTGAAATTTCGCCGCCTGAACCAGCCCCTGAGTCAGTACCTCCAGCGATACCCAATGCCGAACATATTGGTGATGAAGGTCATAGAAGTGAGTAAACAATGGCTATGACAGTCGTTGTCACTGAAAACATTCCTCCTAGACTGCGAGGGCGACTTGCTGTTTGGCTTTTGCAAGTCAGAGCTGGGGTTTACGTTGGTGATGTTTCCAGACGAATTAGAGAAATGATCTGGCAACAGTGTGAAGTGTTTTGTGATGAAGGCAATATCGTTATGGCATGGGCCACCAATACCGAATCAGGGTTTGATTTTCAAACGCTAGGACAAAATAGACGAATACCTATAGAAATGGATGGCTTAAGACTGGTTTCTTTTTTGCCCGTGGATGAAAAAGACGCTCTTTAACAAAATGGAAAATAAAACTATTTCAGTTGGTAGAAAATAAATTGTAGAAATTTATTTGGTAAATCAATTGTGTACAATAAGT # Right flank : GCAATCAAGTTCTATATAGCTCTGACGATGTATTGGTACATCGAGAATAAGTCTACAAATGCATTTAAAAAGAATGAAAAAATAGTTAATGGTTATATTTATTGCGTGTTGCGCAATGAGGTATTTTTATGAAATAATTATTACATGATTAAAAGTTTTAAACATAAAGGTCTAAAAAAATTTTTCCTAACAGGTAGCGTTGTTGGGATTCAACCAAACCACTCAGCAAGGTTGCGAGATATACTTGCATTTCTTGATACTGCTGATTGTATAGAAGATATGGACTTGCCCGGTTATCACCTGCACCCGTTAAAAGGGGATAGAGCAGGGGAACATTCAATAACGGTTTCCGGTAATTGGCGAATTGTTTTTGAGTTTATCGACGGTGACGCTTATTTAGTTAATTATGAGGATTATCACTAATGACTTTACAACAATTTAACCCACCCCATGTTGGCGAATTGATCCAACGTACATATATTGATCCCTTCGATAAGGTA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGTGCCCACGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGTGCCCACGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-9.70,-10.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [65.0-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //